Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2YIE:Z42:Z41
Extra
PDB:
ATOM 1 O3' G A 41 -1.542 -78.870 -73.914 1.00112.68 O
ATOM 2 P A A 42 -2.424 -77.742 -74.637 1.00125.90 P
ATOM 3 OP1 A A 42 -1.943 -76.430 -74.146 1.00106.93 O
ATOM 4 OP2 A A 42 -3.847 -78.104 -74.430 1.00117.19 O
ATOM 5 O5' A A 42 -2.040 -77.921 -76.166 1.00124.47 O
ATOM 6 C5' A A 42 -2.701 -77.172 -77.178 1.00122.45 C
ATOM 7 C4' A A 42 -1.756 -76.811 -78.291 1.00121.52 C
ATOM 8 O4' A A 42 -0.968 -75.666 -77.869 1.00113.00 O
ATOM 9 C3' A A 42 -0.773 -77.917 -78.671 1.00127.08 C
ATOM 10 O3' A A 42 -0.644 -78.047 -80.098 1.00135.57 O
ATOM 11 C2' A A 42 0.552 -77.481 -78.042 1.00120.41 C
ATOM 12 O2' A A 42 1.697 -77.840 -78.784 1.00121.47 O
ATOM 13 C1' A A 42 0.415 -75.959 -77.920 1.00111.73 C
ATOM 14 N9 A A 42 1.036 -75.428 -76.700 1.00 92.67 N
ATOM 15 C8 A A 42 0.509 -75.483 -75.431 1.00 94.41 C
ATOM 16 N7 A A 42 1.281 -74.969 -74.505 1.00 91.71 N
ATOM 17 C5 A A 42 2.407 -74.561 -75.206 1.00 87.37 C
ATOM 18 C6 A A 42 3.601 -73.939 -74.793 1.00 83.29 C
ATOM 19 N6 A A 42 3.857 -73.615 -73.525 1.00 83.25 N
ATOM 20 N1 A A 42 4.531 -73.655 -75.729 1.00 79.48 N
ATOM 21 C2 A A 42 4.270 -73.985 -76.999 1.00 79.52 C
ATOM 22 N3 A A 42 3.189 -74.571 -77.512 1.00 84.73 N
ATOM 23 C4 A A 42 2.278 -74.839 -76.557 1.00 87.83 C
ATOM 24 P U A 43 -0.704 -76.776 -81.080 1.00144.00 P
ATOM 25 OP1 U A 43 -0.553 -77.293 -82.463 1.00149.78 O
ATOM 26 OP2 U A 43 0.279 -75.786 -80.584 1.00140.16 O
ATOM 27 O5' U A 43 -2.182 -76.227 -80.870 1.00146.53 O
TER
ATOM 1 O3' G B 40 2.080 -82.287 -77.472 1.00113.13 O
ATOM 2 P G B 41 1.169 -81.054 -77.950 1.00109.07 P
ATOM 3 OP1 G B 41 -0.049 -81.627 -78.579 1.00124.42 O
ATOM 4 OP2 G B 41 2.034 -80.162 -78.757 1.00105.18 O
ATOM 5 O5' G B 41 0.789 -80.349 -76.575 1.00109.21 O
ATOM 6 C5' G B 41 0.194 -81.090 -75.520 1.00113.02 C
ATOM 7 C4' G B 41 0.348 -80.389 -74.196 1.00111.62 C
ATOM 8 O4' G B 41 1.749 -80.306 -73.846 1.00104.49 O
ATOM 9 C3' G B 41 -0.145 -78.951 -74.143 1.00104.93 C
ATOM 10 O3' G B 41 -1.542 -78.870 -73.914 1.00112.68 O
ATOM 11 C2' G B 41 0.686 -78.338 -73.019 1.00 96.51 C
ATOM 12 O2' G B 41 0.091 -78.602 -71.755 1.00 98.51 O
ATOM 13 C1' G B 41 1.997 -79.128 -73.114 1.00 98.16 C
ATOM 14 N9 G B 41 3.077 -78.372 -73.784 1.00 92.29 N
ATOM 15 C8 G B 41 3.271 -78.199 -75.136 1.00 90.02 C
ATOM 16 N7 G B 41 4.338 -77.499 -75.423 1.00 81.12 N
ATOM 17 C5 G B 41 4.897 -77.201 -74.186 1.00 78.13 C
ATOM 18 C6 G B 41 6.069 -76.466 -73.857 1.00 70.96 C
ATOM 19 O6 G B 41 6.878 -75.911 -74.623 1.00 63.69 O
ATOM 20 N1 G B 41 6.260 -76.405 -72.479 1.00 71.16 N
ATOM 21 C2 G B 41 5.438 -76.975 -71.541 1.00 75.19 C
ATOM 22 N2 G B 41 5.790 -76.808 -70.258 1.00 73.61 N
ATOM 23 N3 G B 41 4.348 -77.663 -71.835 1.00 81.95 N
ATOM 24 C4 G B 41 4.136 -77.738 -73.167 1.00 84.24 C
