Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3RKF:A9:A57
Extra
PDB:
ATOM 1 O3' A A 8 17.932 -13.484 -15.528 1.00 61.39 O
ATOM 2 P A A 9 16.481 -14.036 -15.101 1.00 56.57 P
ATOM 3 OP1 A A 9 15.668 -12.862 -14.706 1.00 40.22 O
ATOM 4 OP2 A A 9 16.695 -15.118 -14.111 1.00 60.97 O
ATOM 5 O5' A A 9 15.917 -14.651 -16.458 1.00 51.90 O
ATOM 6 C5' A A 9 16.348 -15.922 -16.918 1.00 51.65 C
ATOM 7 C4' A A 9 15.178 -16.808 -17.264 1.00 47.73 C
ATOM 8 O4' A A 9 14.557 -17.302 -16.050 1.00 51.16 O
ATOM 9 C3' A A 9 14.040 -16.140 -18.020 1.00 49.40 C
ATOM 10 O3' A A 9 14.291 -16.037 -19.412 1.00 50.64 O
ATOM 11 C2' A A 9 12.846 -17.025 -17.681 1.00 51.52 C
ATOM 12 O2' A A 9 12.836 -18.188 -18.495 1.00 51.04 O
ATOM 13 C1' A A 9 13.166 -17.443 -16.244 1.00 51.92 C
ATOM 14 N9 A A 9 12.464 -16.609 -15.248 1.00 55.88 N
ATOM 15 C8 A A 9 12.983 -15.615 -14.456 1.00 60.12 C
ATOM 16 N7 A A 9 12.105 -15.060 -13.655 1.00 60.91 N
ATOM 17 C5 A A 9 10.927 -15.742 -13.936 1.00 59.04 C
ATOM 18 C6 A A 9 9.623 -15.628 -13.420 1.00 59.89 C
ATOM 19 N6 A A 9 9.274 -14.749 -12.477 1.00 61.90 N
ATOM 20 N1 A A 9 8.677 -16.458 -13.913 1.00 55.13 N
ATOM 21 C2 A A 9 9.031 -17.337 -14.860 1.00 56.09 C
ATOM 22 N3 A A 9 10.221 -17.540 -15.423 1.00 49.28 N
ATOM 23 C4 A A 9 11.136 -16.701 -14.910 1.00 52.23 C
ATOM 24 P C A 10 14.262 -14.604 -20.142 1.00 49.22 P
ATOM 25 OP1 C A 10 13.931 -13.592 -19.109 1.00 39.91 O
ATOM 26 OP2 C A 10 13.373 -14.733 -21.323 1.00 46.61 O
ATOM 27 O5' C A 10 15.772 -14.419 -20.618 1.00 50.27 O
TER
ATOM 1 O3' C B 56 9.648 -7.402 -8.463 1.00 75.71 O
ATOM 2 P G B 57 10.162 -8.847 -7.983 1.00 79.79 P
ATOM 3 OP1 G B 57 10.027 -8.891 -6.506 1.00 75.42 O
ATOM 4 OP2 G B 57 11.503 -9.053 -8.582 1.00 66.27 O
ATOM 5 O5' G B 57 9.110 -9.840 -8.654 1.00 75.59 O
ATOM 6 C5' G B 57 7.750 -9.846 -8.240 1.00 73.17 C
ATOM 7 C4' G B 57 6.948 -10.904 -8.960 1.00 70.04 C
ATOM 8 O4' G B 57 6.820 -10.562 -10.363 1.00 68.97 O
ATOM 9 C3' G B 57 7.543 -12.304 -8.975 1.00 66.05 C
ATOM 10 O3' G B 57 7.310 -13.016 -7.774 1.00 64.60 O
ATOM 11 C2' G B 57 6.881 -12.936 -10.193 1.00 67.22 C
ATOM 12 O2' G B 57 5.570 -13.383 -9.879 1.00 62.45 O
ATOM 13 C1' G B 57 6.772 -11.739 -11.142 1.00 70.13 C
ATOM 14 N9 G B 57 7.872 -11.705 -12.122 1.00 67.25 N
ATOM 15 C8 G B 57 9.071 -11.044 -12.013 1.00 62.86 C
ATOM 16 N7 G B 57 9.836 -11.208 -13.056 1.00 65.35 N
ATOM 17 C5 G B 57 9.098 -12.021 -13.906 1.00 61.83 C
ATOM 18 C6 G B 57 9.406 -12.540 -15.191 1.00 62.28 C
ATOM 19 O6 G B 57 10.432 -12.377 -15.863 1.00 61.90 O
ATOM 20 N1 G B 57 8.371 -13.322 -15.694 1.00 59.88 N
ATOM 21 C2 G B 57 7.187 -13.575 -15.046 1.00 61.16 C
ATOM 22 N2 G B 57 6.306 -14.354 -15.692 1.00 60.21 N
ATOM 23 N3 G B 57 6.890 -13.098 -13.849 1.00 59.15 N
ATOM 24 C4 G B 57 7.882 -12.335 -13.344 1.00 60.87 C
