Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12997:12993
Extra
PDB:
ATOM 1 O3' A A2996 61.412 47.452 20.837 1.00 50.23 O
ATOM 2 P A A2997 62.328 48.747 20.943 1.00 53.65 P
ATOM 3 OP1 A A2997 63.367 48.473 21.951 1.00 53.35 O
ATOM 4 OP2 A A2997 61.439 49.902 21.134 1.00 53.97 O
ATOM 5 O5' A A2997 62.982 48.799 19.500 1.00 54.06 O
ATOM 6 C5' A A2997 62.908 49.958 18.714 1.00 54.65 C
ATOM 7 C4' A A2997 62.251 49.674 17.415 1.00 54.87 C
ATOM 8 O4' A A2997 61.268 50.681 17.201 1.00 55.25 O
ATOM 9 C3' A A2997 63.154 49.724 16.195 1.00 55.26 C
ATOM 10 O3' A A2997 63.630 48.456 15.838 1.00 54.94 O
ATOM 11 C2' A A2997 62.290 50.351 15.113 1.00 55.75 C
ATOM 12 O2' A A2997 61.500 49.360 14.464 1.00 55.57 O
ATOM 13 C1' A A2997 61.370 51.226 15.914 1.00 55.80 C
ATOM 14 N9 A A2997 61.834 52.605 16.052 1.00 56.27 N
ATOM 15 C8 A A2997 62.463 53.134 17.145 1.00 56.18 C
ATOM 16 N7 A A2997 62.693 54.410 17.084 1.00 56.67 N
ATOM 17 C5 A A2997 62.111 54.730 15.869 1.00 57.11 C
ATOM 18 C6 A A2997 61.978 55.944 15.200 1.00 57.75 C
ATOM 19 N6 A A2997 62.456 57.064 15.704 1.00 58.05 N
ATOM 20 N1 A A2997 61.339 55.958 14.017 1.00 58.07 N
ATOM 21 C2 A A2997 60.858 54.816 13.521 1.00 57.78 C
ATOM 22 N3 A A2997 60.916 53.605 14.047 1.00 57.17 N
ATOM 23 C4 A A2997 61.554 53.637 15.233 1.00 56.86 C
ATOM 24 P G A2998 64.754 48.303 14.710 1.00 69.81 P
ATOM 25 OP1 G A2998 64.316 49.041 13.522 1.00 70.38 O
ATOM 26 OP2 G A2998 65.044 46.854 14.575 1.00 69.38 O
ATOM 27 O5' G A2998 65.978 49.046 15.358 1.00 69.93 O
TER
ATOM 1 O3' C B2992 60.736 56.402 6.121 1.00 72.58 O
ATOM 2 P G B2993 59.801 56.711 7.374 1.00 60.55 P
ATOM 3 OP1 G B2993 58.391 56.752 6.894 1.00 60.71 O
ATOM 4 OP2 G B2993 60.361 57.926 8.024 1.00 60.81 O
ATOM 5 O5' G B2993 60.042 55.428 8.322 1.00 59.75 O
ATOM 6 C5' G B2993 59.680 54.106 7.915 1.00 59.39 C
ATOM 7 C4' G B2993 60.385 53.041 8.746 1.00 58.74 C
ATOM 8 O4' G B2993 61.814 53.288 8.763 1.00 58.85 O
ATOM 9 C3' G B2993 60.038 52.977 10.231 1.00 58.23 C
ATOM 10 O3' G B2993 58.793 52.365 10.504 1.00 57.91 O
ATOM 11 C2' G B2993 61.212 52.206 10.779 1.00 57.81 C
ATOM 12 O2' G B2993 61.126 50.849 10.398 1.00 57.45 O
ATOM 13 C1' G B2993 62.355 52.840 9.995 1.00 58.31 C
ATOM 14 N9 G B2993 62.930 53.986 10.733 1.00 58.51 N
ATOM 15 C8 G B2993 62.757 55.330 10.528 1.00 59.07 C
ATOM 16 N7 G B2993 63.398 56.060 11.407 1.00 59.09 N
ATOM 17 C5 G B2993 64.005 55.154 12.259 1.00 58.52 C
ATOM 18 C6 G B2993 64.809 55.363 13.397 1.00 58.29 C
ATOM 19 O6 G B2993 65.197 56.394 13.925 1.00 58.54 O
ATOM 20 N1 G B2993 65.189 54.187 13.967 1.00 57.70 N
ATOM 21 C2 G B2993 64.864 52.955 13.490 1.00 57.38 C
ATOM 22 N2 G B2993 65.381 51.933 14.206 1.00 56.83 N
ATOM 23 N3 G B2993 64.117 52.740 12.420 1.00 57.58 N
ATOM 24 C4 G B2993 63.717 53.880 11.860 1.00 58.15 C
