Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3DS7:A9:A57
Extra
PDB:
ATOM 1 O3' A A 8 -5.300 3.997 -21.534 1.00 29.40 O
ATOM 2 P A A 9 -5.481 5.561 -21.312 1.00 26.79 P
ATOM 3 OP1 A A 9 -4.530 6.300 -22.223 1.00 28.01 O
ATOM 4 OP2 A A 9 -5.549 5.891 -19.890 1.00 27.20 O
ATOM 5 O5' A A 9 -6.942 5.767 -21.962 1.00 28.03 O
ATOM 6 C5' A A 9 -8.080 5.419 -21.244 1.00 27.22 C
ATOM 7 C4' A A 9 -8.970 6.624 -21.067 1.00 26.93 C
ATOM 8 O4' A A 9 -8.485 7.473 -19.993 1.00 26.18 O
ATOM 9 C3' A A 9 -9.110 7.549 -22.277 1.00 25.72 C
ATOM 10 O3' A A 9 -10.179 7.087 -23.081 1.00 28.57 O
ATOM 11 C2' A A 9 -9.595 8.835 -21.620 1.00 25.55 C
ATOM 12 O2' A A 9 -10.922 8.714 -21.286 1.00 25.53 O
ATOM 13 C1' A A 9 -8.839 8.833 -20.286 1.00 26.72 C
ATOM 14 N9 A A 9 -7.611 9.642 -20.382 1.00 25.06 N
ATOM 15 C8 A A 9 -6.278 9.230 -20.388 1.00 25.74 C
ATOM 16 N7 A A 9 -5.421 10.230 -20.420 1.00 22.57 N
ATOM 17 C5 A A 9 -6.231 11.373 -20.447 1.00 23.34 C
ATOM 18 C6 A A 9 -5.931 12.777 -20.474 1.00 23.74 C
ATOM 19 N6 A A 9 -4.689 13.290 -20.388 1.00 24.51 N
ATOM 20 N1 A A 9 -6.967 13.637 -20.548 1.00 23.26 N
ATOM 21 C2 A A 9 -8.261 13.125 -20.550 1.00 23.62 C
ATOM 22 N3 A A 9 -8.664 11.837 -20.496 1.00 23.07 N
ATOM 23 C4 A A 9 -7.586 11.014 -20.445 1.00 24.27 C
ATOM 24 P U A 10 -9.931 6.629 -24.573 1.00 26.97 P
ATOM 25 OP1 U A 10 -8.599 7.147 -24.939 1.00 29.45 O
ATOM 26 OP2 U A 10 -11.084 7.048 -25.381 1.00 29.34 O
ATOM 27 O5' U A 10 -10.064 5.033 -24.531 1.00 29.94 O
TER
ATOM 1 O3' C B 56 3.203 12.396 -23.458 1.00 14.63 O
ATOM 2 P G B 57 2.635 12.245 -21.984 1.00 16.49 P
ATOM 3 OP1 G B 57 3.762 12.715 -21.142 1.00 15.01 O
ATOM 4 OP2 G B 57 1.995 10.931 -21.676 1.00 15.15 O
ATOM 5 O5' G B 57 1.455 13.330 -21.939 1.00 16.21 O
ATOM 6 C5' G B 57 1.772 14.728 -21.829 1.00 19.35 C
ATOM 7 C4' G B 57 0.513 15.590 -21.931 1.00 19.78 C
ATOM 8 O4' G B 57 -0.192 15.255 -23.179 1.00 21.00 O
ATOM 9 C3' G B 57 -0.515 15.254 -20.871 1.00 23.05 C
ATOM 10 O3' G B 57 -0.111 15.907 -19.657 1.00 24.75 O
ATOM 11 C2' G B 57 -1.791 15.803 -21.500 1.00 22.90 C
ATOM 12 O2' G B 57 -1.816 17.236 -21.573 1.00 24.03 O
ATOM 13 C1' G B 57 -1.606 15.369 -22.946 1.00 21.45 C
ATOM 14 N9 G B 57 -2.230 14.095 -23.158 1.00 18.86 N
ATOM 15 C8 G B 57 -1.597 12.854 -23.191 1.00 17.91 C
ATOM 16 N7 G B 57 -2.438 11.872 -23.424 1.00 16.60 N
ATOM 17 C5 G B 57 -3.687 12.497 -23.543 1.00 17.82 C
ATOM 18 C6 G B 57 -4.983 11.933 -23.699 1.00 19.52 C
ATOM 19 O6 G B 57 -5.280 10.741 -23.788 1.00 15.67 O
ATOM 20 N1 G B 57 -5.992 12.917 -23.720 1.00 16.63 N
ATOM 21 C2 G B 57 -5.733 14.279 -23.575 1.00 19.07 C
ATOM 22 N2 G B 57 -6.784 15.136 -23.641 1.00 15.78 N
ATOM 23 N3 G B 57 -4.544 14.778 -23.390 1.00 18.60 N
ATOM 24 C4 G B 57 -3.576 13.853 -23.384 1.00 18.80 C
