Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1456:1523
Extra
PDB:
ATOM 1 O3' G A 455 83.760 -3.834 -1.792 1.00 54.23 O
ATOM 2 P U A 456 82.994 -4.867 -2.762 1.00 52.12 P
ATOM 3 OP1 U A 456 82.762 -4.153 -4.068 1.00 52.61 O
ATOM 4 OP2 U A 456 81.818 -5.380 -1.993 1.00 51.67 O
ATOM 5 O5' U A 456 84.064 -6.040 -2.970 1.00 52.37 O
ATOM 6 C5' U A 456 85.264 -5.805 -3.685 1.00 52.82 C
ATOM 7 C4' U A 456 86.306 -6.852 -3.391 1.00 52.88 C
ATOM 8 O4' U A 456 86.484 -7.008 -1.948 1.00 52.33 O
ATOM 9 C3' U A 456 86.003 -8.262 -3.862 1.00 53.07 C
ATOM 10 O3' U A 456 86.216 -8.440 -5.240 1.00 53.67 O
ATOM 11 C2' U A 456 86.948 -9.080 -3.003 1.00 52.90 C
ATOM 12 O2' U A 456 88.285 -8.955 -3.473 1.00 53.28 O
ATOM 13 C1' U A 456 86.835 -8.349 -1.666 1.00 52.32 C
ATOM 14 N1 U A 456 85.793 -8.936 -0.828 1.00 51.86 N
ATOM 15 C2 U A 456 86.089 -10.154 -0.252 1.00 51.74 C
ATOM 16 O2 U A 456 87.145 -10.704 -0.425 1.00 51.99 O
ATOM 17 N3 U A 456 85.108 -10.705 0.547 1.00 51.31 N
ATOM 18 C4 U A 456 83.874 -10.142 0.787 1.00 51.02 C
ATOM 19 O4 U A 456 83.097 -10.742 1.526 1.00 50.66 O
ATOM 20 C5 U A 456 83.644 -8.869 0.144 1.00 51.18 C
ATOM 21 C6 U A 456 84.572 -8.321 -0.640 1.00 51.59 C
ATOM 22 P G A 457 85.513 -9.664 -6.031 1.00 61.66 P
ATOM 23 OP1 G A 457 85.701 -9.386 -7.489 1.00 62.29 O
ATOM 24 OP2 G A 457 84.107 -9.805 -5.499 1.00 61.25 O
ATOM 25 O5' G A 457 86.404 -10.926 -5.604 1.00 61.67 O
TER
ATOM 1 O3' A B 522 91.541 -22.935 5.015 1.00 49.14 O
ATOM 2 P G B 523 91.034 -22.348 3.631 1.00 49.92 P
ATOM 3 OP1 G B 523 90.113 -23.335 3.064 1.00 50.09 O
ATOM 4 OP2 G B 523 92.276 -21.973 2.851 1.00 50.38 O
ATOM 5 O5' G B 523 90.239 -21.049 4.106 1.00 49.45 O
ATOM 6 C5' G B 523 89.481 -20.276 3.234 1.00 49.55 C
ATOM 7 C4' G B 523 90.317 -19.399 2.361 1.00 49.91 C
ATOM 8 O4' G B 523 89.496 -18.980 1.260 1.00 50.14 O
ATOM 9 C3' G B 523 90.810 -18.092 2.959 1.00 49.65 C
ATOM 10 O3' G B 523 92.019 -18.245 3.686 1.00 49.62 O
ATOM 11 C2' G B 523 90.972 -17.225 1.728 1.00 50.05 C
ATOM 12 O2' G B 523 92.118 -17.615 1.029 1.00 50.55 O
ATOM 13 C1' G B 523 89.784 -17.657 0.899 1.00 50.19 C
ATOM 14 N9 G B 523 88.596 -16.833 1.158 1.00 49.82 N
ATOM 15 C8 G B 523 87.489 -17.197 1.874 1.00 49.40 C
ATOM 16 N7 G B 523 86.635 -16.222 1.951 1.00 49.15 N
ATOM 17 C5 G B 523 87.201 -15.194 1.226 1.00 49.43 C
ATOM 18 C6 G B 523 86.735 -13.908 0.954 1.00 49.36 C
ATOM 19 O6 G B 523 85.697 -13.366 1.302 1.00 49.04 O
ATOM 20 N1 G B 523 87.587 -13.163 0.196 1.00 49.73 N
ATOM 21 C2 G B 523 88.793 -13.576 -0.268 1.00 50.13 C
ATOM 22 N2 G B 523 89.443 -12.636 -1.006 1.00 50.46 N
ATOM 23 N3 G B 523 89.265 -14.808 -0.023 1.00 50.21 N
ATOM 24 C4 G B 523 88.413 -15.547 0.727 1.00 49.84 C