ATOM 25 P G B2994 57.506 53.268 10.814 1.00 63.48 P
ATOM 26 OP1 G B2994 56.376 52.690 10.059 1.00 63.50 O
ATOM 27 OP2 G B2994 57.892 54.672 10.564 1.00 64.08 O
ATOM 28 O5' G B2994 57.287 53.057 12.357 1.00 62.92 O
TER
ATOM 2 P A A2997 62.328 48.747 20.943 1.00 53.65 P
ATOM 3 OP1 A A2997 63.367 48.473 21.951 1.00 53.35 O
ATOM 4 OP2 A A2997 61.439 49.902 21.134 1.00 53.97 O
ATOM 5 O5' A A2997 62.982 48.799 19.500 1.00 54.06 O
ATOM 6 C5' A A2997 62.908 49.958 18.714 1.00 54.65 C
ATOM 7 C4' A A2997 62.251 49.674 17.415 1.00 54.87 C
ATOM 8 O4' A A2997 61.268 50.681 17.201 1.00 55.25 O
ATOM 9 C3' A A2997 63.154 49.724 16.195 1.00 55.26 C
ATOM 10 O3' A A2997 63.630 48.456 15.838 1.00 54.94 O
ATOM 11 C2' A A2997 62.290 50.351 15.113 1.00 55.75 C
ATOM 12 O2' A A2997 61.500 49.360 14.464 1.00 55.57 O
ATOM 13 C1' A A2997 61.370 51.226 15.914 1.00 55.80 C
ATOM 14 N9 A A2997 61.834 52.605 16.052 1.00 56.27 N
ATOM 15 C8 A A2997 62.463 53.134 17.145 1.00 56.18 C
ATOM 16 N7 A A2997 62.693 54.410 17.084 1.00 56.67 N
ATOM 17 C5 A A2997 62.111 54.730 15.869 1.00 57.11 C
ATOM 18 C6 A A2997 61.978 55.944 15.200 1.00 57.75 C
ATOM 19 N6 A A2997 62.456 57.064 15.704 1.00 58.05 N
ATOM 20 N1 A A2997 61.339 55.958 14.017 1.00 58.07 N
ATOM 21 C2 A A2997 60.858 54.816 13.521 1.00 57.78 C
ATOM 22 N3 A A2997 60.916 53.605 14.047 1.00 57.17 N
ATOM 23 C4 A A2997 61.554 53.637 15.233 1.00 56.86 C
ATOM 24 P G A2998 64.754 48.303 14.710 1.00 69.81 P
ATOM 25 OP1 G A2998 64.316 49.041 13.522 1.00 70.38 O
ATOM 26 OP2 G A2998 65.044 46.854 14.575 1.00 69.38 O
ATOM 27 O5' G A2998 65.978 49.046 15.358 1.00 69.93 O
TER
ATOM 1 O3' C B2992 60.736 56.402 6.121 1.00 72.58 O
ATOM 2 P G B2993 59.801 56.711 7.374 1.00 60.55 P
ATOM 3 OP1 G B2993 58.391 56.752 6.894 1.00 60.71 O
ATOM 4 OP2 G B2993 60.361 57.926 8.024 1.00 60.81 O
ATOM 5 O5' G B2993 60.042 55.428 8.322 1.00 59.75 O
ATOM 6 C5' G B2993 59.680 54.106 7.915 1.00 59.39 C
ATOM 7 C4' G B2993 60.385 53.041 8.746 1.00 58.74 C
ATOM 8 O4' G B2993 61.814 53.288 8.763 1.00 58.85 O
ATOM 9 C3' G B2993 60.038 52.977 10.231 1.00 58.23 C
ATOM 10 O3' G B2993 58.793 52.365 10.504 1.00 57.91 O
ATOM 11 C2' G B2993 61.212 52.206 10.779 1.00 57.81 C
ATOM 12 O2' G B2993 61.126 50.849 10.398 1.00 57.45 O
ATOM 13 C1' G B2993 62.355 52.840 9.995 1.00 58.31 C
ATOM 14 N9 G B2993 62.930 53.986 10.733 1.00 58.51 N
ATOM 15 C8 G B2993 62.757 55.330 10.528 1.00 59.07 C
ATOM 16 N7 G B2993 63.398 56.060 11.407 1.00 59.09 N
ATOM 17 C5 G B2993 64.005 55.154 12.259 1.00 58.52 C
ATOM 18 C6 G B2993 64.809 55.363 13.397 1.00 58.29 C
ATOM 19 O6 G B2993 65.197 56.394 13.925 1.00 58.54 O
ATOM 20 N1 G B2993 65.189 54.187 13.967 1.00 57.70 N
ATOM 21 C2 G B2993 64.864 52.955 13.490 1.00 57.38 C
ATOM 22 N2 G B2993 65.381 51.933 14.206 1.00 56.83 N
