ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJ9:981:999

Extra

PDB:
ATOM 1 O3' C A 80 47.976 73.142 114.955 1.00 45.31 O
ATOM 2 P U A 81 47.067 74.411 114.608 1.00 46.04 P
ATOM 3 OP1 U A 81 47.933 75.420 113.958 1.00 48.32 O
ATOM 4 OP2 U A 81 46.314 74.777 115.830 1.00 48.13 O
ATOM 5 O5' U A 81 46.025 73.860 113.542 1.00 44.59 O
ATOM 6 C5' U A 81 46.459 73.167 112.364 1.00 45.71 C
ATOM 7 C4' U A 81 45.276 72.548 111.663 1.00 46.95 C
ATOM 8 O4' U A 81 44.647 71.570 112.534 1.00 46.53 O
ATOM 9 C3' U A 81 44.157 73.521 111.325 1.00 47.36 C
ATOM 10 O3' U A 81 44.457 74.214 110.114 1.00 49.25 O
ATOM 11 C2' U A 81 42.944 72.606 111.218 1.00 46.74 C
ATOM 12 O2' U A 81 42.849 71.971 109.967 1.00 48.37 O
ATOM 13 C1' U A 81 43.248 71.558 112.294 1.00 47.23 C
ATOM 14 N1 U A 81 42.536 71.782 113.561 1.00 47.59 N
ATOM 15 C2 U A 81 41.222 71.350 113.641 1.00 48.63 C
ATOM 16 O2 U A 81 40.656 70.776 112.726 1.00 49.37 O
ATOM 17 N3 U A 81 40.594 71.613 114.835 1.00 49.20 N
ATOM 18 C4 U A 81 41.135 72.245 115.937 1.00 49.61 C
ATOM 19 O4 U A 81 40.436 72.436 116.933 1.00 48.71 O
ATOM 20 C5 U A 81 42.501 72.646 115.781 1.00 50.17 C
ATOM 21 C6 U A 81 43.139 72.405 114.628 1.00 49.38 C
ATOM 22 P G A 82 43.482 75.375 109.579 1.00 50.37 P
ATOM 23 OP1 G A 82 44.294 76.172 108.633 1.00 52.36 O
ATOM 24 OP2 G A 82 42.823 76.052 110.718 1.00 49.71 O
ATOM 25 O5' G A 82 42.373 74.592 108.747 1.00 48.18 O
TER

ATOM 1 O3' U B 98 28.524 71.157 113.586 1.00 56.75 O
ATOM 2 P G B 99 28.921 69.613 113.790 1.00 59.46 P
ATOM 3 OP1 G B 99 27.687 68.832 113.477 1.00 58.33 O
ATOM 4 OP2 G B 99 29.576 69.440 115.117 1.00 58.57 O
ATOM 5 O5' G B 99 30.028 69.363 112.669 1.00 55.81 O
ATOM 6 C5' G B 99 29.714 69.518 111.272 1.00 53.82 C
ATOM 7 C4' G B 99 30.947 69.311 110.418 1.00 51.77 C
ATOM 8 O4' G B 99 31.839 70.452 110.507 1.00 50.27 O
ATOM 9 C3' G B 99 31.838 68.147 110.802 1.00 50.46 C
ATOM 10 O3' G B 99 31.350 66.893 110.389 1.00 49.09 O
ATOM 11 C2' G B 99 33.137 68.503 110.106 1.00 50.62 C
ATOM 12 O2' G B 99 33.126 68.217 108.723 1.00 50.35 O
ATOM 13 C1' G B 99 33.181 70.010 110.344 1.00 51.59 C
ATOM 14 N9 G B 99 33.936 70.299 111.560 1.00 53.07 N
ATOM 15 C8 G B 99 33.449 70.548 112.822 1.00 52.77 C
ATOM 16 N7 G B 99 34.391 70.752 113.703 1.00 52.58 N
ATOM 17 C5 G B 99 35.569 70.634 112.980 1.00 53.54 C
ATOM 18 C6 G B 99 36.917 70.763 113.392 1.00 54.43 C
ATOM 19 O6 G B 99 37.358 71.010 114.523 1.00 54.90 O
ATOM 20 N1 G B 99 37.795 70.581 112.326 1.00 54.17 N
ATOM 21 C2 G B 99 37.424 70.316 111.031 1.00 52.47 C
ATOM 22 N2 G B 99 38.413 70.214 110.139 1.00 52.39 N
ATOM 23 N3 G B 99 36.176 70.178 110.639 1.00 52.67 N
ATOM 24 C4 G B 99 35.305 70.355 111.656 1.00 53.34 C
ATOM 25 P G B 100 31.977 65.566 111.024 1.00 51.16 P
ATOM 26 OP1 G B 100 31.278 64.435 110.361 1.00 51.12 O
ATOM 27 OP2 G B 100 31.973 65.681 112.514 1.00 48.86 O
ATOM 28 O5' G B 100 33.494 65.581 110.531 1.00 50.99 O
TER

Atoms:
C4: (41.135,72.245,115.937)
N3: (40.594,71.613,114.835)
OP1: (47.933,75.420,113.958)
OP2: (46.314,74.777,115.830)
C2: (41.222,71.350,113.641)
C1': (43.248,71.558,112.294)
C3': (44.157,73.521,111.325)
O5': (46.025,73.860,113.542)
O4': (44.647,71.570,112.534)
C5': (46.459,73.167,112.364)
P: (47.067,74.411,114.608)
C4': (45.276,72.548,111.663)
C2': (42.944,72.606,111.218)
O2': (42.849,71.971,109.967)
N1: (42.536,71.782,113.561)
O4: (40.436,72.436,116.933)
O2: (40.656,70.776,112.726)
C6: (43.139,72.405,114.628)
C5: (42.501,72.646,115.781)
O3': (44.457,74.214,110.114)
OP1: (27.687,68.832,113.477)
OP2: (29.576,69.440,115.117)
C3': (31.838,68.147,110.802)
C1': (33.181,70.010,110.344)
C5': (29.714,69.518,111.272)
O6: (37.358,71.010,114.523)
O4': (31.839,70.452,110.507)
C8: (33.449,70.548,112.822)
C2: (37.424,70.316,111.031)
C6: (36.917,70.763,113.392)
C5: (35.569,70.634,112.980)
C4: (35.305,70.355,111.656)
P: (28.921,69.613,113.790)
C4': (30.947,69.311,110.418)
C2': (33.137,68.503,110.106)
O2': (33.126,68.217,108.723)
N1: (37.795,70.581,112.326)
N2: (38.413,70.214,110.139)
N3: (36.176,70.178,110.639)
N7: (34.391,70.752,113.703)
N9: (33.936,70.299,111.560)
O5': (30.028,69.363,112.669)
O3': (31.350,66.893,110.389)
Image (generated by PyMOL):
PyMOL image
show in jmol