ATOM 25 P A B 58 -0.529 15.303 -18.236 1.00 27.82 P
ATOM 26 OP1 A B 58 0.327 16.134 -17.285 1.00 28.88 O
ATOM 27 OP2 A B 58 -0.515 13.843 -18.089 1.00 27.21 O
ATOM 28 O5' A B 58 -2.009 15.860 -18.081 1.00 29.11 O
TER
ATOM 2 P A A 9 -5.481 5.561 -21.312 1.00 26.79 P
ATOM 3 OP1 A A 9 -4.530 6.300 -22.223 1.00 28.01 O
ATOM 4 OP2 A A 9 -5.549 5.891 -19.890 1.00 27.20 O
ATOM 5 O5' A A 9 -6.942 5.767 -21.962 1.00 28.03 O
ATOM 6 C5' A A 9 -8.080 5.419 -21.244 1.00 27.22 C
ATOM 7 C4' A A 9 -8.970 6.624 -21.067 1.00 26.93 C
ATOM 8 O4' A A 9 -8.485 7.473 -19.993 1.00 26.18 O
ATOM 9 C3' A A 9 -9.110 7.549 -22.277 1.00 25.72 C
ATOM 10 O3' A A 9 -10.179 7.087 -23.081 1.00 28.57 O
ATOM 11 C2' A A 9 -9.595 8.835 -21.620 1.00 25.55 C
ATOM 12 O2' A A 9 -10.922 8.714 -21.286 1.00 25.53 O
ATOM 13 C1' A A 9 -8.839 8.833 -20.286 1.00 26.72 C
ATOM 14 N9 A A 9 -7.611 9.642 -20.382 1.00 25.06 N
ATOM 15 C8 A A 9 -6.278 9.230 -20.388 1.00 25.74 C
ATOM 16 N7 A A 9 -5.421 10.230 -20.420 1.00 22.57 N
ATOM 17 C5 A A 9 -6.231 11.373 -20.447 1.00 23.34 C
ATOM 18 C6 A A 9 -5.931 12.777 -20.474 1.00 23.74 C
ATOM 19 N6 A A 9 -4.689 13.290 -20.388 1.00 24.51 N
ATOM 20 N1 A A 9 -6.967 13.637 -20.548 1.00 23.26 N
ATOM 21 C2 A A 9 -8.261 13.125 -20.550 1.00 23.62 C
ATOM 22 N3 A A 9 -8.664 11.837 -20.496 1.00 23.07 N
ATOM 23 C4 A A 9 -7.586 11.014 -20.445 1.00 24.27 C
ATOM 24 P U A 10 -9.931 6.629 -24.573 1.00 26.97 P
ATOM 25 OP1 U A 10 -8.599 7.147 -24.939 1.00 29.45 O
ATOM 26 OP2 U A 10 -11.084 7.048 -25.381 1.00 29.34 O
ATOM 27 O5' U A 10 -10.064 5.033 -24.531 1.00 29.94 O
TER
ATOM 1 O3' C B 56 3.203 12.396 -23.458 1.00 14.63 O
ATOM 2 P G B 57 2.635 12.245 -21.984 1.00 16.49 P
ATOM 3 OP1 G B 57 3.762 12.715 -21.142 1.00 15.01 O
ATOM 4 OP2 G B 57 1.995 10.931 -21.676 1.00 15.15 O
ATOM 5 O5' G B 57 1.455 13.330 -21.939 1.00 16.21 O
ATOM 6 C5' G B 57 1.772 14.728 -21.829 1.00 19.35 C
ATOM 7 C4' G B 57 0.513 15.590 -21.931 1.00 19.78 C
ATOM 8 O4' G B 57 -0.192 15.255 -23.179 1.00 21.00 O
ATOM 9 C3' G B 57 -0.515 15.254 -20.871 1.00 23.05 C
ATOM 10 O3' G B 57 -0.111 15.907 -19.657 1.00 24.75 O
ATOM 11 C2' G B 57 -1.791 15.803 -21.500 1.00 22.90 C
ATOM 12 O2' G B 57 -1.816 17.236 -21.573 1.00 24.03 O
ATOM 13 C1' G B 57 -1.606 15.369 -22.946 1.00 21.45 C
ATOM 14 N9 G B 57 -2.230 14.095 -23.158 1.00 18.86 N
ATOM 15 C8 G B 57 -1.597 12.854 -23.191 1.00 17.91 C
ATOM 16 N7 G B 57 -2.438 11.872 -23.424 1.00 16.60 N
ATOM 17 C5 G B 57 -3.687 12.497 -23.543 1.00 17.82 C
ATOM 18 C6 G B 57 -4.983 11.933 -23.699 1.00 19.52 C
ATOM 19 O6 G B 57 -5.280 10.741 -23.788 1.00 15.67 O
ATOM 20 N1 G B 57 -5.992 12.917 -23.720 1.00 16.63 N
ATOM 21 C2 G B 57 -5.733 14.279 -23.575 1.00 19.07 C
ATOM 22 N2 G B 57 -6.784 15.136 -23.641 1.00 15.78 N
ATOM 23 N3 G B 57 -4.544 14.778 -23.390 1.00 18.60 N