ATOM 23 N3 G B2993 64.117 52.740 12.420 1.00 57.58 N
ATOM 24 C4 G B2993 63.717 53.880 11.860 1.00 58.15 C
ATOM 25 P G B2994 57.506 53.268 10.814 1.00 63.48 P
ATOM 26 OP1 G B2994 56.376 52.690 10.059 1.00 63.50 O
ATOM 27 OP2 G B2994 57.892 54.672 10.564 1.00 64.08 O
ATOM 28 O5' G B2994 57.287 53.057 12.357 1.00 62.92 O
TER
Atoms:
OP1: (63.367,48.473,21.951)
OP2: (61.439,49.902,21.134)
C3': (63.154,49.724,16.195)
C1': (61.370,51.226,15.914)
C5': (62.908,49.958,18.714)
O4': (61.268,50.681,17.201)
C8: (62.463,53.134,17.145)
O2': (61.500,49.360,14.464)
C6: (61.978,55.944,15.200)
C5: (62.111,54.730,15.869)
C4: (61.554,53.637,15.233)
P: (62.328,48.747,20.943)
C4': (62.251,49.674,17.415)
C2': (62.290,50.351,15.113)
C2: (60.858,54.816,13.521)
N1: (61.339,55.958,14.017)
N3: (60.916,53.605,14.047)
N6: (62.456,57.064,15.704)
N7: (62.693,54.410,17.084)
N9: (61.834,52.605,16.052)
O5': (62.982,48.799,19.500)
O3': (63.630,48.456,15.838)
OP2: (61.439,49.902,21.134)
C3': (63.154,49.724,16.195)
C1': (61.370,51.226,15.914)
C5': (62.908,49.958,18.714)
O4': (61.268,50.681,17.201)
C8: (62.463,53.134,17.145)
O2': (61.500,49.360,14.464)
C6: (61.978,55.944,15.200)
C5: (62.111,54.730,15.869)
C4: (61.554,53.637,15.233)
P: (62.328,48.747,20.943)
C4': (62.251,49.674,17.415)
C2': (62.290,50.351,15.113)
C2: (60.858,54.816,13.521)
N1: (61.339,55.958,14.017)
N3: (60.916,53.605,14.047)
N6: (62.456,57.064,15.704)
N7: (62.693,54.410,17.084)
N9: (61.834,52.605,16.052)
O5': (62.982,48.799,19.500)
O3': (63.630,48.456,15.838)
OP1: (58.391,56.752,6.894)
OP2: (60.361,57.926,8.024)
C3': (60.038,52.977,10.231)
C1': (62.355,52.840,9.995)
C5': (59.680,54.106,7.915)
O6: (65.197,56.394,13.925)
O4': (61.814,53.288,8.763)
C8: (62.757,55.330,10.528)
C2: (64.864,52.955,13.490)
C6: (64.809,55.363,13.397)
C5: (64.005,55.154,12.259)
C4: (63.717,53.880,11.860)
P: (59.801,56.711,7.374)
C4': (60.385,53.041,8.746)
C2': (61.212,52.206,10.779)
O2': (61.126,50.849,10.398)
N1: (65.189,54.187,13.967)
N2: (65.381,51.933,14.206)
N3: (64.117,52.740,12.420)
N7: (63.398,56.060,11.407)
N9: (62.930,53.986,10.733)
O5': (60.042,55.428,8.322)
O3': (58.793,52.365,10.504)
OP2: (60.361,57.926,8.024)
C3': (60.038,52.977,10.231)
C1': (62.355,52.840,9.995)
C5': (59.680,54.106,7.915)
O6: (65.197,56.394,13.925)
O4': (61.814,53.288,8.763)
C8: (62.757,55.330,10.528)
C2: (64.864,52.955,13.490)
C6: (64.809,55.363,13.397)
C5: (64.005,55.154,12.259)
C4: (63.717,53.880,11.860)
P: (59.801,56.711,7.374)
C4': (60.385,53.041,8.746)
C2': (61.212,52.206,10.779)
O2': (61.126,50.849,10.398)
N1: (65.189,54.187,13.967)
N2: (65.381,51.933,14.206)
N3: (64.117,52.740,12.420)
N7: (63.398,56.060,11.407)
N9: (62.930,53.986,10.733)
O5': (60.042,55.428,8.322)
O3': (58.793,52.365,10.504)
Image (generated by PyMOL):