ATOM 25 P C B 524 92.614 -17.063 4.637 1.00 49.94 P
ATOM 26 OP1 C B 524 93.950 -17.498 5.026 1.00 50.10 O
ATOM 27 OP2 C B 524 91.623 -16.791 5.729 1.00 49.36 O
ATOM 28 O5' C B 524 92.716 -15.807 3.660 1.00 50.20 O
TER
ATOM 2 P U A 456 82.994 -4.867 -2.762 1.00 52.12 P
ATOM 3 OP1 U A 456 82.762 -4.153 -4.068 1.00 52.61 O
ATOM 4 OP2 U A 456 81.818 -5.380 -1.993 1.00 51.67 O
ATOM 5 O5' U A 456 84.064 -6.040 -2.970 1.00 52.37 O
ATOM 6 C5' U A 456 85.264 -5.805 -3.685 1.00 52.82 C
ATOM 7 C4' U A 456 86.306 -6.852 -3.391 1.00 52.88 C
ATOM 8 O4' U A 456 86.484 -7.008 -1.948 1.00 52.33 O
ATOM 9 C3' U A 456 86.003 -8.262 -3.862 1.00 53.07 C
ATOM 10 O3' U A 456 86.216 -8.440 -5.240 1.00 53.67 O
ATOM 11 C2' U A 456 86.948 -9.080 -3.003 1.00 52.90 C
ATOM 12 O2' U A 456 88.285 -8.955 -3.473 1.00 53.28 O
ATOM 13 C1' U A 456 86.835 -8.349 -1.666 1.00 52.32 C
ATOM 14 N1 U A 456 85.793 -8.936 -0.828 1.00 51.86 N
ATOM 15 C2 U A 456 86.089 -10.154 -0.252 1.00 51.74 C
ATOM 16 O2 U A 456 87.145 -10.704 -0.425 1.00 51.99 O
ATOM 17 N3 U A 456 85.108 -10.705 0.547 1.00 51.31 N
ATOM 18 C4 U A 456 83.874 -10.142 0.787 1.00 51.02 C
ATOM 19 O4 U A 456 83.097 -10.742 1.526 1.00 50.66 O
ATOM 20 C5 U A 456 83.644 -8.869 0.144 1.00 51.18 C
ATOM 21 C6 U A 456 84.572 -8.321 -0.640 1.00 51.59 C
ATOM 22 P G A 457 85.513 -9.664 -6.031 1.00 61.66 P
ATOM 23 OP1 G A 457 85.701 -9.386 -7.489 1.00 62.29 O
ATOM 24 OP2 G A 457 84.107 -9.805 -5.499 1.00 61.25 O
ATOM 25 O5' G A 457 86.404 -10.926 -5.604 1.00 61.67 O
TER
ATOM 1 O3' A B 522 91.541 -22.935 5.015 1.00 49.14 O
ATOM 2 P G B 523 91.034 -22.348 3.631 1.00 49.92 P
ATOM 3 OP1 G B 523 90.113 -23.335 3.064 1.00 50.09 O
ATOM 4 OP2 G B 523 92.276 -21.973 2.851 1.00 50.38 O
ATOM 5 O5' G B 523 90.239 -21.049 4.106 1.00 49.45 O
ATOM 6 C5' G B 523 89.481 -20.276 3.234 1.00 49.55 C
ATOM 7 C4' G B 523 90.317 -19.399 2.361 1.00 49.91 C
ATOM 8 O4' G B 523 89.496 -18.980 1.260 1.00 50.14 O
ATOM 9 C3' G B 523 90.810 -18.092 2.959 1.00 49.65 C
ATOM 10 O3' G B 523 92.019 -18.245 3.686 1.00 49.62 O
ATOM 11 C2' G B 523 90.972 -17.225 1.728 1.00 50.05 C
ATOM 12 O2' G B 523 92.118 -17.615 1.029 1.00 50.55 O
ATOM 13 C1' G B 523 89.784 -17.657 0.899 1.00 50.19 C
ATOM 14 N9 G B 523 88.596 -16.833 1.158 1.00 49.82 N
ATOM 15 C8 G B 523 87.489 -17.197 1.874 1.00 49.40 C
ATOM 16 N7 G B 523 86.635 -16.222 1.951 1.00 49.15 N
ATOM 17 C5 G B 523 87.201 -15.194 1.226 1.00 49.43 C
ATOM 18 C6 G B 523 86.735 -13.908 0.954 1.00 49.36 C
ATOM 19 O6 G B 523 85.697 -13.366 1.302 1.00 49.04 O
ATOM 20 N1 G B 523 87.587 -13.163 0.196 1.00 49.73 N
ATOM 21 C2 G B 523 88.793 -13.576 -0.268 1.00 50.13 C
ATOM 22 N2 G B 523 89.443 -12.636 -1.006 1.00 50.46 N