ATOM 24 C4 G B 57 -3.576 13.853 -23.384 1.00 18.80 C
ATOM 25 P A B 58 -0.529 15.303 -18.236 1.00 27.82 P
ATOM 26 OP1 A B 58 0.327 16.134 -17.285 1.00 28.88 O
ATOM 27 OP2 A B 58 -0.515 13.843 -18.089 1.00 27.21 O
ATOM 28 O5' A B 58 -2.009 15.860 -18.081 1.00 29.11 O
TER
Atoms:
OP1: (-4.530,6.300,-22.223)
OP2: (-5.549,5.891,-19.890)
C3': (-9.110,7.549,-22.277)
C1': (-8.839,8.833,-20.286)
C5': (-8.080,5.419,-21.244)
O4': (-8.485,7.473,-19.993)
C8: (-6.278,9.230,-20.388)
O2': (-10.922,8.714,-21.286)
C6: (-5.931,12.777,-20.474)
C5: (-6.231,11.373,-20.447)
C4: (-7.586,11.014,-20.445)
P: (-5.481,5.561,-21.312)
C4': (-8.970,6.624,-21.067)
C2': (-9.595,8.835,-21.620)
C2: (-8.261,13.125,-20.550)
N1: (-6.967,13.637,-20.548)
N3: (-8.664,11.837,-20.496)
N6: (-4.689,13.290,-20.388)
N7: (-5.421,10.230,-20.420)
N9: (-7.611,9.642,-20.382)
O5': (-6.942,5.767,-21.962)
O3': (-10.179,7.087,-23.081)
OP2: (-5.549,5.891,-19.890)
C3': (-9.110,7.549,-22.277)
C1': (-8.839,8.833,-20.286)
C5': (-8.080,5.419,-21.244)
O4': (-8.485,7.473,-19.993)
C8: (-6.278,9.230,-20.388)
O2': (-10.922,8.714,-21.286)
C6: (-5.931,12.777,-20.474)
C5: (-6.231,11.373,-20.447)
C4: (-7.586,11.014,-20.445)
P: (-5.481,5.561,-21.312)
C4': (-8.970,6.624,-21.067)
C2': (-9.595,8.835,-21.620)
C2: (-8.261,13.125,-20.550)
N1: (-6.967,13.637,-20.548)
N3: (-8.664,11.837,-20.496)
N6: (-4.689,13.290,-20.388)
N7: (-5.421,10.230,-20.420)
N9: (-7.611,9.642,-20.382)
O5': (-6.942,5.767,-21.962)
O3': (-10.179,7.087,-23.081)
OP1: (3.762,12.715,-21.142)
OP2: (1.995,10.931,-21.676)
C3': (-0.515,15.254,-20.871)
C1': (-1.606,15.369,-22.946)
C5': (1.772,14.728,-21.829)
O6: (-5.280,10.741,-23.788)
O4': (-0.192,15.255,-23.179)
C8: (-1.597,12.854,-23.191)
C2: (-5.733,14.279,-23.575)
C6: (-4.983,11.933,-23.699)
C5: (-3.687,12.497,-23.543)
C4: (-3.576,13.853,-23.384)
P: (2.635,12.245,-21.984)
C4': (0.513,15.590,-21.931)
C2': (-1.791,15.803,-21.500)
O2': (-1.816,17.236,-21.573)
N1: (-5.992,12.917,-23.720)
N2: (-6.784,15.136,-23.641)
N3: (-4.544,14.778,-23.390)
N7: (-2.438,11.872,-23.424)
N9: (-2.230,14.095,-23.158)
O5': (1.455,13.330,-21.939)
O3': (-0.111,15.907,-19.657)
OP2: (1.995,10.931,-21.676)
C3': (-0.515,15.254,-20.871)
C1': (-1.606,15.369,-22.946)
C5': (1.772,14.728,-21.829)
O6: (-5.280,10.741,-23.788)
O4': (-0.192,15.255,-23.179)
C8: (-1.597,12.854,-23.191)
C2: (-5.733,14.279,-23.575)
C6: (-4.983,11.933,-23.699)
C5: (-3.687,12.497,-23.543)
C4: (-3.576,13.853,-23.384)
P: (2.635,12.245,-21.984)
C4': (0.513,15.590,-21.931)
C2': (-1.791,15.803,-21.500)
O2': (-1.816,17.236,-21.573)
N1: (-5.992,12.917,-23.720)
N2: (-6.784,15.136,-23.641)
N3: (-4.544,14.778,-23.390)
N7: (-2.438,11.872,-23.424)
N9: (-2.230,14.095,-23.158)
O5': (1.455,13.330,-21.939)
O3': (-0.111,15.907,-19.657)
Image (generated by PyMOL):