ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1XMQ:A861:A860

Extra

PDB:
ATOM 1 O3' G A 860 175.474 85.327 -21.282 1.00 48.17 O
ATOM 2 P A A 861 175.051 84.916 -22.767 1.00 56.33 P
ATOM 3 OP1 A A 861 173.771 84.176 -22.664 1.00 39.45 O
ATOM 4 OP2 A A 861 176.210 84.284 -23.430 1.00 39.45 O
ATOM 5 O5' A A 861 174.770 86.310 -23.477 1.00 56.33 O
ATOM 6 C5' A A 861 174.755 86.416 -24.905 1.00 56.33 C
ATOM 7 C4' A A 861 173.701 87.397 -25.341 1.00 56.33 C
ATOM 8 O4' A A 861 172.388 86.847 -25.057 1.00 56.33 O
ATOM 9 C3' A A 861 173.752 88.774 -24.678 1.00 56.33 C
ATOM 10 O3' A A 861 173.340 89.762 -25.618 1.00 56.33 O
ATOM 11 C2' A A 861 172.658 88.684 -23.620 1.00 56.33 C
ATOM 12 O2' A A 861 172.096 89.952 -23.358 1.00 56.33 O
ATOM 13 C1' A A 861 171.638 87.787 -24.321 1.00 56.33 C
ATOM 14 N9 A A 861 170.720 87.065 -23.449 1.00 39.45 N
ATOM 15 C8 A A 861 170.985 85.979 -22.662 1.00 39.45 C
ATOM 16 N7 A A 861 169.943 85.534 -22.005 1.00 39.45 N
ATOM 17 C5 A A 861 168.924 86.390 -22.382 1.00 39.45 C
ATOM 18 C6 A A 861 167.572 86.443 -22.037 1.00 39.45 C
ATOM 19 N6 A A 861 166.993 85.576 -21.209 1.00 39.45 N
ATOM 20 N1 A A 861 166.821 87.422 -22.582 1.00 39.45 N
ATOM 21 C2 A A 861 167.408 88.276 -23.428 1.00 39.45 C
ATOM 22 N3 A A 861 168.674 88.322 -23.838 1.00 39.45 N
ATOM 23 C4 A A 861 169.388 87.340 -23.268 1.00 39.45 C
ATOM 24 P G A 862 174.415 90.450 -26.587 1.00 57.71 P
ATOM 25 OP1 G A 862 175.266 89.352 -27.122 1.00 56.76 O
ATOM 26 OP2 G A 862 175.049 91.595 -25.895 1.00 56.76 O
ATOM 27 O5' G A 862 173.506 91.049 -27.748 1.00 57.71 O
TER

ATOM 1 O3' G B 859 176.087 91.447 -19.914 1.00 58.30 O
ATOM 2 P G B 860 175.777 90.546 -21.217 1.00 48.17 P
ATOM 3 OP1 G B 860 177.071 90.333 -21.915 1.00 47.46 O
ATOM 4 OP2 G B 860 174.634 91.148 -21.964 1.00 47.46 O
ATOM 5 O5' G B 860 175.280 89.144 -20.631 1.00 48.17 O
ATOM 6 C5' G B 860 176.196 88.242 -19.991 1.00 48.17 C
ATOM 7 C4' G B 860 175.476 87.001 -19.517 1.00 48.17 C
ATOM 8 O4' G B 860 174.507 87.363 -18.507 1.00 48.17 O
ATOM 9 C3' G B 860 174.675 86.241 -20.561 1.00 48.17 C
ATOM 10 O3' G B 860 175.474 85.327 -21.282 1.00 48.17 O
ATOM 11 C2' G B 860 173.637 85.514 -19.721 1.00 48.17 C
ATOM 12 O2' G B 860 174.147 84.337 -19.136 1.00 48.17 O
ATOM 13 C1' G B 860 173.356 86.543 -18.627 1.00 48.17 C
ATOM 14 N9 G B 860 172.232 87.401 -18.991 1.00 47.46 N
ATOM 15 C8 G B 860 172.296 88.612 -19.637 1.00 47.46 C
ATOM 16 N7 G B 860 171.125 89.135 -19.858 1.00 47.46 N
ATOM 17 C5 G B 860 170.237 88.220 -19.318 1.00 47.46 C
ATOM 18 C6 G B 860 168.839 88.250 -19.259 1.00 47.46 C
ATOM 19 O6 G B 860 168.074 89.122 -19.694 1.00 47.46 O
ATOM 20 N1 G B 860 168.331 87.124 -18.618 1.00 47.46 N
ATOM 21 C2 G B 860 169.087 86.104 -18.104 1.00 47.46 C
ATOM 22 N2 G B 860 168.428 85.105 -17.512 1.00 47.46 N
ATOM 23 N3 G B 860 170.398 86.067 -18.162 1.00 47.46 N
ATOM 24 C4 G B 860 170.904 87.149 -18.777 1.00 47.46 C
ATOM 25 P A B 861 175.051 84.916 -22.767 1.00 56.33 P
ATOM 26 OP1 A B 861 173.771 84.176 -22.664 1.00 39.45 O
ATOM 27 OP2 A B 861 176.210 84.284 -23.430 1.00 39.45 O
ATOM 28 O5' A B 861 174.770 86.310 -23.477 1.00 56.33 O
TER

Atoms:
OP1: (173.771,84.176,-22.664)
OP2: (176.210,84.284,-23.430)
C3': (173.752,88.774,-24.678)
C1': (171.638,87.787,-24.321)
C5': (174.755,86.416,-24.905)
O4': (172.388,86.847,-25.057)
C8: (170.985,85.979,-22.662)
O2': (172.096,89.952,-23.358)
C6: (167.572,86.443,-22.037)
C5: (168.924,86.390,-22.382)
C4: (169.388,87.340,-23.268)
P: (175.051,84.916,-22.767)
C4': (173.701,87.397,-25.341)
C2': (172.658,88.684,-23.620)
C2: (167.408,88.276,-23.428)
N1: (166.821,87.422,-22.582)
N3: (168.674,88.322,-23.838)
N6: (166.993,85.576,-21.209)
N7: (169.943,85.534,-22.005)
N9: (170.720,87.065,-23.449)
O5': (174.770,86.310,-23.477)
O3': (173.340,89.762,-25.618)
OP1: (177.071,90.333,-21.915)
OP2: (174.634,91.148,-21.964)
C3': (174.675,86.241,-20.561)
C1': (173.356,86.543,-18.627)
C5': (176.196,88.242,-19.991)
O6: (168.074,89.122,-19.694)
O4': (174.507,87.363,-18.507)
C8: (172.296,88.612,-19.637)
C2: (169.087,86.104,-18.104)
C6: (168.839,88.250,-19.259)
C5: (170.237,88.220,-19.318)
C4: (170.904,87.149,-18.777)
P: (175.777,90.546,-21.217)
C4': (175.476,87.001,-19.517)
C2': (173.637,85.514,-19.721)
O2': (174.147,84.337,-19.136)
N1: (168.331,87.124,-18.618)
N2: (168.428,85.105,-17.512)
N3: (170.398,86.067,-18.162)
N7: (171.125,89.135,-19.858)
N9: (172.232,87.401,-18.991)
O5': (175.280,89.144,-20.631)
O3': (175.474,85.327,-21.282)
Image (generated by PyMOL):
PyMOL image
show in jmol