Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:A497:A402
Extra
PDB:
ATOM 1 O3' A A 496 -100.491 17.640 -78.752 1.00 35.77 O
ATOM 2 P A A 497 -101.801 18.491 -78.382 1.00 30.20 P
ATOM 3 OP1 A A 497 -102.966 17.602 -78.588 1.00 30.20 O
ATOM 4 OP2 A A 497 -101.724 19.764 -79.160 1.00 30.20 O
ATOM 5 O5' A A 497 -101.603 18.782 -76.812 1.00 30.20 O
ATOM 6 C5' A A 497 -101.690 17.727 -75.844 1.00 30.20 C
ATOM 7 C4' A A 497 -101.267 18.168 -74.444 1.00 30.20 C
ATOM 8 O4' A A 497 -99.844 18.498 -74.429 1.00 30.20 O
ATOM 9 C3' A A 497 -101.988 19.398 -73.868 1.00 30.20 C
ATOM 10 O3' A A 497 -102.206 19.222 -72.456 1.00 30.20 O
ATOM 11 C2' A A 497 -100.956 20.511 -74.083 1.00 30.20 C
ATOM 12 O2' A A 497 -101.107 21.636 -73.243 1.00 30.20 O
ATOM 13 C1' A A 497 -99.677 19.750 -73.789 1.00 30.20 C
ATOM 14 N9 A A 497 -98.459 20.377 -74.285 1.00 29.63 N
ATOM 15 C8 A A 497 -98.134 20.720 -75.559 1.00 29.63 C
ATOM 16 N7 A A 497 -96.930 21.239 -75.638 1.00 29.63 N
ATOM 17 C5 A A 497 -96.435 21.239 -74.336 1.00 29.63 C
ATOM 18 C6 A A 497 -95.216 21.657 -73.750 1.00 29.63 C
ATOM 19 N6 A A 497 -94.215 22.210 -74.405 1.00 29.63 N
ATOM 20 N1 A A 497 -95.044 21.510 -72.436 1.00 29.63 N
ATOM 21 C2 A A 497 -96.049 20.971 -71.754 1.00 29.63 C
ATOM 22 N3 A A 497 -97.230 20.529 -72.185 1.00 29.63 N
ATOM 23 C4 A A 497 -97.376 20.695 -73.503 1.00 29.63 C
ATOM 24 P G A 498 -102.974 17.919 -71.881 1.00 24.28 P
ATOM 25 OP1 G A 498 -103.135 16.963 -73.001 1.00 24.28 O
ATOM 26 OP2 G A 498 -104.188 18.396 -71.176 1.00 24.28 O
ATOM 27 O5' G A 498 -101.938 17.343 -70.825 1.00 24.28 O
TER
ATOM 1 O3' C B 401 -90.902 28.479 -83.482 1.00 33.39 O
ATOM 2 P G B 402 -92.220 28.906 -82.684 1.00 18.23 P
ATOM 3 OP1 G B 402 -92.703 30.170 -83.282 1.00 18.23 O
ATOM 4 OP2 G B 402 -91.873 28.892 -81.248 1.00 18.23 O
ATOM 5 O5' G B 402 -93.221 27.723 -83.025 1.00 18.23 O
ATOM 6 C5' G B 402 -93.187 27.140 -84.311 1.00 18.23 C
ATOM 7 C4' G B 402 -93.696 25.727 -84.313 1.00 18.23 C
ATOM 8 O4' G B 402 -92.861 24.866 -83.489 1.00 18.23 O
ATOM 9 C3' G B 402 -95.077 25.522 -83.745 1.00 18.23 C
ATOM 10 O3' G B 402 -96.101 25.979 -84.619 1.00 18.23 O
ATOM 11 C2' G B 402 -95.080 24.020 -83.509 1.00 18.23 C
ATOM 12 O2' G B 402 -95.212 23.336 -84.747 1.00 18.23 O
ATOM 13 C1' G B 402 -93.650 23.803 -82.987 1.00 18.23 C
ATOM 14 N9 G B 402 -93.573 23.807 -81.503 1.00 17.95 N
ATOM 15 C8 G B 402 -93.023 24.821 -80.760 1.00 17.95 C
ATOM 16 N7 G B 402 -93.036 24.602 -79.482 1.00 17.95 N
ATOM 17 C5 G B 402 -93.622 23.357 -79.358 1.00 17.95 C
ATOM 18 C6 G B 402 -93.915 22.613 -78.178 1.00 17.95 C
ATOM 19 O6 G B 402 -93.705 22.920 -76.990 1.00 17.95 O
ATOM 20 N1 G B 402 -94.520 21.388 -78.446 1.00 17.95 N
ATOM 21 C2 G B 402 -94.802 20.935 -79.692 1.00 17.95 C
ATOM 22 N2 G B 402 -95.385 19.725 -79.663 1.00 17.95 N
ATOM 23 N3 G B 402 -94.543 21.620 -80.813 1.00 17.95 N
ATOM 24 C4 G B 402 -93.954 22.828 -80.584 1.00 17.95 C
