Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5B:21497:21470
Extra
PDB:
ATOM 1 O3' U A1496 -97.559 -63.287 37.418 1.00 97.36 O
ATOM 2 P A A1497 -98.614 -63.371 38.646 1.00 91.56 P
ATOM 3 OP1 A A1497 -99.985 -63.444 38.069 1.00 92.39 O
ATOM 4 OP2 A A1497 -98.288 -62.237 39.561 1.00 91.11 O
ATOM 5 O5' A A1497 -98.248 -64.761 39.349 1.00 91.58 O
ATOM 6 C5' A A1497 -99.176 -65.830 39.405 1.00 92.32 C
ATOM 7 C4' A A1497 -98.793 -66.825 40.467 1.00 92.28 C
ATOM 8 O4' A A1497 -97.511 -67.432 40.138 1.00 91.70 O
ATOM 9 C3' A A1497 -98.616 -66.241 41.855 1.00 92.03 C
ATOM 10 O3' A A1497 -99.833 -66.201 42.581 1.00 92.70 O
ATOM 11 C2' A A1497 -97.540 -67.128 42.482 1.00 91.62 C
ATOM 12 O2' A A1497 -98.104 -68.337 42.971 1.00 92.21 O
ATOM 13 C1' A A1497 -96.667 -67.455 41.267 1.00 91.22 C
ATOM 14 N9 A A1497 -95.590 -66.451 41.040 1.00 90.42 N
ATOM 15 C8 A A1497 -95.531 -65.154 41.475 1.00 90.10 C
ATOM 16 N7 A A1497 -94.488 -64.476 41.064 1.00 89.42 N
ATOM 17 C5 A A1497 -93.783 -65.366 40.285 1.00 89.26 C
ATOM 18 C6 A A1497 -92.586 -65.241 39.564 1.00 88.65 C
ATOM 19 N6 A A1497 -91.840 -64.127 39.521 1.00 88.04 N
ATOM 20 N1 A A1497 -92.154 -66.317 38.887 1.00 88.69 N
ATOM 21 C2 A A1497 -92.869 -67.426 38.934 1.00 89.29 C
ATOM 22 N3 A A1497 -94.018 -67.652 39.566 1.00 89.90 N
ATOM 23 C4 A A1497 -94.447 -66.576 40.247 1.00 89.87 C
ATOM 24 P A A1498 -100.092 -65.060 43.675 1.00 82.75 P
ATOM 25 OP1 A A1498 -101.548 -64.883 43.807 1.00 83.57 O
ATOM 26 OP2 A A1498 -99.283 -63.891 43.268 1.00 82.04 O
ATOM 27 O5' A A1498 -99.500 -65.733 45.003 1.00 82.56 O
TER
ATOM 1 O3' A B1469 -88.145 -60.920 43.218 1.00 81.19 O
ATOM 2 P G B1470 -88.919 -61.038 41.815 1.00 78.91 P
ATOM 3 OP1 G B1470 -88.918 -59.694 41.173 1.00 78.67 O
ATOM 4 OP2 G B1470 -90.221 -61.709 42.068 1.00 79.66 O
ATOM 5 O5' G B1470 -87.958 -61.994 41.037 1.00 78.68 O
ATOM 6 C5' G B1470 -88.057 -62.138 39.665 1.00 78.82 C
ATOM 7 C4' G B1470 -87.657 -63.510 39.253 1.00 78.93 C
ATOM 8 O4' G B1470 -87.601 -64.378 40.413 1.00 79.05 O
ATOM 9 C3' G B1470 -88.614 -64.187 38.320 1.00 79.56 C
ATOM 10 O3' G B1470 -88.395 -63.789 36.986 1.00 79.46 O
ATOM 11 C2' G B1470 -88.338 -65.663 38.577 1.00 79.74 C
ATOM 12 O2' G B1470 -87.152 -66.060 37.918 1.00 79.32 O
ATOM 13 C1' G B1470 -88.060 -65.665 40.074 1.00 79.55 C
ATOM 14 N9 G B1470 -89.260 -65.943 40.868 1.00 80.15 N
ATOM 15 C8 G B1470 -89.854 -65.031 41.690 1.00 80.21 C
ATOM 16 N7 G B1470 -90.897 -65.485 42.315 1.00 80.81 N
ATOM 17 C5 G B1470 -91.008 -66.798 41.869 1.00 81.17 C
ATOM 18 C6 G B1470 -91.973 -67.801 42.183 1.00 81.88 C
ATOM 19 O6 G B1470 -92.937 -67.704 42.952 1.00 82.34 O
ATOM 20 N1 G B1470 -91.731 -69.001 41.524 1.00 82.05 N
ATOM 21 C2 G B1470 -90.699 -69.210 40.656 1.00 81.61 C
ATOM 22 N2 G B1470 -90.616 -70.429 40.121 1.00 81.88 N
ATOM 23 N3 G B1470 -89.790 -68.287 40.343 1.00 80.96 N
ATOM 24 C4 G B1470 -89.991 -67.103 40.982 1.00 80.76 C
