Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2H1M:A4:A5
Extra
PDB:
ATOM 1 P A A 4 -20.391 37.598 -5.919 1.00 29.74 P
ATOM 2 OP1 A A 4 -20.607 38.683 -4.937 1.00 30.03 O
ATOM 3 OP2 A A 4 -19.178 36.758 -5.807 1.00 29.78 O
ATOM 4 O5' A A 4 -21.652 36.626 -5.925 1.00 29.24 O
ATOM 5 C5' A A 4 -22.928 37.136 -6.278 1.00 27.83 C
ATOM 6 C4' A A 4 -23.897 35.992 -6.454 1.00 26.94 C
ATOM 7 O4' A A 4 -23.652 35.355 -7.728 1.00 26.53 O
ATOM 8 C3' A A 4 -23.711 34.865 -5.458 1.00 26.61 C
ATOM 9 O3' A A 4 -24.333 35.180 -4.236 1.00 26.88 O
ATOM 10 C2' A A 4 -24.378 33.715 -6.195 1.00 26.41 C
ATOM 11 O2' A A 4 -25.788 33.811 -6.200 1.00 26.55 O
ATOM 12 C1' A A 4 -23.827 33.958 -7.593 1.00 26.33 C
ATOM 13 N9 A A 4 -22.543 33.306 -7.836 1.00 26.32 N
ATOM 14 C8 A A 4 -21.298 33.865 -7.730 1.00 26.36 C
ATOM 15 N7 A A 4 -20.318 33.040 -8.011 1.00 26.47 N
ATOM 16 C5 A A 4 -20.963 31.857 -8.327 1.00 26.25 C
ATOM 17 C6 A A 4 -20.484 30.589 -8.717 1.00 26.23 C
ATOM 18 N6 A A 4 -19.183 30.309 -8.856 1.00 26.21 N
ATOM 19 N1 A A 4 -21.396 29.620 -8.959 1.00 26.28 N
ATOM 20 C2 A A 4 -22.699 29.902 -8.816 1.00 26.26 C
ATOM 21 N3 A A 4 -23.266 31.055 -8.456 1.00 26.22 N
ATOM 22 C4 A A 4 -22.336 32.001 -8.224 1.00 26.26 C
ATOM 23 P G A 5 -23.841 34.440 -2.913 1.00 27.12 P
ATOM 24 OP1 G A 5 -24.180 35.314 -1.773 1.00 27.23 O
ATOM 25 OP2 G A 5 -22.436 34.004 -3.095 1.00 27.43 O
ATOM 26 O5' G A 5 -24.783 33.147 -2.899 1.00 28.36 O
TER
ATOM 1 O3' A B 4 -24.333 35.180 -4.236 1.00 26.88 O
ATOM 2 P G B 5 -23.841 34.440 -2.913 1.00 27.12 P
ATOM 3 OP1 G B 5 -24.180 35.314 -1.773 1.00 27.23 O
ATOM 4 OP2 G B 5 -22.436 34.004 -3.095 1.00 27.43 O
ATOM 5 O5' G B 5 -24.783 33.147 -2.899 1.00 28.36 O
ATOM 6 C5' G B 5 -24.216 31.851 -2.876 1.00 30.77 C
ATOM 7 C4' G B 5 -25.143 30.840 -3.512 1.00 32.57 C
ATOM 8 O4' G B 5 -24.795 30.628 -4.904 1.00 33.33 O
ATOM 9 C3' G B 5 -25.012 29.452 -2.925 1.00 33.69 C
ATOM 10 O3' G B 5 -25.737 29.361 -1.718 1.00 35.06 O
ATOM 11 C2' G B 5 -25.613 28.599 -4.035 1.00 33.89 C
ATOM 12 O2' G B 5 -27.023 28.691 -4.120 1.00 34.12 O
ATOM 13 C1' G B 5 -24.958 29.256 -5.243 1.00 33.93 C
ATOM 14 N9 G B 5 -23.665 28.646 -5.576 1.00 34.08 N
ATOM 15 C8 G B 5 -23.459 27.361 -6.040 1.00 34.12 C
ATOM 16 N7 G B 5 -22.205 27.069 -6.253 1.00 33.85 N
ATOM 17 C5 G B 5 -21.534 28.239 -5.910 1.00 33.93 C
ATOM 18 C6 G B 5 -20.149 28.539 -5.930 1.00 34.00 C
ATOM 19 O6 G B 5 -19.216 27.805 -6.268 1.00 34.07 O
ATOM 20 N1 G B 5 -19.869 29.840 -5.504 1.00 34.17 N
ATOM 21 C2 G B 5 -20.821 30.751 -5.102 1.00 34.17 C
ATOM 22 N2 G B 5 -20.371 31.961 -4.724 1.00 34.09 N
ATOM 23 N3 G B 5 -22.124 30.481 -5.077 1.00 33.92 N
ATOM 24 C4 G B 5 -22.412 29.216 -5.487 1.00 33.89 C
ATOM 25 P U B 6 -25.035 28.716 -0.433 1.00 36.16 P
