ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1NUJ:C7:C8

Extra

PDB:
ATOM 1 O3' G A 6 17.642 21.671 25.764 1.00 25.63 O
ATOM 2 P A A 7 16.673 20.388 25.904 1.00 22.98 P
ATOM 3 OP1 A A 7 17.347 19.401 26.775 1.00 27.46 O
ATOM 4 OP2 A A 7 16.201 19.962 24.567 1.00 20.79 O
ATOM 5 O5' A A 7 15.512 21.020 26.784 1.00 20.31 O
ATOM 6 C5' A A 7 15.767 21.410 28.133 1.00 21.13 C
ATOM 7 C4' A A 7 14.577 22.148 28.699 1.00 21.29 C
ATOM 8 O4' A A 7 14.342 23.328 27.889 1.00 21.31 O
ATOM 9 C3' A A 7 13.282 21.341 28.618 1.00 19.08 C
ATOM 10 O3' A A 7 13.186 20.543 29.803 1.00 19.93 O
ATOM 11 C2' A A 7 12.227 22.445 28.521 1.00 23.27 C
ATOM 12 O2' A A 7 11.958 23.061 29.769 1.00 24.92 O
ATOM 13 C1' A A 7 12.952 23.473 27.648 1.00 21.39 C
ATOM 14 N9 A A 7 12.734 23.341 26.208 1.00 20.94 N
ATOM 15 C8 A A 7 13.637 22.928 25.265 1.00 18.54 C
ATOM 16 N7 A A 7 13.203 23.025 24.044 1.00 19.90 N
ATOM 17 C5 A A 7 11.913 23.515 24.185 1.00 20.74 C
ATOM 18 C6 A A 7 10.931 23.878 23.238 1.00 20.81 C
ATOM 19 N6 A A 7 11.120 23.806 21.912 1.00 21.00 N
ATOM 20 N1 A A 7 9.743 24.331 23.711 1.00 18.13 N
ATOM 21 C2 A A 7 9.571 24.410 25.041 1.00 17.42 C
ATOM 22 N3 A A 7 10.423 24.105 26.029 1.00 21.47 N
ATOM 23 C4 A A 7 11.596 23.673 25.516 1.00 20.67 C
ATOM 24 P G A 8 12.458 19.100 29.750 1.00 20.47 P
ATOM 25 OP1 G A 8 12.706 18.472 31.067 1.00 19.60 O
ATOM 26 OP2 G A 8 12.827 18.387 28.489 1.00 19.64 O
ATOM 27 O5' G A 8 10.901 19.415 29.636 1.00 23.09 O
TER

ATOM 1 O3' A B 7 13.186 20.543 29.803 1.00 19.93 O
ATOM 2 P G B 8 12.458 19.100 29.750 1.00 20.47 P
ATOM 3 OP1 G B 8 12.706 18.472 31.067 1.00 19.60 O
ATOM 4 OP2 G B 8 12.827 18.387 28.489 1.00 19.64 O
ATOM 5 O5' G B 8 10.901 19.415 29.636 1.00 23.09 O
ATOM 6 C5' G B 8 10.218 20.340 30.517 1.00 24.47 C
ATOM 7 C4' G B 8 8.835 20.600 29.949 1.00 23.12 C
ATOM 8 O4' G B 8 8.949 21.312 28.701 1.00 21.18 O
ATOM 9 C3' G B 8 8.095 19.290 29.654 1.00 22.29 C
ATOM 10 O3' G B 8 6.756 19.443 30.140 1.00 26.51 O
ATOM 11 C2' G B 8 7.958 19.265 28.133 1.00 21.38 C
ATOM 12 O2' G B 8 6.844 18.669 27.528 1.00 22.21 O
ATOM 13 C1' G B 8 8.044 20.745 27.804 1.00 22.24 C
ATOM 14 N9 G B 8 8.378 21.054 26.429 1.00 20.37 N
ATOM 15 C8 G B 8 7.538 21.672 25.530 1.00 20.28 C
ATOM 16 N7 G B 8 7.996 21.667 24.315 1.00 20.30 N
ATOM 17 C5 G B 8 9.233 21.039 24.427 1.00 21.58 C
ATOM 18 C6 G B 8 10.165 20.733 23.436 1.00 20.50 C
ATOM 19 O6 G B 8 10.070 20.938 22.208 1.00 21.02 O
ATOM 20 N1 G B 8 11.296 20.118 23.972 1.00 19.29 N
ATOM 21 C2 G B 8 11.491 19.835 25.311 1.00 20.73 C
ATOM 22 N2 G B 8 12.651 19.245 25.630 1.00 20.38 N
ATOM 23 N3 G B 8 10.604 20.109 26.259 1.00 22.27 N
ATOM 24 C4 G B 8 9.501 20.705 25.742 1.00 21.16 C
ATOM 25 P C B 9 6.243 18.678 31.435 1.00 22.89 P
ATOM 26 OP1 C B 9 4.828 19.130 31.564 1.00 28.35 O
ATOM 27 OP2 C B 9 7.182 18.901 32.569 1.00 23.55 O
ATOM 28 O5' C B 9 6.237 17.153 31.021 1.00 20.60 O
TER

Atoms:
OP1: (17.347,19.401,26.775)
OP2: (16.201,19.962,24.567)
C3': (13.282,21.341,28.618)
C1': (12.952,23.473,27.648)
C5': (15.767,21.410,28.133)
O4': (14.342,23.328,27.889)
C8: (13.637,22.928,25.265)
O2': (11.958,23.061,29.769)
C6: (10.931,23.878,23.238)
C5: (11.913,23.515,24.185)
C4: (11.596,23.673,25.516)
P: (16.673,20.388,25.904)
C4': (14.577,22.148,28.699)
C2': (12.227,22.445,28.521)
C2: (9.571,24.410,25.041)
N1: (9.743,24.331,23.711)
N3: (10.423,24.105,26.029)
N6: (11.120,23.806,21.912)
N7: (13.203,23.025,24.044)
N9: (12.734,23.341,26.208)
O5': (15.512,21.020,26.784)
O3': (13.186,20.543,29.803)
OP1: (12.706,18.472,31.067)
OP2: (12.827,18.387,28.489)
C3': (8.095,19.290,29.654)
C1': (8.044,20.745,27.804)
C5': (10.218,20.340,30.517)
O6: (10.070,20.938,22.208)
O4': (8.949,21.312,28.701)
C8: (7.538,21.672,25.530)
C2: (11.491,19.835,25.311)
C6: (10.165,20.733,23.436)
C5: (9.233,21.039,24.427)
C4: (9.501,20.705,25.742)
P: (12.458,19.100,29.750)
C4': (8.835,20.600,29.949)
C2': (7.958,19.265,28.133)
O2': (6.844,18.669,27.528)
N1: (11.296,20.118,23.972)
N2: (12.651,19.245,25.630)
N3: (10.604,20.109,26.259)
N7: (7.996,21.667,24.315)
N9: (8.378,21.054,26.429)
O5': (10.901,19.415,29.636)
O3': (6.756,19.443,30.140)
Image (generated by PyMOL):
PyMOL image
show in jmol