ATOM 25 P U B1471 -88.865 -62.339 36.469 1.00 88.80 P
ATOM 26 OP1 U B1471 -87.970 -61.332 37.058 1.00 88.14 O
ATOM 27 OP2 U B1471 -90.325 -62.244 36.728 1.00 89.46 O
ATOM 28 O5' U B1471 -88.580 -62.438 34.915 1.00 88.81 O
TER
ATOM 2 P A A1497 -98.614 -63.371 38.646 1.00 91.56 P
ATOM 3 OP1 A A1497 -99.985 -63.444 38.069 1.00 92.39 O
ATOM 4 OP2 A A1497 -98.288 -62.237 39.561 1.00 91.11 O
ATOM 5 O5' A A1497 -98.248 -64.761 39.349 1.00 91.58 O
ATOM 6 C5' A A1497 -99.176 -65.830 39.405 1.00 92.32 C
ATOM 7 C4' A A1497 -98.793 -66.825 40.467 1.00 92.28 C
ATOM 8 O4' A A1497 -97.511 -67.432 40.138 1.00 91.70 O
ATOM 9 C3' A A1497 -98.616 -66.241 41.855 1.00 92.03 C
ATOM 10 O3' A A1497 -99.833 -66.201 42.581 1.00 92.70 O
ATOM 11 C2' A A1497 -97.540 -67.128 42.482 1.00 91.62 C
ATOM 12 O2' A A1497 -98.104 -68.337 42.971 1.00 92.21 O
ATOM 13 C1' A A1497 -96.667 -67.455 41.267 1.00 91.22 C
ATOM 14 N9 A A1497 -95.590 -66.451 41.040 1.00 90.42 N
ATOM 15 C8 A A1497 -95.531 -65.154 41.475 1.00 90.10 C
ATOM 16 N7 A A1497 -94.488 -64.476 41.064 1.00 89.42 N
ATOM 17 C5 A A1497 -93.783 -65.366 40.285 1.00 89.26 C
ATOM 18 C6 A A1497 -92.586 -65.241 39.564 1.00 88.65 C
ATOM 19 N6 A A1497 -91.840 -64.127 39.521 1.00 88.04 N
ATOM 20 N1 A A1497 -92.154 -66.317 38.887 1.00 88.69 N
ATOM 21 C2 A A1497 -92.869 -67.426 38.934 1.00 89.29 C
ATOM 22 N3 A A1497 -94.018 -67.652 39.566 1.00 89.90 N
ATOM 23 C4 A A1497 -94.447 -66.576 40.247 1.00 89.87 C
ATOM 24 P A A1498 -100.092 -65.060 43.675 1.00 82.75 P
ATOM 25 OP1 A A1498 -101.548 -64.883 43.807 1.00 83.57 O
ATOM 26 OP2 A A1498 -99.283 -63.891 43.268 1.00 82.04 O
ATOM 27 O5' A A1498 -99.500 -65.733 45.003 1.00 82.56 O
TER
ATOM 1 O3' A B1469 -88.145 -60.920 43.218 1.00 81.19 O
ATOM 2 P G B1470 -88.919 -61.038 41.815 1.00 78.91 P
ATOM 3 OP1 G B1470 -88.918 -59.694 41.173 1.00 78.67 O
ATOM 4 OP2 G B1470 -90.221 -61.709 42.068 1.00 79.66 O
ATOM 5 O5' G B1470 -87.958 -61.994 41.037 1.00 78.68 O
ATOM 6 C5' G B1470 -88.057 -62.138 39.665 1.00 78.82 C
ATOM 7 C4' G B1470 -87.657 -63.510 39.253 1.00 78.93 C
ATOM 8 O4' G B1470 -87.601 -64.378 40.413 1.00 79.05 O
ATOM 9 C3' G B1470 -88.614 -64.187 38.320 1.00 79.56 C
ATOM 10 O3' G B1470 -88.395 -63.789 36.986 1.00 79.46 O
ATOM 11 C2' G B1470 -88.338 -65.663 38.577 1.00 79.74 C
ATOM 12 O2' G B1470 -87.152 -66.060 37.918 1.00 79.32 O
ATOM 13 C1' G B1470 -88.060 -65.665 40.074 1.00 79.55 C
ATOM 14 N9 G B1470 -89.260 -65.943 40.868 1.00 80.15 N
ATOM 15 C8 G B1470 -89.854 -65.031 41.690 1.00 80.21 C
ATOM 16 N7 G B1470 -90.897 -65.485 42.315 1.00 80.81 N
ATOM 17 C5 G B1470 -91.008 -66.798 41.869 1.00 81.17 C
ATOM 18 C6 G B1470 -91.973 -67.801 42.183 1.00 81.88 C
ATOM 19 O6 G B1470 -92.937 -67.704 42.952 1.00 82.34 O
ATOM 20 N1 G B1470 -91.731 -69.001 41.524 1.00 82.05 N
ATOM 21 C2 G B1470 -90.699 -69.210 40.656 1.00 81.61 C
ATOM 22 N2 G B1470 -90.616 -70.429 40.121 1.00 81.88 N
ATOM 23 N3 G B1470 -89.790 -68.287 40.343 1.00 80.96 N