ATOM 25 P A B 42 -2.424 -77.742 -74.637 1.00125.90 P
ATOM 26 OP1 A B 42 -1.943 -76.430 -74.146 1.00106.93 O
ATOM 27 OP2 A B 42 -3.847 -78.104 -74.430 1.00117.19 O
ATOM 28 O5' A B 42 -2.040 -77.921 -76.166 1.00124.47 O
TER
ATOM 2 P A A 42 -2.424 -77.742 -74.637 1.00125.90 P
ATOM 3 OP1 A A 42 -1.943 -76.430 -74.146 1.00106.93 O
ATOM 4 OP2 A A 42 -3.847 -78.104 -74.430 1.00117.19 O
ATOM 5 O5' A A 42 -2.040 -77.921 -76.166 1.00124.47 O
ATOM 6 C5' A A 42 -2.701 -77.172 -77.178 1.00122.45 C
ATOM 7 C4' A A 42 -1.756 -76.811 -78.291 1.00121.52 C
ATOM 8 O4' A A 42 -0.968 -75.666 -77.869 1.00113.00 O
ATOM 9 C3' A A 42 -0.773 -77.917 -78.671 1.00127.08 C
ATOM 10 O3' A A 42 -0.644 -78.047 -80.098 1.00135.57 O
ATOM 11 C2' A A 42 0.552 -77.481 -78.042 1.00120.41 C
ATOM 12 O2' A A 42 1.697 -77.840 -78.784 1.00121.47 O
ATOM 13 C1' A A 42 0.415 -75.959 -77.920 1.00111.73 C
ATOM 14 N9 A A 42 1.036 -75.428 -76.700 1.00 92.67 N
ATOM 15 C8 A A 42 0.509 -75.483 -75.431 1.00 94.41 C
ATOM 16 N7 A A 42 1.281 -74.969 -74.505 1.00 91.71 N
ATOM 17 C5 A A 42 2.407 -74.561 -75.206 1.00 87.37 C
ATOM 18 C6 A A 42 3.601 -73.939 -74.793 1.00 83.29 C
ATOM 19 N6 A A 42 3.857 -73.615 -73.525 1.00 83.25 N
ATOM 20 N1 A A 42 4.531 -73.655 -75.729 1.00 79.48 N
ATOM 21 C2 A A 42 4.270 -73.985 -76.999 1.00 79.52 C
ATOM 22 N3 A A 42 3.189 -74.571 -77.512 1.00 84.73 N
ATOM 23 C4 A A 42 2.278 -74.839 -76.557 1.00 87.83 C
ATOM 24 P U A 43 -0.704 -76.776 -81.080 1.00144.00 P
ATOM 25 OP1 U A 43 -0.553 -77.293 -82.463 1.00149.78 O
ATOM 26 OP2 U A 43 0.279 -75.786 -80.584 1.00140.16 O
ATOM 27 O5' U A 43 -2.182 -76.227 -80.870 1.00146.53 O
TER
ATOM 1 O3' G B 40 2.080 -82.287 -77.472 1.00113.13 O
ATOM 2 P G B 41 1.169 -81.054 -77.950 1.00109.07 P
ATOM 3 OP1 G B 41 -0.049 -81.627 -78.579 1.00124.42 O
ATOM 4 OP2 G B 41 2.034 -80.162 -78.757 1.00105.18 O
ATOM 5 O5' G B 41 0.789 -80.349 -76.575 1.00109.21 O
ATOM 6 C5' G B 41 0.194 -81.090 -75.520 1.00113.02 C
ATOM 7 C4' G B 41 0.348 -80.389 -74.196 1.00111.62 C
ATOM 8 O4' G B 41 1.749 -80.306 -73.846 1.00104.49 O
ATOM 9 C3' G B 41 -0.145 -78.951 -74.143 1.00104.93 C
ATOM 10 O3' G B 41 -1.542 -78.870 -73.914 1.00112.68 O
ATOM 11 C2' G B 41 0.686 -78.338 -73.019 1.00 96.51 C
ATOM 12 O2' G B 41 0.091 -78.602 -71.755 1.00 98.51 O
ATOM 13 C1' G B 41 1.997 -79.128 -73.114 1.00 98.16 C
ATOM 14 N9 G B 41 3.077 -78.372 -73.784 1.00 92.29 N
ATOM 15 C8 G B 41 3.271 -78.199 -75.136 1.00 90.02 C
ATOM 16 N7 G B 41 4.338 -77.499 -75.423 1.00 81.12 N
ATOM 17 C5 G B 41 4.897 -77.201 -74.186 1.00 78.13 C
ATOM 18 C6 G B 41 6.069 -76.466 -73.857 1.00 70.96 C
ATOM 19 O6 G B 41 6.878 -75.911 -74.623 1.00 63.69 O
ATOM 20 N1 G B 41 6.260 -76.405 -72.479 1.00 71.16 N
ATOM 21 C2 G B 41 5.438 -76.975 -71.541 1.00 75.19 C
ATOM 22 N2 G B 41 5.790 -76.808 -70.258 1.00 73.61 N
ATOM 23 N3 G B 41 4.348 -77.663 -71.835 1.00 81.95 N
