Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:049:046
Extra
PDB:
ATOM 1 O3' C A 48 49.384 170.032 45.410 1.00 62.37 O
ATOM 2 P A A 49 50.735 169.173 45.325 1.00 64.88 P
ATOM 3 OP1 A A 49 51.437 169.365 46.631 1.00 64.85 O
ATOM 4 OP2 A A 49 51.434 169.505 44.051 1.00 64.23 O
ATOM 5 O5' A A 49 50.223 167.668 45.210 1.00 63.10 O
ATOM 6 C5' A A 49 49.616 167.014 46.334 1.00 58.85 C
ATOM 7 C4' A A 49 49.844 165.524 46.262 1.00 57.07 C
ATOM 8 O4' A A 49 48.798 164.901 45.471 1.00 56.28 O
ATOM 9 C3' A A 49 51.177 165.057 45.676 1.00 55.13 C
ATOM 10 O3' A A 49 51.704 163.987 46.457 1.00 54.46 O
ATOM 11 C2' A A 49 50.770 164.546 44.294 1.00 54.77 C
ATOM 12 O2' A A 49 51.618 163.523 43.823 1.00 54.98 O
ATOM 13 C1' A A 49 49.379 163.986 44.576 1.00 54.60 C
ATOM 14 N9 A A 49 48.495 163.857 43.419 1.00 55.45 N
ATOM 15 C8 A A 49 48.359 164.705 42.351 1.00 56.00 C
ATOM 16 N7 A A 49 47.485 164.301 41.462 1.00 57.22 N
ATOM 17 C5 A A 49 47.007 163.106 41.981 1.00 57.63 C
ATOM 18 C6 A A 49 46.060 162.174 41.507 1.00 58.38 C
ATOM 19 N6 A A 49 45.411 162.296 40.344 1.00 57.48 N
ATOM 20 N1 A A 49 45.806 161.092 42.276 1.00 57.97 N
ATOM 21 C2 A A 49 46.470 160.957 43.428 1.00 56.52 C
ATOM 22 N3 A A 49 47.388 161.752 43.972 1.00 57.17 N
ATOM 23 C4 A A 49 47.615 162.824 43.191 1.00 57.15 C
ATOM 24 P A A 50 53.164 164.127 47.125 1.00 51.89 P
ATOM 25 OP1 A A 50 53.114 165.227 48.118 1.00 51.02 O
ATOM 26 OP2 A A 50 54.175 164.155 46.041 1.00 52.66 O
ATOM 27 O5' A A 50 53.348 162.757 47.899 1.00 50.07 O
TER
ATOM 1 O3' U B 45 55.508 165.455 36.040 1.00 48.91 O
ATOM 2 P G B 46 54.516 166.392 36.884 1.00 50.06 P
ATOM 3 OP1 G B 46 54.184 167.570 36.045 1.00 50.06 O
ATOM 4 OP2 G B 46 55.089 166.597 38.233 1.00 50.20 O
ATOM 5 O5' G B 46 53.192 165.522 37.006 1.00 50.55 O
ATOM 6 C5' G B 46 52.491 165.118 35.829 1.00 49.74 C
ATOM 7 C4' G B 46 51.008 165.211 36.049 1.00 50.26 C
ATOM 8 O4' G B 46 50.584 164.113 36.896 1.00 52.20 O
ATOM 9 C3' G B 46 50.492 166.484 36.708 1.00 50.28 C
ATOM 10 O3' G B 46 49.227 166.793 36.137 1.00 52.60 O
ATOM 11 C2' G B 46 50.307 166.050 38.160 1.00 49.11 C
ATOM 12 O2' G B 46 49.318 166.791 38.836 1.00 47.14 O
ATOM 13 C1' G B 46 49.826 164.615 37.973 1.00 51.43 C
ATOM 14 N9 G B 46 49.975 163.702 39.105 1.00 54.04 N
ATOM 15 C8 G B 46 50.684 163.901 40.270 1.00 54.42 C
ATOM 16 N7 G B 46 50.614 162.889 41.092 1.00 53.77 N
ATOM 17 C5 G B 46 49.815 161.963 40.432 1.00 54.26 C
ATOM 18 C6 G B 46 49.387 160.673 40.827 1.00 53.59 C
ATOM 19 O6 G B 46 49.638 160.066 41.871 1.00 54.02 O
ATOM 20 N1 G B 46 48.586 160.080 39.856 1.00 54.66 N
ATOM 21 C2 G B 46 48.245 160.649 38.656 1.00 54.30 C
ATOM 22 N2 G B 46 47.472 159.911 37.851 1.00 53.24 N
ATOM 23 N3 G B 46 48.636 161.850 38.274 1.00 54.41 N
ATOM 24 C4 G B 46 49.413 162.448 39.205 1.00 54.31 C
