ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHK:A678:A676

Extra

PDB:
ATOM 1 O3' G A 677 181.822 -65.696-133.941 1.00 63.07 O
ATOM 2 P A A 678 180.251 -65.358-134.108 1.00 46.91 P
ATOM 3 OP1 A A 678 179.590 -66.634-134.468 1.00 32.70 O
ATOM 4 OP2 A A 678 180.115 -64.199-135.039 1.00 39.76 O
ATOM 5 O5' A A 678 179.827 -64.905-132.647 1.00 34.27 O
ATOM 6 C5' A A 678 179.564 -65.869-131.653 1.00 33.14 C
ATOM 7 C4' A A 678 179.212 -65.233-130.345 1.00 27.32 C
ATOM 8 O4' A A 678 180.254 -64.318-129.976 1.00 33.04 O
ATOM 9 C3' A A 678 177.917 -64.442-130.333 1.00 36.94 C
ATOM 10 O3' A A 678 177.307 -64.587-129.050 1.00 40.63 O
ATOM 11 C2' A A 678 178.374 -62.998-130.543 1.00 39.90 C
ATOM 12 O2' A A 678 177.517 -62.019-129.969 1.00 47.70 O
ATOM 13 C1' A A 678 179.753 -62.994-129.888 1.00 37.11 C
ATOM 14 N9 A A 678 180.723 -62.134-130.556 1.00 38.23 N
ATOM 15 C8 A A 678 180.956 -62.034-131.908 1.00 40.70 C
ATOM 16 N7 A A 678 181.940 -61.213-132.188 1.00 44.54 N
ATOM 17 C5 A A 678 182.397 -60.789-130.943 1.00 37.24 C
ATOM 18 C6 A A 678 183.430 -59.922-130.551 1.00 36.48 C
ATOM 19 N6 A A 678 184.225 -59.299-131.412 1.00 37.87 N
ATOM 20 N1 A A 678 183.625 -59.702-129.229 1.00 40.45 N
ATOM 21 C2 A A 678 182.821 -60.352-128.377 1.00 38.64 C
ATOM 22 N3 A A 678 181.824 -61.203-128.632 1.00 34.63 N
ATOM 23 C4 A A 678 181.658 -61.362-129.939 1.00 31.93 C
ATOM 24 P C A 679 176.953 -66.066-128.511 1.00 44.97 P
ATOM 25 OP1 C A 679 176.651 -66.934-129.706 1.00 30.08 O
ATOM 26 OP2 C A 679 175.899 -65.915-127.479 1.00 50.12 O
ATOM 27 O5' C A 679 178.323 -66.541-127.822 1.00 26.88 O
TER

ATOM 1 O3' U B 675 176.917 -57.479-138.218 1.00 43.34 O
ATOM 2 P G B 676 177.616 -58.888-138.516 1.00 53.65 P
ATOM 3 OP1 G B 676 177.395 -59.206-139.964 1.00 58.30 O
ATOM 4 OP2 G B 676 177.142 -59.864-137.488 1.00 43.43 O
ATOM 5 O5' G B 676 179.123 -58.548-138.271 1.00 40.43 O
ATOM 6 C5' G B 676 179.896 -59.402-137.490 1.00 46.46 C
ATOM 7 C4' G B 676 180.810 -58.631-136.613 1.00 47.27 C
ATOM 8 O4' G B 676 180.088 -58.014-135.528 1.00 56.85 O
ATOM 9 C3' G B 676 181.876 -59.447-135.959 1.00 42.73 C
ATOM 10 O3' G B 676 182.917 -59.635-136.865 1.00 63.38 O
ATOM 11 C2' G B 676 182.260 -58.609-134.742 1.00 47.60 C
ATOM 12 O2' G B 676 183.235 -57.637-135.093 1.00 61.01 O
ATOM 13 C1' G B 676 180.936 -57.883-134.415 1.00 46.66 C
ATOM 14 N9 G B 676 180.252 -58.458-133.255 1.00 39.63 N
ATOM 15 C8 G B 676 179.248 -59.391-133.293 1.00 43.48 C
ATOM 16 N7 G B 676 178.825 -59.737-132.110 1.00 44.08 N
ATOM 17 C5 G B 676 179.609 -58.978-131.257 1.00 38.98 C
ATOM 18 C6 G B 676 179.598 -58.926-129.851 1.00 36.08 C
ATOM 19 O6 G B 676 178.891 -59.548-129.069 1.00 43.64 O
ATOM 20 N1 G B 676 180.509 -58.022-129.370 1.00 34.27 N
ATOM 21 C2 G B 676 181.349 -57.279-130.153 1.00 39.88 C
ATOM 22 N2 G B 676 182.160 -56.483-129.433 1.00 36.49 N
ATOM 23 N3 G B 676 181.392 -57.303-131.493 1.00 36.86 N
ATOM 24 C4 G B 676 180.484 -58.174-131.953 1.00 37.27 C
ATOM 25 P G B 677 183.773 -60.974-136.886 1.00 99.71 P
ATOM 26 OP1 G B 677 184.670 -60.923-135.647 1.00 52.60 O
ATOM 27 OP2 G B 677 184.389 -61.055-138.240 1.00 82.47 O
ATOM 28 O5' G B 677 182.702 -62.134-136.750 1.00 58.39 O
TER

Atoms:
OP1: (179.590,-66.634,-134.468)
OP2: (180.115,-64.199,-135.039)
C3': (177.917,-64.442,-130.333)
C1': (179.753,-62.994,-129.888)
C5': (179.564,-65.869,-131.653)
O4': (180.254,-64.318,-129.976)
C8: (180.956,-62.034,-131.908)
O2': (177.517,-62.019,-129.969)
C6: (183.430,-59.922,-130.551)
C5: (182.397,-60.789,-130.943)
C4: (181.658,-61.362,-129.939)
P: (180.251,-65.358,-134.108)
C4': (179.212,-65.233,-130.345)
C2': (178.374,-62.998,-130.543)
C2: (182.821,-60.352,-128.377)
N1: (183.625,-59.702,-129.229)
N3: (181.824,-61.203,-128.632)
N6: (184.225,-59.299,-131.412)
N7: (181.940,-61.213,-132.188)
N9: (180.723,-62.134,-130.556)
O5': (179.827,-64.905,-132.647)
O3': (177.307,-64.587,-129.050)
OP1: (177.395,-59.206,-139.964)
OP2: (177.142,-59.864,-137.488)
C3': (181.876,-59.447,-135.959)
C1': (180.936,-57.883,-134.415)
C5': (179.896,-59.402,-137.490)
O6: (178.891,-59.548,-129.069)
O4': (180.088,-58.014,-135.528)
C8: (179.248,-59.391,-133.293)
C2: (181.349,-57.279,-130.153)
C6: (179.598,-58.926,-129.851)
C5: (179.609,-58.978,-131.257)
C4: (180.484,-58.174,-131.953)
P: (177.616,-58.888,-138.516)
C4': (180.810,-58.631,-136.613)
C2': (182.260,-58.609,-134.742)
O2': (183.235,-57.637,-135.093)
N1: (180.509,-58.022,-129.370)
N2: (182.160,-56.483,-129.433)
N3: (181.392,-57.303,-131.493)
N7: (178.825,-59.737,-132.110)
N9: (180.252,-58.458,-133.255)
O5': (179.123,-58.548,-138.271)
O3': (182.917,-59.635,-136.865)
Image (generated by PyMOL):
PyMOL image
show in jmol