ATOM 25 P U B 403 -97.372 26.788 -84.029 1.00 25.85 P
ATOM 26 OP1 U B 403 -98.136 27.328 -85.213 1.00 25.85 O
ATOM 27 OP2 U B 403 -96.845 27.760 -83.000 1.00 25.85 O
ATOM 28 O5' U B 403 -98.214 25.624 -83.322 1.00 25.85 O
TER
ATOM 2 P A A 497 -101.801 18.491 -78.382 1.00 30.20 P
ATOM 3 OP1 A A 497 -102.966 17.602 -78.588 1.00 30.20 O
ATOM 4 OP2 A A 497 -101.724 19.764 -79.160 1.00 30.20 O
ATOM 5 O5' A A 497 -101.603 18.782 -76.812 1.00 30.20 O
ATOM 6 C5' A A 497 -101.690 17.727 -75.844 1.00 30.20 C
ATOM 7 C4' A A 497 -101.267 18.168 -74.444 1.00 30.20 C
ATOM 8 O4' A A 497 -99.844 18.498 -74.429 1.00 30.20 O
ATOM 9 C3' A A 497 -101.988 19.398 -73.868 1.00 30.20 C
ATOM 10 O3' A A 497 -102.206 19.222 -72.456 1.00 30.20 O
ATOM 11 C2' A A 497 -100.956 20.511 -74.083 1.00 30.20 C
ATOM 12 O2' A A 497 -101.107 21.636 -73.243 1.00 30.20 O
ATOM 13 C1' A A 497 -99.677 19.750 -73.789 1.00 30.20 C
ATOM 14 N9 A A 497 -98.459 20.377 -74.285 1.00 29.63 N
ATOM 15 C8 A A 497 -98.134 20.720 -75.559 1.00 29.63 C
ATOM 16 N7 A A 497 -96.930 21.239 -75.638 1.00 29.63 N
ATOM 17 C5 A A 497 -96.435 21.239 -74.336 1.00 29.63 C
ATOM 18 C6 A A 497 -95.216 21.657 -73.750 1.00 29.63 C
ATOM 19 N6 A A 497 -94.215 22.210 -74.405 1.00 29.63 N
ATOM 20 N1 A A 497 -95.044 21.510 -72.436 1.00 29.63 N
ATOM 21 C2 A A 497 -96.049 20.971 -71.754 1.00 29.63 C
ATOM 22 N3 A A 497 -97.230 20.529 -72.185 1.00 29.63 N
ATOM 23 C4 A A 497 -97.376 20.695 -73.503 1.00 29.63 C
ATOM 24 P G A 498 -102.974 17.919 -71.881 1.00 24.28 P
ATOM 25 OP1 G A 498 -103.135 16.963 -73.001 1.00 24.28 O
ATOM 26 OP2 G A 498 -104.188 18.396 -71.176 1.00 24.28 O
ATOM 27 O5' G A 498 -101.938 17.343 -70.825 1.00 24.28 O
TER
ATOM 1 O3' C B 401 -90.902 28.479 -83.482 1.00 33.39 O
ATOM 2 P G B 402 -92.220 28.906 -82.684 1.00 18.23 P
ATOM 3 OP1 G B 402 -92.703 30.170 -83.282 1.00 18.23 O
ATOM 4 OP2 G B 402 -91.873 28.892 -81.248 1.00 18.23 O
ATOM 5 O5' G B 402 -93.221 27.723 -83.025 1.00 18.23 O
ATOM 6 C5' G B 402 -93.187 27.140 -84.311 1.00 18.23 C
ATOM 7 C4' G B 402 -93.696 25.727 -84.313 1.00 18.23 C
ATOM 8 O4' G B 402 -92.861 24.866 -83.489 1.00 18.23 O
ATOM 9 C3' G B 402 -95.077 25.522 -83.745 1.00 18.23 C
ATOM 10 O3' G B 402 -96.101 25.979 -84.619 1.00 18.23 O
ATOM 11 C2' G B 402 -95.080 24.020 -83.509 1.00 18.23 C
ATOM 12 O2' G B 402 -95.212 23.336 -84.747 1.00 18.23 O
ATOM 13 C1' G B 402 -93.650 23.803 -82.987 1.00 18.23 C
ATOM 14 N9 G B 402 -93.573 23.807 -81.503 1.00 17.95 N
ATOM 15 C8 G B 402 -93.023 24.821 -80.760 1.00 17.95 C
ATOM 16 N7 G B 402 -93.036 24.602 -79.482 1.00 17.95 N
ATOM 17 C5 G B 402 -93.622 23.357 -79.358 1.00 17.95 C
ATOM 18 C6 G B 402 -93.915 22.613 -78.178 1.00 17.95 C
ATOM 19 O6 G B 402 -93.705 22.920 -76.990 1.00 17.95 O
ATOM 20 N1 G B 402 -94.520 21.388 -78.446 1.00 17.95 N
ATOM 21 C2 G B 402 -94.802 20.935 -79.692 1.00 17.95 C
ATOM 22 N2 G B 402 -95.385 19.725 -79.663 1.00 17.95 N
ATOM 23 N3 G B 402 -94.543 21.620 -80.813 1.00 17.95 N