ATOM 25 P C B 47 48.998 168.215 35.426 1.00 52.45 P
ATOM 26 OP1 C B 47 47.709 168.165 34.687 1.00 52.89 O
ATOM 27 OP2 C B 47 50.247 168.551 34.703 1.00 51.89 O
ATOM 28 O5' C B 47 48.822 169.229 36.638 1.00 51.76 O
TER
ATOM 2 P A A 49 50.735 169.173 45.325 1.00 64.88 P
ATOM 3 OP1 A A 49 51.437 169.365 46.631 1.00 64.85 O
ATOM 4 OP2 A A 49 51.434 169.505 44.051 1.00 64.23 O
ATOM 5 O5' A A 49 50.223 167.668 45.210 1.00 63.10 O
ATOM 6 C5' A A 49 49.616 167.014 46.334 1.00 58.85 C
ATOM 7 C4' A A 49 49.844 165.524 46.262 1.00 57.07 C
ATOM 8 O4' A A 49 48.798 164.901 45.471 1.00 56.28 O
ATOM 9 C3' A A 49 51.177 165.057 45.676 1.00 55.13 C
ATOM 10 O3' A A 49 51.704 163.987 46.457 1.00 54.46 O
ATOM 11 C2' A A 49 50.770 164.546 44.294 1.00 54.77 C
ATOM 12 O2' A A 49 51.618 163.523 43.823 1.00 54.98 O
ATOM 13 C1' A A 49 49.379 163.986 44.576 1.00 54.60 C
ATOM 14 N9 A A 49 48.495 163.857 43.419 1.00 55.45 N
ATOM 15 C8 A A 49 48.359 164.705 42.351 1.00 56.00 C
ATOM 16 N7 A A 49 47.485 164.301 41.462 1.00 57.22 N
ATOM 17 C5 A A 49 47.007 163.106 41.981 1.00 57.63 C
ATOM 18 C6 A A 49 46.060 162.174 41.507 1.00 58.38 C
ATOM 19 N6 A A 49 45.411 162.296 40.344 1.00 57.48 N
ATOM 20 N1 A A 49 45.806 161.092 42.276 1.00 57.97 N
ATOM 21 C2 A A 49 46.470 160.957 43.428 1.00 56.52 C
ATOM 22 N3 A A 49 47.388 161.752 43.972 1.00 57.17 N
ATOM 23 C4 A A 49 47.615 162.824 43.191 1.00 57.15 C
ATOM 24 P A A 50 53.164 164.127 47.125 1.00 51.89 P
ATOM 25 OP1 A A 50 53.114 165.227 48.118 1.00 51.02 O
ATOM 26 OP2 A A 50 54.175 164.155 46.041 1.00 52.66 O
ATOM 27 O5' A A 50 53.348 162.757 47.899 1.00 50.07 O
TER
ATOM 1 O3' U B 45 55.508 165.455 36.040 1.00 48.91 O
ATOM 2 P G B 46 54.516 166.392 36.884 1.00 50.06 P
ATOM 3 OP1 G B 46 54.184 167.570 36.045 1.00 50.06 O
ATOM 4 OP2 G B 46 55.089 166.597 38.233 1.00 50.20 O
ATOM 5 O5' G B 46 53.192 165.522 37.006 1.00 50.55 O
ATOM 6 C5' G B 46 52.491 165.118 35.829 1.00 49.74 C
ATOM 7 C4' G B 46 51.008 165.211 36.049 1.00 50.26 C
ATOM 8 O4' G B 46 50.584 164.113 36.896 1.00 52.20 O
ATOM 9 C3' G B 46 50.492 166.484 36.708 1.00 50.28 C
ATOM 10 O3' G B 46 49.227 166.793 36.137 1.00 52.60 O
ATOM 11 C2' G B 46 50.307 166.050 38.160 1.00 49.11 C
ATOM 12 O2' G B 46 49.318 166.791 38.836 1.00 47.14 O
ATOM 13 C1' G B 46 49.826 164.615 37.973 1.00 51.43 C
ATOM 14 N9 G B 46 49.975 163.702 39.105 1.00 54.04 N
ATOM 15 C8 G B 46 50.684 163.901 40.270 1.00 54.42 C
ATOM 16 N7 G B 46 50.614 162.889 41.092 1.00 53.77 N
ATOM 17 C5 G B 46 49.815 161.963 40.432 1.00 54.26 C
ATOM 18 C6 G B 46 49.387 160.673 40.827 1.00 53.59 C
ATOM 19 O6 G B 46 49.638 160.066 41.871 1.00 54.02 O
ATOM 20 N1 G B 46 48.586 160.080 39.856 1.00 54.66 N
ATOM 21 C2 G B 46 48.245 160.649 38.656 1.00 54.30 C
ATOM 22 N2 G B 46 47.472 159.911 37.851 1.00 53.24 N
ATOM 23 N3 G B 46 48.636 161.850 38.274 1.00 54.41 N