ATOM 25 P A B 58 8.045 -14.422 -7.512 1.00 76.04 P
ATOM 26 OP1 A B 58 7.965 -14.691 -6.055 1.00 72.53 O
ATOM 27 OP2 A B 58 9.383 -14.337 -8.149 1.00 70.21 O
ATOM 28 O5' A B 58 7.131 -15.459 -8.306 1.00 63.20 O
TER
ATOM 2 P A A 9 16.481 -14.036 -15.101 1.00 56.57 P
ATOM 3 OP1 A A 9 15.668 -12.862 -14.706 1.00 40.22 O
ATOM 4 OP2 A A 9 16.695 -15.118 -14.111 1.00 60.97 O
ATOM 5 O5' A A 9 15.917 -14.651 -16.458 1.00 51.90 O
ATOM 6 C5' A A 9 16.348 -15.922 -16.918 1.00 51.65 C
ATOM 7 C4' A A 9 15.178 -16.808 -17.264 1.00 47.73 C
ATOM 8 O4' A A 9 14.557 -17.302 -16.050 1.00 51.16 O
ATOM 9 C3' A A 9 14.040 -16.140 -18.020 1.00 49.40 C
ATOM 10 O3' A A 9 14.291 -16.037 -19.412 1.00 50.64 O
ATOM 11 C2' A A 9 12.846 -17.025 -17.681 1.00 51.52 C
ATOM 12 O2' A A 9 12.836 -18.188 -18.495 1.00 51.04 O
ATOM 13 C1' A A 9 13.166 -17.443 -16.244 1.00 51.92 C
ATOM 14 N9 A A 9 12.464 -16.609 -15.248 1.00 55.88 N
ATOM 15 C8 A A 9 12.983 -15.615 -14.456 1.00 60.12 C
ATOM 16 N7 A A 9 12.105 -15.060 -13.655 1.00 60.91 N
ATOM 17 C5 A A 9 10.927 -15.742 -13.936 1.00 59.04 C
ATOM 18 C6 A A 9 9.623 -15.628 -13.420 1.00 59.89 C
ATOM 19 N6 A A 9 9.274 -14.749 -12.477 1.00 61.90 N
ATOM 20 N1 A A 9 8.677 -16.458 -13.913 1.00 55.13 N
ATOM 21 C2 A A 9 9.031 -17.337 -14.860 1.00 56.09 C
ATOM 22 N3 A A 9 10.221 -17.540 -15.423 1.00 49.28 N
ATOM 23 C4 A A 9 11.136 -16.701 -14.910 1.00 52.23 C
ATOM 24 P C A 10 14.262 -14.604 -20.142 1.00 49.22 P
ATOM 25 OP1 C A 10 13.931 -13.592 -19.109 1.00 39.91 O
ATOM 26 OP2 C A 10 13.373 -14.733 -21.323 1.00 46.61 O
ATOM 27 O5' C A 10 15.772 -14.419 -20.618 1.00 50.27 O
TER
ATOM 1 O3' C B 56 9.648 -7.402 -8.463 1.00 75.71 O
ATOM 2 P G B 57 10.162 -8.847 -7.983 1.00 79.79 P
ATOM 3 OP1 G B 57 10.027 -8.891 -6.506 1.00 75.42 O
ATOM 4 OP2 G B 57 11.503 -9.053 -8.582 1.00 66.27 O
ATOM 5 O5' G B 57 9.110 -9.840 -8.654 1.00 75.59 O
ATOM 6 C5' G B 57 7.750 -9.846 -8.240 1.00 73.17 C
ATOM 7 C4' G B 57 6.948 -10.904 -8.960 1.00 70.04 C
ATOM 8 O4' G B 57 6.820 -10.562 -10.363 1.00 68.97 O
ATOM 9 C3' G B 57 7.543 -12.304 -8.975 1.00 66.05 C
ATOM 10 O3' G B 57 7.310 -13.016 -7.774 1.00 64.60 O
ATOM 11 C2' G B 57 6.881 -12.936 -10.193 1.00 67.22 C
ATOM 12 O2' G B 57 5.570 -13.383 -9.879 1.00 62.45 O
ATOM 13 C1' G B 57 6.772 -11.739 -11.142 1.00 70.13 C
ATOM 14 N9 G B 57 7.872 -11.705 -12.122 1.00 67.25 N
ATOM 15 C8 G B 57 9.071 -11.044 -12.013 1.00 62.86 C
ATOM 16 N7 G B 57 9.836 -11.208 -13.056 1.00 65.35 N
ATOM 17 C5 G B 57 9.098 -12.021 -13.906 1.00 61.83 C
ATOM 18 C6 G B 57 9.406 -12.540 -15.191 1.00 62.28 C
ATOM 19 O6 G B 57 10.432 -12.377 -15.863 1.00 61.90 O
ATOM 20 N1 G B 57 8.371 -13.322 -15.694 1.00 59.88 N
ATOM 21 C2 G B 57 7.187 -13.575 -15.046 1.00 61.16 C
ATOM 22 N2 G B 57 6.306 -14.354 -15.692 1.00 60.21 N
ATOM 23 N3 G B 57 6.890 -13.098 -13.849 1.00 59.15 N