ATOM 24 C4 G B 41 4.136 -77.738 -73.167 1.00 84.24 C
ATOM 25 P A B 42 -2.424 -77.742 -74.637 1.00125.90 P
ATOM 26 OP1 A B 42 -1.943 -76.430 -74.146 1.00106.93 O
ATOM 27 OP2 A B 42 -3.847 -78.104 -74.430 1.00117.19 O
ATOM 28 O5' A B 42 -2.040 -77.921 -76.166 1.00124.47 O
TER
Atoms:
OP1: (-1.943,-76.430,-74.146)
OP2: (-3.847,-78.104,-74.430)
C3': (-0.773,-77.917,-78.671)
C1': (0.415,-75.959,-77.920)
C5': (-2.701,-77.172,-77.178)
O4': (-0.968,-75.666,-77.869)
C8: (0.509,-75.483,-75.431)
O2': (1.697,-77.840,-78.784)
C6: (3.601,-73.939,-74.793)
C5: (2.407,-74.561,-75.206)
C4: (2.278,-74.839,-76.557)
P: (-2.424,-77.742,-74.637)
C4': (-1.756,-76.811,-78.291)
C2': (0.552,-77.481,-78.042)
C2: (4.270,-73.985,-76.999)
N1: (4.531,-73.655,-75.729)
N3: (3.189,-74.571,-77.512)
N6: (3.857,-73.615,-73.525)
N7: (1.281,-74.969,-74.505)
N9: (1.036,-75.428,-76.700)
O5': (-2.040,-77.921,-76.166)
O3': (-0.644,-78.047,-80.098)
OP2: (-3.847,-78.104,-74.430)
C3': (-0.773,-77.917,-78.671)
C1': (0.415,-75.959,-77.920)
C5': (-2.701,-77.172,-77.178)
O4': (-0.968,-75.666,-77.869)
C8: (0.509,-75.483,-75.431)
O2': (1.697,-77.840,-78.784)
C6: (3.601,-73.939,-74.793)
C5: (2.407,-74.561,-75.206)
C4: (2.278,-74.839,-76.557)
P: (-2.424,-77.742,-74.637)
C4': (-1.756,-76.811,-78.291)
C2': (0.552,-77.481,-78.042)
C2: (4.270,-73.985,-76.999)
N1: (4.531,-73.655,-75.729)
N3: (3.189,-74.571,-77.512)
N6: (3.857,-73.615,-73.525)
N7: (1.281,-74.969,-74.505)
N9: (1.036,-75.428,-76.700)
O5': (-2.040,-77.921,-76.166)
O3': (-0.644,-78.047,-80.098)
OP1: (-0.049,-81.627,-78.579)
OP2: (2.034,-80.162,-78.757)
C3': (-0.145,-78.951,-74.143)
C1': (1.997,-79.128,-73.114)
C5': (0.194,-81.090,-75.520)
O6: (6.878,-75.911,-74.623)
O4': (1.749,-80.306,-73.846)
C8: (3.271,-78.199,-75.136)
C2: (5.438,-76.975,-71.541)
C6: (6.069,-76.466,-73.857)
C5: (4.897,-77.201,-74.186)
C4: (4.136,-77.738,-73.167)
P: (1.169,-81.054,-77.950)
C4': (0.348,-80.389,-74.196)
C2': (0.686,-78.338,-73.019)
O2': (0.091,-78.602,-71.755)
N1: (6.260,-76.405,-72.479)
N2: (5.790,-76.808,-70.258)
N3: (4.348,-77.663,-71.835)
N7: (4.338,-77.499,-75.423)
N9: (3.077,-78.372,-73.784)
O5': (0.789,-80.349,-76.575)
O3': (-1.542,-78.870,-73.914)
OP2: (2.034,-80.162,-78.757)
C3': (-0.145,-78.951,-74.143)
C1': (1.997,-79.128,-73.114)
C5': (0.194,-81.090,-75.520)
O6: (6.878,-75.911,-74.623)
O4': (1.749,-80.306,-73.846)
C8: (3.271,-78.199,-75.136)
C2: (5.438,-76.975,-71.541)
C6: (6.069,-76.466,-73.857)
C5: (4.897,-77.201,-74.186)
C4: (4.136,-77.738,-73.167)
P: (1.169,-81.054,-77.950)
C4': (0.348,-80.389,-74.196)
C2': (0.686,-78.338,-73.019)
O2': (0.091,-78.602,-71.755)
N1: (6.260,-76.405,-72.479)
N2: (5.790,-76.808,-70.258)
N3: (4.348,-77.663,-71.835)
N7: (4.338,-77.499,-75.423)
N9: (3.077,-78.372,-73.784)
O5': (0.789,-80.349,-76.575)
O3': (-1.542,-78.870,-73.914)
Image (generated by PyMOL):