ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHZ:A563:A552

Extra

PDB:
ATOM 1 O3' G A 562 76.105-109.145 -11.604 1.00 39.22 O
ATOM 2 P U A 563 76.938-108.111 -10.707 1.00 28.50 P
ATOM 3 OP1 U A 563 76.361-106.776 -10.916 1.00 37.80 O
ATOM 4 OP2 U A 563 78.384-108.320 -11.013 1.00 74.02 O
ATOM 5 O5' U A 563 76.647-108.603 -9.250 1.00 40.82 O
ATOM 6 C5' U A 563 75.549-108.124 -8.525 1.00 43.20 C
ATOM 7 C4' U A 563 75.585-108.679 -7.144 1.00 51.81 C
ATOM 8 O4' U A 563 75.937-110.073 -7.217 1.00 59.56 O
ATOM 9 C3' U A 563 76.628-108.068 -6.224 1.00 47.85 C
ATOM 10 O3' U A 563 76.139-106.909 -5.586 1.00 45.15 O
ATOM 11 C2' U A 563 76.957-109.195 -5.254 1.00 46.76 C
ATOM 12 O2' U A 563 76.076-109.161 -4.151 1.00 49.69 O
ATOM 13 C1' U A 563 76.650-110.453 -6.076 1.00 55.81 C
ATOM 14 N1 U A 563 77.847-111.175 -6.500 1.00 51.06 N
ATOM 15 C2 U A 563 78.435-111.976 -5.585 1.00 54.45 C
ATOM 16 O2 U A 563 78.010-112.052 -4.459 1.00 55.68 O
ATOM 17 N3 U A 563 79.538-112.649 -6.022 1.00 65.24 N
ATOM 18 C4 U A 563 80.107-112.614 -7.279 1.00 68.93 C
ATOM 19 O4 U A 563 81.123-113.273 -7.547 1.00 80.44 O
ATOM 20 C5 U A 563 79.400-111.772 -8.177 1.00 62.36 C
ATOM 21 C6 U A 563 78.316-111.107 -7.772 1.00 59.98 C
ATOM 22 P U A 564 77.097-105.680 -5.285 1.00 38.40 P
ATOM 23 OP1 U A 564 76.264-104.563 -4.803 1.00 68.56 O
ATOM 24 OP2 U A 564 77.946-105.466 -6.491 1.00 65.88 O
ATOM 25 O5' U A 564 77.956-106.247 -4.094 1.00 60.66 O
TER

ATOM 1 O3' G B 551 86.016-119.285 0.658 1.00 60.18 O
ATOM 2 P G B 552 84.882-120.185 -0.031 1.00 65.46 P
ATOM 3 OP1 G B 552 84.953-121.529 0.599 1.00 86.85 O
ATOM 4 OP2 G B 552 85.057-120.072 -1.492 1.00 89.41 O
ATOM 5 O5' G B 552 83.552-119.449 0.408 1.00 62.54 O
ATOM 6 C5' G B 552 83.142-119.456 1.763 1.00 61.95 C
ATOM 7 C4' G B 552 81.976-118.529 2.000 1.00 65.49 C
ATOM 8 O4' G B 552 82.325-117.195 1.586 1.00 63.68 O
ATOM 9 C3' G B 552 80.708-118.810 1.213 1.00 62.83 C
ATOM 10 O3' G B 552 79.949-119.877 1.741 1.00 58.22 O
ATOM 11 C2' G B 552 80.002-117.477 1.288 1.00 52.23 C
ATOM 12 O2' G B 552 79.486-117.281 2.581 1.00 56.75 O
ATOM 13 C1' G B 552 81.168-116.528 1.130 1.00 55.59 C
ATOM 14 N9 G B 552 81.376-116.114 -0.263 1.00 47.39 N
ATOM 15 C8 G B 552 82.490-116.375 -0.997 1.00 62.53 C
ATOM 16 N7 G B 552 82.441-115.859 -2.186 1.00 67.50 N
ATOM 17 C5 G B 552 81.231-115.193 -2.211 1.00 60.39 C
ATOM 18 C6 G B 552 80.644-114.444 -3.252 1.00 67.60 C
ATOM 19 O6 G B 552 81.113-114.234 -4.379 1.00 73.01 O
ATOM 20 N1 G B 552 79.406-113.936 -2.880 1.00 62.73 N
ATOM 21 C2 G B 552 78.813-114.129 -1.667 1.00 58.30 C
ATOM 22 N2 G B 552 77.603-113.571 -1.508 1.00 49.53 N
ATOM 23 N3 G B 552 79.371-114.826 -0.693 1.00 61.22 N
ATOM 24 C4 G B 552 80.570-115.326 -1.029 1.00 47.80 C
ATOM 25 P C B 553 79.441-121.038 0.772 1.00 58.84 P
ATOM 26 OP1 C B 553 79.210-122.226 1.616 1.00 85.26 O
ATOM 27 OP2 C B 553 80.402-121.128 -0.352 1.00 60.67 O
ATOM 28 O5' C B 553 78.056-120.468 0.254 1.00 71.75 O
TER

Atoms:
C4: (80.107,-112.614,-7.279)
N3: (79.538,-112.649,-6.022)
OP1: (76.361,-106.776,-10.916)
OP2: (78.384,-108.320,-11.013)
C2: (78.435,-111.976,-5.585)
C1': (76.650,-110.453,-6.076)
C3': (76.628,-108.068,-6.224)
O5': (76.647,-108.603,-9.250)
O4': (75.937,-110.073,-7.217)
C5': (75.549,-108.124,-8.525)
P: (76.938,-108.111,-10.707)
C4': (75.585,-108.679,-7.144)
C2': (76.957,-109.195,-5.254)
O2': (76.076,-109.161,-4.151)
N1: (77.847,-111.175,-6.500)
O4: (81.123,-113.273,-7.547)
O2: (78.010,-112.052,-4.459)
C6: (78.316,-111.107,-7.772)
C5: (79.400,-111.772,-8.177)
O3': (76.139,-106.909,-5.586)
OP1: (84.953,-121.529,0.599)
OP2: (85.057,-120.072,-1.492)
C3': (80.708,-118.810,1.213)
C1': (81.168,-116.528,1.130)
C5': (83.142,-119.456,1.763)
O6: (81.113,-114.234,-4.379)
O4': (82.325,-117.195,1.586)
C8: (82.490,-116.375,-0.997)
C2: (78.813,-114.129,-1.667)
C6: (80.644,-114.444,-3.252)
C5: (81.231,-115.193,-2.211)
C4: (80.570,-115.326,-1.029)
P: (84.882,-120.185,-0.031)
C4': (81.976,-118.529,2.000)
C2': (80.002,-117.477,1.288)
O2': (79.486,-117.281,2.581)
N1: (79.406,-113.936,-2.880)
N2: (77.603,-113.571,-1.508)
N3: (79.371,-114.826,-0.693)
N7: (82.441,-115.859,-2.186)
N9: (81.376,-116.114,-0.263)
O5': (83.552,-119.449,0.408)
O3': (79.949,-119.877,1.741)
Image (generated by PyMOL):
PyMOL image
show in jmol