ATOM 24 C4 G B1470 -89.991 -67.103 40.982 1.00 80.76 C
ATOM 25 P U B1471 -88.865 -62.339 36.469 1.00 88.80 P
ATOM 26 OP1 U B1471 -87.970 -61.332 37.058 1.00 88.14 O
ATOM 27 OP2 U B1471 -90.325 -62.244 36.728 1.00 89.46 O
ATOM 28 O5' U B1471 -88.580 -62.438 34.915 1.00 88.81 O
TER
Atoms:
OP1: (-99.985,-63.444,38.069)
OP2: (-98.288,-62.237,39.561)
C3': (-98.616,-66.241,41.855)
C1': (-96.667,-67.455,41.267)
C5': (-99.176,-65.830,39.405)
O4': (-97.511,-67.432,40.138)
C8: (-95.531,-65.154,41.475)
O2': (-98.104,-68.337,42.971)
C6: (-92.586,-65.241,39.564)
C5: (-93.783,-65.366,40.285)
C4: (-94.447,-66.576,40.247)
P: (-98.614,-63.371,38.646)
C4': (-98.793,-66.825,40.467)
C2': (-97.540,-67.128,42.482)
C2: (-92.869,-67.426,38.934)
N1: (-92.154,-66.317,38.887)
N3: (-94.018,-67.652,39.566)
N6: (-91.840,-64.127,39.521)
N7: (-94.488,-64.476,41.064)
N9: (-95.590,-66.451,41.040)
O5': (-98.248,-64.761,39.349)
O3': (-99.833,-66.201,42.581)
OP2: (-98.288,-62.237,39.561)
C3': (-98.616,-66.241,41.855)
C1': (-96.667,-67.455,41.267)
C5': (-99.176,-65.830,39.405)
O4': (-97.511,-67.432,40.138)
C8: (-95.531,-65.154,41.475)
O2': (-98.104,-68.337,42.971)
C6: (-92.586,-65.241,39.564)
C5: (-93.783,-65.366,40.285)
C4: (-94.447,-66.576,40.247)
P: (-98.614,-63.371,38.646)
C4': (-98.793,-66.825,40.467)
C2': (-97.540,-67.128,42.482)
C2: (-92.869,-67.426,38.934)
N1: (-92.154,-66.317,38.887)
N3: (-94.018,-67.652,39.566)
N6: (-91.840,-64.127,39.521)
N7: (-94.488,-64.476,41.064)
N9: (-95.590,-66.451,41.040)
O5': (-98.248,-64.761,39.349)
O3': (-99.833,-66.201,42.581)
OP1: (-88.918,-59.694,41.173)
OP2: (-90.221,-61.709,42.068)
C3': (-88.614,-64.187,38.320)
C1': (-88.060,-65.665,40.074)
C5': (-88.057,-62.138,39.665)
O6: (-92.937,-67.704,42.952)
O4': (-87.601,-64.378,40.413)
C8: (-89.854,-65.031,41.690)
C2: (-90.699,-69.210,40.656)
C6: (-91.973,-67.801,42.183)
C5: (-91.008,-66.798,41.869)
C4: (-89.991,-67.103,40.982)
P: (-88.919,-61.038,41.815)
C4': (-87.657,-63.510,39.253)
C2': (-88.338,-65.663,38.577)
O2': (-87.152,-66.060,37.918)
N1: (-91.731,-69.001,41.524)
N2: (-90.616,-70.429,40.121)
N3: (-89.790,-68.287,40.343)
N7: (-90.897,-65.485,42.315)
N9: (-89.260,-65.943,40.868)
O5': (-87.958,-61.994,41.037)
O3': (-88.395,-63.789,36.986)
OP2: (-90.221,-61.709,42.068)
C3': (-88.614,-64.187,38.320)
C1': (-88.060,-65.665,40.074)
C5': (-88.057,-62.138,39.665)
O6: (-92.937,-67.704,42.952)
O4': (-87.601,-64.378,40.413)
C8: (-89.854,-65.031,41.690)
C2: (-90.699,-69.210,40.656)
C6: (-91.973,-67.801,42.183)
C5: (-91.008,-66.798,41.869)
C4: (-89.991,-67.103,40.982)
P: (-88.919,-61.038,41.815)
C4': (-87.657,-63.510,39.253)
C2': (-88.338,-65.663,38.577)
O2': (-87.152,-66.060,37.918)
N1: (-91.731,-69.001,41.524)
N2: (-90.616,-70.429,40.121)
N3: (-89.790,-68.287,40.343)
N7: (-90.897,-65.485,42.315)
N9: (-89.260,-65.943,40.868)
O5': (-87.958,-61.994,41.037)
O3': (-88.395,-63.789,36.986)
Image (generated by PyMOL):