ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3G4M:A9:A57

Extra

PDB:
ATOM 1 O3' A A 8 82.457 5.660 4.403 1.00 35.83 O
ATOM 2 P A A 9 82.050 5.776 5.951 1.00 37.73 P
ATOM 3 OP1 A A 9 82.795 4.746 6.723 1.00 35.57 O
ATOM 4 OP2 A A 9 80.565 5.809 6.008 1.00 37.98 O
ATOM 5 O5' A A 9 82.570 7.218 6.378 1.00 36.67 O
ATOM 6 C5' A A 9 81.793 8.378 6.111 1.00 34.50 C
ATOM 7 C4' A A 9 81.656 9.207 7.361 1.00 34.46 C
ATOM 8 O4' A A 9 80.707 8.572 8.254 1.00 33.91 O
ATOM 9 C3' A A 9 82.917 9.323 8.199 1.00 33.91 C
ATOM 10 O3' A A 9 83.745 10.365 7.692 1.00 37.12 O
ATOM 11 C2' A A 9 82.353 9.669 9.577 1.00 33.33 C
ATOM 12 O2' A A 9 82.055 11.041 9.724 1.00 33.74 O
ATOM 13 C1' A A 9 81.048 8.870 9.596 1.00 31.29 C
ATOM 14 N9 A A 9 81.118 7.615 10.342 1.00 29.34 N
ATOM 15 C8 A A 9 81.133 6.339 9.837 1.00 29.84 C
ATOM 16 N7 A A 9 81.175 5.406 10.756 1.00 28.91 N
ATOM 17 C5 A A 9 81.195 6.113 11.948 1.00 29.24 C
ATOM 18 C6 A A 9 81.232 5.700 13.293 1.00 30.14 C
ATOM 19 N6 A A 9 81.244 4.421 13.674 1.00 28.12 N
ATOM 20 N1 A A 9 81.250 6.660 14.245 1.00 31.06 N
ATOM 21 C2 A A 9 81.226 7.944 13.860 1.00 31.10 C
ATOM 22 N3 A A 9 81.182 8.455 12.630 1.00 31.37 N
ATOM 23 C4 A A 9 81.169 7.476 11.709 1.00 29.54 C
ATOM 24 P U A 10 85.287 10.063 7.339 1.00 39.56 P
ATOM 25 OP1 U A 10 85.584 8.659 7.725 1.00 40.10 O
ATOM 26 OP2 U A 10 86.106 11.164 7.905 1.00 37.71 O
ATOM 27 O5' U A 10 85.352 10.178 5.749 1.00 39.53 O
TER

ATOM 1 O3' C B 56 84.558 -2.951 12.652 1.00 25.01 O
ATOM 2 P G B 57 83.055 -2.388 12.593 1.00 24.50 P
ATOM 3 OP1 G B 57 82.145 -3.468 13.047 1.00 25.48 O
ATOM 4 OP2 G B 57 82.867 -1.783 11.254 1.00 25.32 O
ATOM 5 O5' G B 57 83.038 -1.223 13.677 1.00 23.94 O
ATOM 6 C5' G B 57 83.253 -1.516 15.057 1.00 28.64 C
ATOM 7 C4' G B 57 83.026 -0.281 15.895 1.00 28.94 C
ATOM 8 O4' G B 57 84.126 0.646 15.695 1.00 28.53 O
ATOM 9 C3' G B 57 81.789 0.519 15.526 1.00 30.40 C
ATOM 10 O3' G B 57 80.639 -0.011 16.173 1.00 31.81 O
ATOM 11 C2' G B 57 82.140 1.907 16.045 1.00 29.52 C
ATOM 12 O2' G B 57 81.907 2.039 17.431 1.00 30.66 O
ATOM 13 C1' G B 57 83.638 1.979 15.735 1.00 28.52 C
ATOM 14 N9 G B 57 83.918 2.606 14.447 1.00 26.77 N
ATOM 15 C8 G B 57 83.978 1.990 13.220 1.00 26.44 C
ATOM 16 N7 G B 57 84.229 2.819 12.243 1.00 26.34 N
ATOM 17 C5 G B 57 84.350 4.055 12.864 1.00 26.04 C
ATOM 18 C6 G B 57 84.625 5.337 12.318 1.00 26.57 C
ATOM 19 O6 G B 57 84.832 5.647 11.136 1.00 25.64 O
ATOM 20 N1 G B 57 84.650 6.316 13.307 1.00 26.65 N
ATOM 21 C2 G B 57 84.437 6.093 14.645 1.00 25.14 C
ATOM 22 N2 G B 57 84.483 7.167 15.442 1.00 24.58 N
ATOM 23 N3 G B 57 84.191 4.905 15.164 1.00 26.35 N
ATOM 24 C4 G B 57 84.161 3.939 14.224 1.00 26.16 C
ATOM 25 P A B 58 79.180 0.310 15.583 1.00 33.38 P
ATOM 26 OP1 A B 58 78.165 -0.332 16.460 1.00 34.41 O
ATOM 27 OP2 A B 58 79.204 -0.008 14.132 1.00 31.58 O
ATOM 28 O5' A B 58 79.052 1.889 15.739 1.00 34.63 O
TER

Atoms:
OP1: (82.795,4.746,6.723)
OP2: (80.565,5.809,6.008)
C3': (82.917,9.323,8.199)
C1': (81.048,8.870,9.596)
C5': (81.793,8.378,6.111)
O4': (80.707,8.572,8.254)
C8: (81.133,6.339,9.837)
O2': (82.055,11.041,9.724)
C6: (81.232,5.700,13.293)
C5: (81.195,6.113,11.948)
C4: (81.169,7.476,11.709)
P: (82.050,5.776,5.951)
C4': (81.656,9.207,7.361)
C2': (82.353,9.669,9.577)
C2: (81.226,7.944,13.860)
N1: (81.250,6.660,14.245)
N3: (81.182,8.455,12.630)
N6: (81.244,4.421,13.674)
N7: (81.175,5.406,10.756)
N9: (81.118,7.615,10.342)
O5': (82.570,7.218,6.378)
O3': (83.745,10.365,7.692)
OP1: (82.145,-3.468,13.047)
OP2: (82.867,-1.783,11.254)
C3': (81.789,0.519,15.526)
C1': (83.638,1.979,15.735)
C5': (83.253,-1.516,15.057)
O6: (84.832,5.647,11.136)
O4': (84.126,0.646,15.695)
C8: (83.978,1.990,13.220)
C2: (84.437,6.093,14.645)
C6: (84.625,5.337,12.318)
C5: (84.350,4.055,12.864)
C4: (84.161,3.939,14.224)
P: (83.055,-2.388,12.593)
C4': (83.026,-0.281,15.895)
C2': (82.140,1.907,16.045)
O2': (81.907,2.039,17.431)
N1: (84.650,6.316,13.307)
N2: (84.483,7.167,15.442)
N3: (84.191,4.905,15.164)
N7: (84.229,2.819,12.243)
N9: (83.918,2.606,14.447)
O5': (83.038,-1.223,13.677)
O3': (80.639,-0.011,16.173)
Image (generated by PyMOL):
PyMOL image
show in jmol