ATOM 26 OP1 U B 6 -26.047 28.708 0.646 1.00 35.97 O
ATOM 27 OP2 U B 6 -23.746 29.413 -0.218 1.00 35.96 O
ATOM 28 O5' U B 6 -24.713 27.209 -0.891 1.00 36.92 O
TER
ATOM 2 OP1 A A 4 -20.607 38.683 -4.937 1.00 30.03 O
ATOM 3 OP2 A A 4 -19.178 36.758 -5.807 1.00 29.78 O
ATOM 4 O5' A A 4 -21.652 36.626 -5.925 1.00 29.24 O
ATOM 5 C5' A A 4 -22.928 37.136 -6.278 1.00 27.83 C
ATOM 6 C4' A A 4 -23.897 35.992 -6.454 1.00 26.94 C
ATOM 7 O4' A A 4 -23.652 35.355 -7.728 1.00 26.53 O
ATOM 8 C3' A A 4 -23.711 34.865 -5.458 1.00 26.61 C
ATOM 9 O3' A A 4 -24.333 35.180 -4.236 1.00 26.88 O
ATOM 10 C2' A A 4 -24.378 33.715 -6.195 1.00 26.41 C
ATOM 11 O2' A A 4 -25.788 33.811 -6.200 1.00 26.55 O
ATOM 12 C1' A A 4 -23.827 33.958 -7.593 1.00 26.33 C
ATOM 13 N9 A A 4 -22.543 33.306 -7.836 1.00 26.32 N
ATOM 14 C8 A A 4 -21.298 33.865 -7.730 1.00 26.36 C
ATOM 15 N7 A A 4 -20.318 33.040 -8.011 1.00 26.47 N
ATOM 16 C5 A A 4 -20.963 31.857 -8.327 1.00 26.25 C
ATOM 17 C6 A A 4 -20.484 30.589 -8.717 1.00 26.23 C
ATOM 18 N6 A A 4 -19.183 30.309 -8.856 1.00 26.21 N
ATOM 19 N1 A A 4 -21.396 29.620 -8.959 1.00 26.28 N
ATOM 20 C2 A A 4 -22.699 29.902 -8.816 1.00 26.26 C
ATOM 21 N3 A A 4 -23.266 31.055 -8.456 1.00 26.22 N
ATOM 22 C4 A A 4 -22.336 32.001 -8.224 1.00 26.26 C
ATOM 23 P G A 5 -23.841 34.440 -2.913 1.00 27.12 P
ATOM 24 OP1 G A 5 -24.180 35.314 -1.773 1.00 27.23 O
ATOM 25 OP2 G A 5 -22.436 34.004 -3.095 1.00 27.43 O
ATOM 26 O5' G A 5 -24.783 33.147 -2.899 1.00 28.36 O
TER
ATOM 1 O3' A B 4 -24.333 35.180 -4.236 1.00 26.88 O
ATOM 2 P G B 5 -23.841 34.440 -2.913 1.00 27.12 P
ATOM 3 OP1 G B 5 -24.180 35.314 -1.773 1.00 27.23 O
ATOM 4 OP2 G B 5 -22.436 34.004 -3.095 1.00 27.43 O
ATOM 5 O5' G B 5 -24.783 33.147 -2.899 1.00 28.36 O
ATOM 6 C5' G B 5 -24.216 31.851 -2.876 1.00 30.77 C
ATOM 7 C4' G B 5 -25.143 30.840 -3.512 1.00 32.57 C
ATOM 8 O4' G B 5 -24.795 30.628 -4.904 1.00 33.33 O
ATOM 9 C3' G B 5 -25.012 29.452 -2.925 1.00 33.69 C
ATOM 10 O3' G B 5 -25.737 29.361 -1.718 1.00 35.06 O
ATOM 11 C2' G B 5 -25.613 28.599 -4.035 1.00 33.89 C
ATOM 12 O2' G B 5 -27.023 28.691 -4.120 1.00 34.12 O
ATOM 13 C1' G B 5 -24.958 29.256 -5.243 1.00 33.93 C
ATOM 14 N9 G B 5 -23.665 28.646 -5.576 1.00 34.08 N
ATOM 15 C8 G B 5 -23.459 27.361 -6.040 1.00 34.12 C
ATOM 16 N7 G B 5 -22.205 27.069 -6.253 1.00 33.85 N
ATOM 17 C5 G B 5 -21.534 28.239 -5.910 1.00 33.93 C
ATOM 18 C6 G B 5 -20.149 28.539 -5.930 1.00 34.00 C
ATOM 19 O6 G B 5 -19.216 27.805 -6.268 1.00 34.07 O
ATOM 20 N1 G B 5 -19.869 29.840 -5.504 1.00 34.17 N
ATOM 21 C2 G B 5 -20.821 30.751 -5.102 1.00 34.17 C
ATOM 22 N2 G B 5 -20.371 31.961 -4.724 1.00 34.09 N
ATOM 23 N3 G B 5 -22.124 30.481 -5.077 1.00 33.92 N
ATOM 24 C4 G B 5 -22.412 29.216 -5.487 1.00 33.89 C
