Doublet info:
Details
Nucleotide types:
AG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:049:046
Extra
PDB:
ATOM 1 O3' C A 48 49.285 170.356 45.334 1.00 68.33 O
ATOM 2 P A A 49 50.620 169.468 45.292 1.00 71.51 P
ATOM 3 OP1 A A 49 51.311 169.679 46.601 1.00 70.26 O
ATOM 4 OP2 A A 49 51.342 169.752 44.017 1.00 70.17 O
ATOM 5 O5' A A 49 50.079 167.969 45.214 1.00 68.63 O
ATOM 6 C5' A A 49 49.533 167.323 46.377 1.00 63.48 C
ATOM 7 C4' A A 49 49.746 165.830 46.303 1.00 59.65 C
ATOM 8 O4' A A 49 48.704 165.227 45.487 1.00 58.59 O
ATOM 9 C3' A A 49 51.084 165.351 45.734 1.00 56.85 C
ATOM 10 O3' A A 49 51.578 164.255 46.505 1.00 55.80 O
ATOM 11 C2' A A 49 50.689 164.872 44.337 1.00 55.87 C
ATOM 12 O2' A A 49 51.543 163.861 43.861 1.00 53.95 O
ATOM 13 C1' A A 49 49.293 164.311 44.598 1.00 57.01 C
ATOM 14 N9 A A 49 48.416 164.152 43.435 1.00 57.60 N
ATOM 15 C8 A A 49 48.267 164.982 42.355 1.00 58.19 C
ATOM 16 N7 A A 49 47.430 164.531 41.449 1.00 58.23 N
ATOM 17 C5 A A 49 46.988 163.327 41.975 1.00 59.25 C
ATOM 18 C6 A A 49 46.092 162.351 41.492 1.00 59.74 C
ATOM 19 N6 A A 49 45.475 162.430 40.312 1.00 59.85 N
ATOM 20 N1 A A 49 45.858 161.271 42.270 1.00 60.14 N
ATOM 21 C2 A A 49 46.491 161.179 43.442 1.00 59.48 C
ATOM 22 N3 A A 49 47.363 162.020 43.999 1.00 60.31 N
ATOM 23 C4 A A 49 47.573 163.087 43.206 1.00 59.20 C
ATOM 24 P A A 50 53.054 164.323 47.157 1.00 54.22 P
ATOM 25 OP1 A A 50 53.101 165.430 48.144 1.00 53.99 O
ATOM 26 OP2 A A 50 54.060 164.266 46.071 1.00 53.75 O
ATOM 27 O5' A A 50 53.145 162.953 47.953 1.00 53.64 O
TER
ATOM 1 O3' U B 45 55.390 165.561 35.996 1.00 54.38 O
ATOM 2 P G B 46 54.487 166.563 36.865 1.00 55.00 P
ATOM 3 OP1 G B 46 54.244 167.767 36.040 1.00 55.70 O
ATOM 4 OP2 G B 46 55.102 166.707 38.201 1.00 56.35 O
ATOM 5 O5' G B 46 53.104 165.794 37.005 1.00 54.35 O
ATOM 6 C5' G B 46 52.425 165.333 35.839 1.00 53.60 C
ATOM 7 C4' G B 46 50.942 165.385 36.050 1.00 54.27 C
ATOM 8 O4' G B 46 50.546 164.300 36.925 1.00 54.94 O
ATOM 9 C3' G B 46 50.389 166.661 36.675 1.00 54.61 C
ATOM 10 O3' G B 46 49.130 166.945 36.076 1.00 57.10 O
ATOM 11 C2' G B 46 50.173 166.254 38.129 1.00 53.33 C
ATOM 12 O2' G B 46 49.151 166.996 38.755 1.00 52.20 O
ATOM 13 C1' G B 46 49.725 164.809 37.952 1.00 54.40 C
ATOM 14 N9 G B 46 49.838 163.928 39.112 1.00 55.83 N
ATOM 15 C8 G B 46 50.448 164.191 40.316 1.00 55.21 C
ATOM 16 N7 G B 46 50.381 163.190 41.153 1.00 55.12 N
ATOM 17 C5 G B 46 49.689 162.205 40.459 1.00 55.72 C
ATOM 18 C6 G B 46 49.322 160.889 40.848 1.00 54.99 C
ATOM 19 O6 G B 46 49.536 160.316 41.920 1.00 55.21 O
ATOM 20 N1 G B 46 48.635 160.229 39.835 1.00 54.84 N
ATOM 21 C2 G B 46 48.337 160.760 38.607 1.00 54.85 C
ATOM 22 N2 G B 46 47.671 159.957 37.765 1.00 54.87 N
ATOM 23 N3 G B 46 48.668 161.983 38.230 1.00 54.56 N
ATOM 24 C4 G B 46 49.342 162.645 39.200 1.00 55.90 C
