ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJW:01492:01491

Extra

PDB:
ATOM 1 O3' G A1491 105.520 167.803 55.532 1.00 44.81 O
ATOM 2 P A A1492 105.376 166.706 56.688 1.00 46.11 P
ATOM 3 OP1 A A1492 104.832 165.482 56.039 1.00 45.11 O
ATOM 4 OP2 A A1492 104.656 167.331 57.834 1.00 44.60 O
ATOM 5 O5' A A1492 106.869 166.402 57.142 1.00 43.82 O
ATOM 6 C5' A A1492 107.145 165.925 58.467 1.00 44.78 C
ATOM 7 C4' A A1492 108.465 165.204 58.487 1.00 45.13 C
ATOM 8 O4' A A1492 108.382 164.078 57.576 1.00 45.16 O
ATOM 9 C3' A A1492 109.660 166.028 58.022 1.00 45.91 C
ATOM 10 O3' A A1492 110.839 165.530 58.658 1.00 45.60 O
ATOM 11 C2' A A1492 109.710 165.699 56.533 1.00 46.18 C
ATOM 12 O2' A A1492 110.980 165.913 55.945 1.00 49.48 O
ATOM 13 C1' A A1492 109.355 164.214 56.563 1.00 44.51 C
ATOM 14 N9 A A1492 108.805 163.664 55.328 1.00 41.29 N
ATOM 15 C8 A A1492 107.653 164.010 54.671 1.00 40.66 C
ATOM 16 N7 A A1492 107.427 163.300 53.593 1.00 39.56 N
ATOM 17 C5 A A1492 108.505 162.433 53.534 1.00 38.42 C
ATOM 18 C6 A A1492 108.850 161.417 52.632 1.00 38.39 C
ATOM 19 N6 A A1492 108.118 161.093 51.563 1.00 36.87 N
ATOM 20 N1 A A1492 109.988 160.733 52.867 1.00 38.75 N
ATOM 21 C2 A A1492 110.724 161.060 53.940 1.00 38.87 C
ATOM 22 N3 A A1492 110.504 161.995 54.857 1.00 37.76 N
ATOM 23 C4 A A1492 109.365 162.651 54.593 1.00 38.71 C
ATOM 24 P C A1493 111.293 166.108 60.086 1.00 44.59 P
ATOM 25 OP1 C A1493 110.595 167.401 60.332 1.00 43.86 O
ATOM 26 OP2 C A1493 112.772 166.059 60.090 1.00 46.05 O
ATOM 27 O5' C A1493 110.782 165.013 61.128 1.00 44.20 O
TER

ATOM 1 O3' U B1490 110.935 170.660 55.022 1.00 41.76 O
ATOM 2 P G B1491 110.354 169.518 55.989 1.00 41.25 P
ATOM 3 OP1 G B1491 109.857 170.218 57.206 1.00 39.50 O
ATOM 4 OP2 G B1491 111.374 168.444 56.117 1.00 38.34 O
ATOM 5 O5' G B1491 109.110 168.921 55.190 1.00 41.51 O
ATOM 6 C5' G B1491 107.965 169.739 54.896 1.00 41.75 C
ATOM 7 C4' G B1491 106.979 168.990 54.027 1.00 42.00 C
ATOM 8 O4' G B1491 107.572 168.675 52.742 1.00 41.88 O
ATOM 9 C3' G B1491 106.520 167.645 54.545 1.00 42.70 C
ATOM 10 O3' G B1491 105.520 167.803 55.532 1.00 44.81 O
ATOM 11 C2' G B1491 106.005 166.981 53.278 1.00 41.42 C
ATOM 12 O2' G B1491 104.742 167.476 52.882 1.00 40.29 O
ATOM 13 C1' G B1491 107.052 167.445 52.266 1.00 40.26 C
ATOM 14 N9 G B1491 108.164 166.513 52.135 1.00 38.91 N
ATOM 15 C8 G B1491 109.322 166.503 52.875 1.00 38.98 C
ATOM 16 N7 G B1491 110.140 165.546 52.533 1.00 40.65 N
ATOM 17 C5 G B1491 109.485 164.886 51.502 1.00 41.18 C
ATOM 18 C6 G B1491 109.885 163.764 50.724 1.00 42.13 C
ATOM 19 O6 G B1491 110.936 163.118 50.785 1.00 43.81 O
ATOM 20 N1 G B1491 108.915 163.414 49.794 1.00 42.43 N
ATOM 21 C2 G B1491 107.716 164.057 49.624 1.00 41.81 C
ATOM 22 N2 G B1491 106.914 163.550 48.679 1.00 40.46 N
ATOM 23 N3 G B1491 107.333 165.114 50.332 1.00 40.30 N
ATOM 24 C4 G B1491 108.260 165.469 51.248 1.00 39.86 C
ATOM 25 P A B1492 105.376 166.706 56.688 1.00 46.11 P
ATOM 26 OP1 A B1492 104.832 165.482 56.039 1.00 45.11 O
ATOM 27 OP2 A B1492 104.656 167.331 57.834 1.00 44.60 O
ATOM 28 O5' A B1492 106.869 166.402 57.142 1.00 43.82 O
TER

Atoms:
OP1: (104.832,165.482,56.039)
OP2: (104.656,167.331,57.834)
C3': (109.660,166.028,58.022)
C1': (109.355,164.214,56.563)
C5': (107.145,165.925,58.467)
O4': (108.382,164.078,57.576)
C8: (107.653,164.010,54.671)
O2': (110.980,165.913,55.945)
C6: (108.850,161.417,52.632)
C5: (108.505,162.433,53.534)
C4: (109.365,162.651,54.593)
P: (105.376,166.706,56.688)
C4': (108.465,165.204,58.487)
C2': (109.710,165.699,56.533)
C2: (110.724,161.060,53.940)
N1: (109.988,160.733,52.867)
N3: (110.504,161.995,54.857)
N6: (108.118,161.093,51.563)
N7: (107.427,163.300,53.593)
N9: (108.805,163.664,55.328)
O5': (106.869,166.402,57.142)
O3': (110.839,165.530,58.658)
OP1: (109.857,170.218,57.206)
OP2: (111.374,168.444,56.117)
C3': (106.520,167.645,54.545)
C1': (107.052,167.445,52.266)
C5': (107.965,169.739,54.896)
O6: (110.936,163.118,50.785)
O4': (107.572,168.675,52.742)
C8: (109.322,166.503,52.875)
C2: (107.716,164.057,49.624)
C6: (109.885,163.764,50.724)
C5: (109.485,164.886,51.502)
C4: (108.260,165.469,51.248)
P: (110.354,169.518,55.989)
C4': (106.979,168.990,54.027)
C2': (106.005,166.981,53.278)
O2': (104.742,167.476,52.882)
N1: (108.915,163.414,49.794)
N2: (106.914,163.550,48.679)
N3: (107.333,165.114,50.332)
N7: (110.140,165.546,52.533)
N9: (108.164,166.513,52.135)
O5': (109.110,168.921,55.190)
O3': (105.520,167.803,55.532)
Image (generated by PyMOL):
PyMOL image
show in jmol