ATOM 24 C4 G B 46 49.413 162.448 39.205 1.00 54.31 C
ATOM 25 P C B 47 48.998 168.215 35.426 1.00 52.45 P
ATOM 26 OP1 C B 47 47.709 168.165 34.687 1.00 52.89 O
ATOM 27 OP2 C B 47 50.247 168.551 34.703 1.00 51.89 O
ATOM 28 O5' C B 47 48.822 169.229 36.638 1.00 51.76 O
TER
Atoms:
OP1: (51.437,169.365,46.631)
OP2: (51.434,169.505,44.051)
C3': (51.177,165.057,45.676)
C1': (49.379,163.986,44.576)
C5': (49.616,167.014,46.334)
O4': (48.798,164.901,45.471)
C8: (48.359,164.705,42.351)
O2': (51.618,163.523,43.823)
C6: (46.060,162.174,41.507)
C5: (47.007,163.106,41.981)
C4: (47.615,162.824,43.191)
P: (50.735,169.173,45.325)
C4': (49.844,165.524,46.262)
C2': (50.770,164.546,44.294)
C2: (46.470,160.957,43.428)
N1: (45.806,161.092,42.276)
N3: (47.388,161.752,43.972)
N6: (45.411,162.296,40.344)
N7: (47.485,164.301,41.462)
N9: (48.495,163.857,43.419)
O5': (50.223,167.668,45.210)
O3': (51.704,163.987,46.457)
OP2: (51.434,169.505,44.051)
C3': (51.177,165.057,45.676)
C1': (49.379,163.986,44.576)
C5': (49.616,167.014,46.334)
O4': (48.798,164.901,45.471)
C8: (48.359,164.705,42.351)
O2': (51.618,163.523,43.823)
C6: (46.060,162.174,41.507)
C5: (47.007,163.106,41.981)
C4: (47.615,162.824,43.191)
P: (50.735,169.173,45.325)
C4': (49.844,165.524,46.262)
C2': (50.770,164.546,44.294)
C2: (46.470,160.957,43.428)
N1: (45.806,161.092,42.276)
N3: (47.388,161.752,43.972)
N6: (45.411,162.296,40.344)
N7: (47.485,164.301,41.462)
N9: (48.495,163.857,43.419)
O5': (50.223,167.668,45.210)
O3': (51.704,163.987,46.457)
OP1: (54.184,167.570,36.045)
OP2: (55.089,166.597,38.233)
C3': (50.492,166.484,36.708)
C1': (49.826,164.615,37.973)
C5': (52.491,165.118,35.829)
O6: (49.638,160.066,41.871)
O4': (50.584,164.113,36.896)
C8: (50.684,163.901,40.270)
C2: (48.245,160.649,38.656)
C6: (49.387,160.673,40.827)
C5: (49.815,161.963,40.432)
C4: (49.413,162.448,39.205)
P: (54.516,166.392,36.884)
C4': (51.008,165.211,36.049)
C2': (50.307,166.050,38.160)
O2': (49.318,166.791,38.836)
N1: (48.586,160.080,39.856)
N2: (47.472,159.911,37.851)
N3: (48.636,161.850,38.274)
N7: (50.614,162.889,41.092)
N9: (49.975,163.702,39.105)
O5': (53.192,165.522,37.006)
O3': (49.227,166.793,36.137)
OP2: (55.089,166.597,38.233)
C3': (50.492,166.484,36.708)
C1': (49.826,164.615,37.973)
C5': (52.491,165.118,35.829)
O6: (49.638,160.066,41.871)
O4': (50.584,164.113,36.896)
C8: (50.684,163.901,40.270)
C2: (48.245,160.649,38.656)
C6: (49.387,160.673,40.827)
C5: (49.815,161.963,40.432)
C4: (49.413,162.448,39.205)
P: (54.516,166.392,36.884)
C4': (51.008,165.211,36.049)
C2': (50.307,166.050,38.160)
O2': (49.318,166.791,38.836)
N1: (48.586,160.080,39.856)
N2: (47.472,159.911,37.851)
N3: (48.636,161.850,38.274)
N7: (50.614,162.889,41.092)
N9: (49.975,163.702,39.105)
O5': (53.192,165.522,37.006)
O3': (49.227,166.793,36.137)
Image (generated by PyMOL):