ATOM 25 P C B 47 48.900 168.352 35.339 1.00 57.41 P
ATOM 26 OP1 C B 47 47.590 168.297 34.642 1.00 58.19 O
ATOM 27 OP2 C B 47 50.136 168.657 34.567 1.00 55.94 O
ATOM 28 O5' C B 47 48.762 169.392 36.537 1.00 57.26 O
TER
ATOM 2 P A A 49 50.620 169.468 45.292 1.00 71.51 P
ATOM 3 OP1 A A 49 51.311 169.679 46.601 1.00 70.26 O
ATOM 4 OP2 A A 49 51.342 169.752 44.017 1.00 70.17 O
ATOM 5 O5' A A 49 50.079 167.969 45.214 1.00 68.63 O
ATOM 6 C5' A A 49 49.533 167.323 46.377 1.00 63.48 C
ATOM 7 C4' A A 49 49.746 165.830 46.303 1.00 59.65 C
ATOM 8 O4' A A 49 48.704 165.227 45.487 1.00 58.59 O
ATOM 9 C3' A A 49 51.084 165.351 45.734 1.00 56.85 C
ATOM 10 O3' A A 49 51.578 164.255 46.505 1.00 55.80 O
ATOM 11 C2' A A 49 50.689 164.872 44.337 1.00 55.87 C
ATOM 12 O2' A A 49 51.543 163.861 43.861 1.00 53.95 O
ATOM 13 C1' A A 49 49.293 164.311 44.598 1.00 57.01 C
ATOM 14 N9 A A 49 48.416 164.152 43.435 1.00 57.60 N
ATOM 15 C8 A A 49 48.267 164.982 42.355 1.00 58.19 C
ATOM 16 N7 A A 49 47.430 164.531 41.449 1.00 58.23 N
ATOM 17 C5 A A 49 46.988 163.327 41.975 1.00 59.25 C
ATOM 18 C6 A A 49 46.092 162.351 41.492 1.00 59.74 C
ATOM 19 N6 A A 49 45.475 162.430 40.312 1.00 59.85 N
ATOM 20 N1 A A 49 45.858 161.271 42.270 1.00 60.14 N
ATOM 21 C2 A A 49 46.491 161.179 43.442 1.00 59.48 C
ATOM 22 N3 A A 49 47.363 162.020 43.999 1.00 60.31 N
ATOM 23 C4 A A 49 47.573 163.087 43.206 1.00 59.20 C
ATOM 24 P A A 50 53.054 164.323 47.157 1.00 54.22 P
ATOM 25 OP1 A A 50 53.101 165.430 48.144 1.00 53.99 O
ATOM 26 OP2 A A 50 54.060 164.266 46.071 1.00 53.75 O
ATOM 27 O5' A A 50 53.145 162.953 47.953 1.00 53.64 O
TER
ATOM 1 O3' U B 45 55.390 165.561 35.996 1.00 54.38 O
ATOM 2 P G B 46 54.487 166.563 36.865 1.00 55.00 P
ATOM 3 OP1 G B 46 54.244 167.767 36.040 1.00 55.70 O
ATOM 4 OP2 G B 46 55.102 166.707 38.201 1.00 56.35 O
ATOM 5 O5' G B 46 53.104 165.794 37.005 1.00 54.35 O
ATOM 6 C5' G B 46 52.425 165.333 35.839 1.00 53.60 C
ATOM 7 C4' G B 46 50.942 165.385 36.050 1.00 54.27 C
ATOM 8 O4' G B 46 50.546 164.300 36.925 1.00 54.94 O
ATOM 9 C3' G B 46 50.389 166.661 36.675 1.00 54.61 C
ATOM 10 O3' G B 46 49.130 166.945 36.076 1.00 57.10 O
ATOM 11 C2' G B 46 50.173 166.254 38.129 1.00 53.33 C
ATOM 12 O2' G B 46 49.151 166.996 38.755 1.00 52.20 O
ATOM 13 C1' G B 46 49.725 164.809 37.952 1.00 54.40 C
ATOM 14 N9 G B 46 49.838 163.928 39.112 1.00 55.83 N
ATOM 15 C8 G B 46 50.448 164.191 40.316 1.00 55.21 C
ATOM 16 N7 G B 46 50.381 163.190 41.153 1.00 55.12 N
ATOM 17 C5 G B 46 49.689 162.205 40.459 1.00 55.72 C
ATOM 18 C6 G B 46 49.322 160.889 40.848 1.00 54.99 C
ATOM 19 O6 G B 46 49.536 160.316 41.920 1.00 55.21 O
ATOM 20 N1 G B 46 48.635 160.229 39.835 1.00 54.84 N
ATOM 21 C2 G B 46 48.337 160.760 38.607 1.00 54.85 C
ATOM 22 N2 G B 46 47.671 159.957 37.765 1.00 54.87 N
ATOM 23 N3 G B 46 48.668 161.983 38.230 1.00 54.56 N