ATOM 24 C4 G B 57 7.882 -12.335 -13.344 1.00 60.87 C
ATOM 25 P A B 58 8.045 -14.422 -7.512 1.00 76.04 P
ATOM 26 OP1 A B 58 7.965 -14.691 -6.055 1.00 72.53 O
ATOM 27 OP2 A B 58 9.383 -14.337 -8.149 1.00 70.21 O
ATOM 28 O5' A B 58 7.131 -15.459 -8.306 1.00 63.20 O
TER
Atoms:
OP1: (15.668,-12.862,-14.706)
OP2: (16.695,-15.118,-14.111)
C3': (14.040,-16.140,-18.020)
C1': (13.166,-17.443,-16.244)
C5': (16.348,-15.922,-16.918)
O4': (14.557,-17.302,-16.050)
C8: (12.983,-15.615,-14.456)
O2': (12.836,-18.188,-18.495)
C6: (9.623,-15.628,-13.420)
C5: (10.927,-15.742,-13.936)
C4: (11.136,-16.701,-14.910)
P: (16.481,-14.036,-15.101)
C4': (15.178,-16.808,-17.264)
C2': (12.846,-17.025,-17.681)
C2: (9.031,-17.337,-14.860)
N1: (8.677,-16.458,-13.913)
N3: (10.221,-17.540,-15.423)
N6: (9.274,-14.749,-12.477)
N7: (12.105,-15.060,-13.655)
N9: (12.464,-16.609,-15.248)
O5': (15.917,-14.651,-16.458)
O3': (14.291,-16.037,-19.412)
OP2: (16.695,-15.118,-14.111)
C3': (14.040,-16.140,-18.020)
C1': (13.166,-17.443,-16.244)
C5': (16.348,-15.922,-16.918)
O4': (14.557,-17.302,-16.050)
C8: (12.983,-15.615,-14.456)
O2': (12.836,-18.188,-18.495)
C6: (9.623,-15.628,-13.420)
C5: (10.927,-15.742,-13.936)
C4: (11.136,-16.701,-14.910)
P: (16.481,-14.036,-15.101)
C4': (15.178,-16.808,-17.264)
C2': (12.846,-17.025,-17.681)
C2: (9.031,-17.337,-14.860)
N1: (8.677,-16.458,-13.913)
N3: (10.221,-17.540,-15.423)
N6: (9.274,-14.749,-12.477)
N7: (12.105,-15.060,-13.655)
N9: (12.464,-16.609,-15.248)
O5': (15.917,-14.651,-16.458)
O3': (14.291,-16.037,-19.412)
OP1: (10.027,-8.891,-6.506)
OP2: (11.503,-9.053,-8.582)
C3': (7.543,-12.304,-8.975)
C1': (6.772,-11.739,-11.142)
C5': (7.750,-9.846,-8.240)
O6: (10.432,-12.377,-15.863)
O4': (6.820,-10.562,-10.363)
C8: (9.071,-11.044,-12.013)
C2: (7.187,-13.575,-15.046)
C6: (9.406,-12.540,-15.191)
C5: (9.098,-12.021,-13.906)
C4: (7.882,-12.335,-13.344)
P: (10.162,-8.847,-7.983)
C4': (6.948,-10.904,-8.960)
C2': (6.881,-12.936,-10.193)
O2': (5.570,-13.383,-9.879)
N1: (8.371,-13.322,-15.694)
N2: (6.306,-14.354,-15.692)
N3: (6.890,-13.098,-13.849)
N7: (9.836,-11.208,-13.056)
N9: (7.872,-11.705,-12.122)
O5': (9.110,-9.840,-8.654)
O3': (7.310,-13.016,-7.774)
OP2: (11.503,-9.053,-8.582)
C3': (7.543,-12.304,-8.975)
C1': (6.772,-11.739,-11.142)
C5': (7.750,-9.846,-8.240)
O6: (10.432,-12.377,-15.863)
O4': (6.820,-10.562,-10.363)
C8: (9.071,-11.044,-12.013)
C2: (7.187,-13.575,-15.046)
C6: (9.406,-12.540,-15.191)
C5: (9.098,-12.021,-13.906)
C4: (7.882,-12.335,-13.344)
P: (10.162,-8.847,-7.983)
C4': (6.948,-10.904,-8.960)
C2': (6.881,-12.936,-10.193)
O2': (5.570,-13.383,-9.879)
N1: (8.371,-13.322,-15.694)
N2: (6.306,-14.354,-15.692)
N3: (6.890,-13.098,-13.849)
N7: (9.836,-11.208,-13.056)
N9: (7.872,-11.705,-12.122)
O5': (9.110,-9.840,-8.654)
O3': (7.310,-13.016,-7.774)
Image (generated by PyMOL):