ATOM 23 N3 G B 523 89.265 -14.808 -0.023 1.00 50.21 N
ATOM 24 C4 G B 523 88.413 -15.547 0.727 1.00 49.84 C
ATOM 25 P C B 524 92.614 -17.063 4.637 1.00 49.94 P
ATOM 26 OP1 C B 524 93.950 -17.498 5.026 1.00 50.10 O
ATOM 27 OP2 C B 524 91.623 -16.791 5.729 1.00 49.36 O
ATOM 28 O5' C B 524 92.716 -15.807 3.660 1.00 50.20 O
TER
Atoms:
C4: (83.874,-10.142,0.787)
N3: (85.108,-10.705,0.547)
OP1: (82.762,-4.153,-4.068)
OP2: (81.818,-5.380,-1.993)
C2: (86.089,-10.154,-0.252)
C1': (86.835,-8.349,-1.666)
C3': (86.003,-8.262,-3.862)
O5': (84.064,-6.040,-2.970)
O4': (86.484,-7.008,-1.948)
C5': (85.264,-5.805,-3.685)
P: (82.994,-4.867,-2.762)
C4': (86.306,-6.852,-3.391)
C2': (86.948,-9.080,-3.003)
O2': (88.285,-8.955,-3.473)
N1: (85.793,-8.936,-0.828)
O4: (83.097,-10.742,1.526)
O2: (87.145,-10.704,-0.425)
C6: (84.572,-8.321,-0.640)
C5: (83.644,-8.869,0.144)
O3': (86.216,-8.440,-5.240)
N3: (85.108,-10.705,0.547)
OP1: (82.762,-4.153,-4.068)
OP2: (81.818,-5.380,-1.993)
C2: (86.089,-10.154,-0.252)
C1': (86.835,-8.349,-1.666)
C3': (86.003,-8.262,-3.862)
O5': (84.064,-6.040,-2.970)
O4': (86.484,-7.008,-1.948)
C5': (85.264,-5.805,-3.685)
P: (82.994,-4.867,-2.762)
C4': (86.306,-6.852,-3.391)
C2': (86.948,-9.080,-3.003)
O2': (88.285,-8.955,-3.473)
N1: (85.793,-8.936,-0.828)
O4: (83.097,-10.742,1.526)
O2: (87.145,-10.704,-0.425)
C6: (84.572,-8.321,-0.640)
C5: (83.644,-8.869,0.144)
O3': (86.216,-8.440,-5.240)
OP1: (90.113,-23.335,3.064)
OP2: (92.276,-21.973,2.851)
C3': (90.810,-18.092,2.959)
C1': (89.784,-17.657,0.899)
C5': (89.481,-20.276,3.234)
O6: (85.697,-13.366,1.302)
O4': (89.496,-18.980,1.260)
C8: (87.489,-17.197,1.874)
C2: (88.793,-13.576,-0.268)
C6: (86.735,-13.908,0.954)
C5: (87.201,-15.194,1.226)
C4: (88.413,-15.547,0.727)
P: (91.034,-22.348,3.631)
C4': (90.317,-19.399,2.361)
C2': (90.972,-17.225,1.728)
O2': (92.118,-17.615,1.029)
N1: (87.587,-13.163,0.196)
N2: (89.443,-12.636,-1.006)
N3: (89.265,-14.808,-0.023)
N7: (86.635,-16.222,1.951)
N9: (88.596,-16.833,1.158)
O5': (90.239,-21.049,4.106)
O3': (92.019,-18.245,3.686)
OP2: (92.276,-21.973,2.851)
C3': (90.810,-18.092,2.959)
C1': (89.784,-17.657,0.899)
C5': (89.481,-20.276,3.234)
O6: (85.697,-13.366,1.302)
O4': (89.496,-18.980,1.260)
C8: (87.489,-17.197,1.874)
C2: (88.793,-13.576,-0.268)
C6: (86.735,-13.908,0.954)
C5: (87.201,-15.194,1.226)
C4: (88.413,-15.547,0.727)
P: (91.034,-22.348,3.631)
C4': (90.317,-19.399,2.361)
C2': (90.972,-17.225,1.728)
O2': (92.118,-17.615,1.029)
N1: (87.587,-13.163,0.196)
N2: (89.443,-12.636,-1.006)
N3: (89.265,-14.808,-0.023)
N7: (86.635,-16.222,1.951)
N9: (88.596,-16.833,1.158)
O5': (90.239,-21.049,4.106)
O3': (92.019,-18.245,3.686)
Image (generated by PyMOL):