ATOM 24 C4 G B 46 49.342 162.645 39.200 1.00 55.90 C
ATOM 25 P C B 47 48.900 168.352 35.339 1.00 57.41 P
ATOM 26 OP1 C B 47 47.590 168.297 34.642 1.00 58.19 O
ATOM 27 OP2 C B 47 50.136 168.657 34.567 1.00 55.94 O
ATOM 28 O5' C B 47 48.762 169.392 36.537 1.00 57.26 O
TER
Atoms:
OP1: (51.311,169.679,46.601)
OP2: (51.342,169.752,44.017)
C3': (51.084,165.351,45.734)
C1': (49.293,164.311,44.598)
C5': (49.533,167.323,46.377)
O4': (48.704,165.227,45.487)
C8: (48.267,164.982,42.355)
O2': (51.543,163.861,43.861)
C6: (46.092,162.351,41.492)
C5: (46.988,163.327,41.975)
C4: (47.573,163.087,43.206)
P: (50.620,169.468,45.292)
C4': (49.746,165.830,46.303)
C2': (50.689,164.872,44.337)
C2: (46.491,161.179,43.442)
N1: (45.858,161.271,42.270)
N3: (47.363,162.020,43.999)
N6: (45.475,162.430,40.312)
N7: (47.430,164.531,41.449)
N9: (48.416,164.152,43.435)
O5': (50.079,167.969,45.214)
O3': (51.578,164.255,46.505)
OP2: (51.342,169.752,44.017)
C3': (51.084,165.351,45.734)
C1': (49.293,164.311,44.598)
C5': (49.533,167.323,46.377)
O4': (48.704,165.227,45.487)
C8: (48.267,164.982,42.355)
O2': (51.543,163.861,43.861)
C6: (46.092,162.351,41.492)
C5: (46.988,163.327,41.975)
C4: (47.573,163.087,43.206)
P: (50.620,169.468,45.292)
C4': (49.746,165.830,46.303)
C2': (50.689,164.872,44.337)
C2: (46.491,161.179,43.442)
N1: (45.858,161.271,42.270)
N3: (47.363,162.020,43.999)
N6: (45.475,162.430,40.312)
N7: (47.430,164.531,41.449)
N9: (48.416,164.152,43.435)
O5': (50.079,167.969,45.214)
O3': (51.578,164.255,46.505)
OP1: (54.244,167.767,36.040)
OP2: (55.102,166.707,38.201)
C3': (50.389,166.661,36.675)
C1': (49.725,164.809,37.952)
C5': (52.425,165.333,35.839)
O6: (49.536,160.316,41.920)
O4': (50.546,164.300,36.925)
C8: (50.448,164.191,40.316)
C2: (48.337,160.760,38.607)
C6: (49.322,160.889,40.848)
C5: (49.689,162.205,40.459)
C4: (49.342,162.645,39.200)
P: (54.487,166.563,36.865)
C4': (50.942,165.385,36.050)
C2': (50.173,166.254,38.129)
O2': (49.151,166.996,38.755)
N1: (48.635,160.229,39.835)
N2: (47.671,159.957,37.765)
N3: (48.668,161.983,38.230)
N7: (50.381,163.190,41.153)
N9: (49.838,163.928,39.112)
O5': (53.104,165.794,37.005)
O3': (49.130,166.945,36.076)
OP2: (55.102,166.707,38.201)
C3': (50.389,166.661,36.675)
C1': (49.725,164.809,37.952)
C5': (52.425,165.333,35.839)
O6: (49.536,160.316,41.920)
O4': (50.546,164.300,36.925)
C8: (50.448,164.191,40.316)
C2: (48.337,160.760,38.607)
C6: (49.322,160.889,40.848)
C5: (49.689,162.205,40.459)
C4: (49.342,162.645,39.200)
P: (54.487,166.563,36.865)
C4': (50.942,165.385,36.050)
C2': (50.173,166.254,38.129)
O2': (49.151,166.996,38.755)
N1: (48.635,160.229,39.835)
N2: (47.671,159.957,37.765)
N3: (48.668,161.983,38.230)
N7: (50.381,163.190,41.153)
N9: (49.838,163.928,39.112)
O5': (53.104,165.794,37.005)
O3': (49.130,166.945,36.076)
Image (generated by PyMOL):