ATOM 24 C4 G B 402 -93.954 22.828 -80.584 1.00 17.95 C
ATOM 25 P U B 403 -97.372 26.788 -84.029 1.00 25.85 P
ATOM 26 OP1 U B 403 -98.136 27.328 -85.213 1.00 25.85 O
ATOM 27 OP2 U B 403 -96.845 27.760 -83.000 1.00 25.85 O
ATOM 28 O5' U B 403 -98.214 25.624 -83.322 1.00 25.85 O
TER
Atoms:
OP1: (-102.966,17.602,-78.588)
OP2: (-101.724,19.764,-79.160)
C3': (-101.988,19.398,-73.868)
C1': (-99.677,19.750,-73.789)
C5': (-101.690,17.727,-75.844)
O4': (-99.844,18.498,-74.429)
C8: (-98.134,20.720,-75.559)
O2': (-101.107,21.636,-73.243)
C6: (-95.216,21.657,-73.750)
C5: (-96.435,21.239,-74.336)
C4: (-97.376,20.695,-73.503)
P: (-101.801,18.491,-78.382)
C4': (-101.267,18.168,-74.444)
C2': (-100.956,20.511,-74.083)
C2: (-96.049,20.971,-71.754)
N1: (-95.044,21.510,-72.436)
N3: (-97.230,20.529,-72.185)
N6: (-94.215,22.210,-74.405)
N7: (-96.930,21.239,-75.638)
N9: (-98.459,20.377,-74.285)
O5': (-101.603,18.782,-76.812)
O3': (-102.206,19.222,-72.456)
OP2: (-101.724,19.764,-79.160)
C3': (-101.988,19.398,-73.868)
C1': (-99.677,19.750,-73.789)
C5': (-101.690,17.727,-75.844)
O4': (-99.844,18.498,-74.429)
C8: (-98.134,20.720,-75.559)
O2': (-101.107,21.636,-73.243)
C6: (-95.216,21.657,-73.750)
C5: (-96.435,21.239,-74.336)
C4: (-97.376,20.695,-73.503)
P: (-101.801,18.491,-78.382)
C4': (-101.267,18.168,-74.444)
C2': (-100.956,20.511,-74.083)
C2: (-96.049,20.971,-71.754)
N1: (-95.044,21.510,-72.436)
N3: (-97.230,20.529,-72.185)
N6: (-94.215,22.210,-74.405)
N7: (-96.930,21.239,-75.638)
N9: (-98.459,20.377,-74.285)
O5': (-101.603,18.782,-76.812)
O3': (-102.206,19.222,-72.456)
OP1: (-92.703,30.170,-83.282)
OP2: (-91.873,28.892,-81.248)
C3': (-95.077,25.522,-83.745)
C1': (-93.650,23.803,-82.987)
C5': (-93.187,27.140,-84.311)
O6: (-93.705,22.920,-76.990)
O4': (-92.861,24.866,-83.489)
C8: (-93.023,24.821,-80.760)
C2: (-94.802,20.935,-79.692)
C6: (-93.915,22.613,-78.178)
C5: (-93.622,23.357,-79.358)
C4: (-93.954,22.828,-80.584)
P: (-92.220,28.906,-82.684)
C4': (-93.696,25.727,-84.313)
C2': (-95.080,24.020,-83.509)
O2': (-95.212,23.336,-84.747)
N1: (-94.520,21.388,-78.446)
N2: (-95.385,19.725,-79.663)
N3: (-94.543,21.620,-80.813)
N7: (-93.036,24.602,-79.482)
N9: (-93.573,23.807,-81.503)
O5': (-93.221,27.723,-83.025)
O3': (-96.101,25.979,-84.619)
OP2: (-91.873,28.892,-81.248)
C3': (-95.077,25.522,-83.745)
C1': (-93.650,23.803,-82.987)
C5': (-93.187,27.140,-84.311)
O6: (-93.705,22.920,-76.990)
O4': (-92.861,24.866,-83.489)
C8: (-93.023,24.821,-80.760)
C2: (-94.802,20.935,-79.692)
C6: (-93.915,22.613,-78.178)
C5: (-93.622,23.357,-79.358)
C4: (-93.954,22.828,-80.584)
P: (-92.220,28.906,-82.684)
C4': (-93.696,25.727,-84.313)
C2': (-95.080,24.020,-83.509)
O2': (-95.212,23.336,-84.747)
N1: (-94.520,21.388,-78.446)
N2: (-95.385,19.725,-79.663)
N3: (-94.543,21.620,-80.813)
N7: (-93.036,24.602,-79.482)
N9: (-93.573,23.807,-81.503)
O5': (-93.221,27.723,-83.025)
O3': (-96.101,25.979,-84.619)
Image (generated by PyMOL):