ATOM 25 P U B 6 -25.035 28.716 -0.433 1.00 36.16 P
ATOM 26 OP1 U B 6 -26.047 28.708 0.646 1.00 35.97 O
ATOM 27 OP2 U B 6 -23.746 29.413 -0.218 1.00 35.96 O
ATOM 28 O5' U B 6 -24.713 27.209 -0.891 1.00 36.92 O
TER
Atoms:
OP1: (-20.607,38.683,-4.937)
OP2: (-19.178,36.758,-5.807)
C3': (-23.711,34.865,-5.458)
C1': (-23.827,33.958,-7.593)
C5': (-22.928,37.136,-6.278)
O4': (-23.652,35.355,-7.728)
C8: (-21.298,33.865,-7.730)
O2': (-25.788,33.811,-6.200)
C6: (-20.484,30.589,-8.717)
C5: (-20.963,31.857,-8.327)
C4: (-22.336,32.001,-8.224)
P: (-20.391,37.598,-5.919)
C4': (-23.897,35.992,-6.454)
C2': (-24.378,33.715,-6.195)
C2: (-22.699,29.902,-8.816)
N1: (-21.396,29.620,-8.959)
N3: (-23.266,31.055,-8.456)
N6: (-19.183,30.309,-8.856)
N7: (-20.318,33.040,-8.011)
N9: (-22.543,33.306,-7.836)
O5': (-21.652,36.626,-5.925)
O3': (-24.333,35.180,-4.236)
OP2: (-19.178,36.758,-5.807)
C3': (-23.711,34.865,-5.458)
C1': (-23.827,33.958,-7.593)
C5': (-22.928,37.136,-6.278)
O4': (-23.652,35.355,-7.728)
C8: (-21.298,33.865,-7.730)
O2': (-25.788,33.811,-6.200)
C6: (-20.484,30.589,-8.717)
C5: (-20.963,31.857,-8.327)
C4: (-22.336,32.001,-8.224)
P: (-20.391,37.598,-5.919)
C4': (-23.897,35.992,-6.454)
C2': (-24.378,33.715,-6.195)
C2: (-22.699,29.902,-8.816)
N1: (-21.396,29.620,-8.959)
N3: (-23.266,31.055,-8.456)
N6: (-19.183,30.309,-8.856)
N7: (-20.318,33.040,-8.011)
N9: (-22.543,33.306,-7.836)
O5': (-21.652,36.626,-5.925)
O3': (-24.333,35.180,-4.236)
OP1: (-24.180,35.314,-1.773)
OP2: (-22.436,34.004,-3.095)
C3': (-25.012,29.452,-2.925)
C1': (-24.958,29.256,-5.243)
C5': (-24.216,31.851,-2.876)
O6: (-19.216,27.805,-6.268)
O4': (-24.795,30.628,-4.904)
C8: (-23.459,27.361,-6.040)
C2: (-20.821,30.751,-5.102)
C6: (-20.149,28.539,-5.930)
C5: (-21.534,28.239,-5.910)
C4: (-22.412,29.216,-5.487)
P: (-23.841,34.440,-2.913)
C4': (-25.143,30.840,-3.512)
C2': (-25.613,28.599,-4.035)
O2': (-27.023,28.691,-4.120)
N1: (-19.869,29.840,-5.504)
N2: (-20.371,31.961,-4.724)
N3: (-22.124,30.481,-5.077)
N7: (-22.205,27.069,-6.253)
N9: (-23.665,28.646,-5.576)
O5': (-24.783,33.147,-2.899)
O3': (-25.737,29.361,-1.718)
OP2: (-22.436,34.004,-3.095)
C3': (-25.012,29.452,-2.925)
C1': (-24.958,29.256,-5.243)
C5': (-24.216,31.851,-2.876)
O6: (-19.216,27.805,-6.268)
O4': (-24.795,30.628,-4.904)
C8: (-23.459,27.361,-6.040)
C2: (-20.821,30.751,-5.102)
C6: (-20.149,28.539,-5.930)
C5: (-21.534,28.239,-5.910)
C4: (-22.412,29.216,-5.487)
P: (-23.841,34.440,-2.913)
C4': (-25.143,30.840,-3.512)
C2': (-25.613,28.599,-4.035)
O2': (-27.023,28.691,-4.120)
N1: (-19.869,29.840,-5.504)
N2: (-20.371,31.961,-4.724)
N3: (-22.124,30.481,-5.077)
N7: (-22.205,27.069,-6.253)
N9: (-23.665,28.646,-5.576)
O5': (-24.783,33.147,-2.899)
O3': (-25.737,29.361,-1.718)
Image (generated by PyMOL):