Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12614:12580
Extra
PDB:
ATOM 1 O3' U A2613 15.142 2.437 47.487 1.00 46.34 O
ATOM 2 P U A2614 16.075 1.785 48.634 1.00 47.75 P
ATOM 3 OP1 U A2614 15.609 2.362 49.923 1.00 47.70 O
ATOM 4 OP2 U A2614 17.504 1.991 48.252 1.00 47.62 O
ATOM 5 O5' U A2614 15.722 0.229 48.551 1.00 47.71 O
ATOM 6 C5' U A2614 14.410 -0.255 48.677 1.00 47.85 C
ATOM 7 C4' U A2614 14.311 -1.653 48.126 1.00 47.86 C
ATOM 8 O4' U A2614 14.568 -1.641 46.709 1.00 48.01 O
ATOM 9 C3' U A2614 15.317 -2.621 48.650 1.00 47.61 C
ATOM 10 O3' U A2614 14.953 -3.149 49.876 1.00 47.49 O
ATOM 11 C2' U A2614 15.417 -3.669 47.560 1.00 47.69 C
ATOM 12 O2' U A2614 14.370 -4.618 47.669 1.00 47.80 O
ATOM 13 C1' U A2614 15.186 -2.843 46.317 1.00 47.92 C
ATOM 14 N1 U A2614 16.445 -2.530 45.597 1.00 47.86 N
ATOM 15 C2 U A2614 17.008 -3.514 44.792 1.00 47.87 C
ATOM 16 O2 U A2614 16.552 -4.638 44.685 1.00 47.91 O
ATOM 17 N3 U A2614 18.140 -3.189 44.116 1.00 47.83 N
ATOM 18 C4 U A2614 18.757 -1.993 44.163 1.00 47.79 C
ATOM 19 O4 U A2614 19.755 -1.825 43.499 1.00 47.77 O
ATOM 20 C5 U A2614 18.123 -1.026 45.002 1.00 47.79 C
ATOM 21 C6 U A2614 17.005 -1.296 45.676 1.00 47.83 C
ATOM 22 P G A2615 16.031 -4.001 50.702 1.00 49.37 P
ATOM 23 OP1 G A2615 15.521 -4.059 52.111 1.00 49.29 O
ATOM 24 OP2 G A2615 17.408 -3.401 50.426 1.00 49.24 O
ATOM 25 O5' G A2615 15.918 -5.420 50.030 1.00 49.42 O
TER
ATOM 1 O3' U B2579 19.462 -6.125 35.965 1.00 47.71 O
ATOM 2 P G B2580 18.597 -6.979 34.883 1.00 40.57 P
ATOM 3 OP1 G B2580 19.541 -7.805 34.055 1.00 40.61 O
ATOM 4 OP2 G B2580 17.728 -6.009 34.188 1.00 40.84 O
ATOM 5 O5' G B2580 17.727 -7.932 35.806 1.00 40.49 O
ATOM 6 C5' G B2580 17.686 -9.334 35.599 1.00 40.54 C
ATOM 7 C4' G B2580 16.996 -10.017 36.752 1.00 40.40 C
ATOM 8 O4' G B2580 17.900 -10.102 37.906 1.00 40.05 O
ATOM 9 C3' G B2580 15.743 -9.306 37.274 1.00 40.47 C
ATOM 10 O3' G B2580 14.581 -9.697 36.544 1.00 40.79 O
ATOM 11 C2' G B2580 15.688 -9.739 38.720 1.00 40.20 C
ATOM 12 O2' G B2580 15.075 -11.016 38.792 1.00 40.28 O
ATOM 13 C1' G B2580 17.185 -9.871 39.098 1.00 39.92 C
ATOM 14 N9 G B2580 17.720 -8.627 39.716 1.00 39.73 N
ATOM 15 C8 G B2580 18.740 -7.867 39.181 1.00 39.70 C
ATOM 16 N7 G B2580 19.014 -6.800 39.864 1.00 39.55 N
ATOM 17 C5 G B2580 18.141 -6.850 40.924 1.00 39.47 C
ATOM 18 C6 G B2580 17.966 -5.968 41.993 1.00 39.33 C
ATOM 19 O6 G B2580 18.543 -4.947 42.295 1.00 39.22 O
ATOM 20 N1 G B2580 16.988 -6.339 42.852 1.00 39.31 N
ATOM 21 C2 G B2580 16.208 -7.449 42.754 1.00 39.42 C
ATOM 22 N2 G B2580 15.285 -7.595 43.752 1.00 39.39 N
ATOM 23 N3 G B2580 16.360 -8.306 41.737 1.00 39.56 N
ATOM 24 C4 G B2580 17.331 -7.947 40.860 1.00 39.58 C
ATOM 25 P U B2581 13.280 -8.760 36.459 1.00 40.08 P
ATOM 26 OP1 U B2581 12.160 -9.640 36.149 1.00 40.32 O
ATOM 27 OP2 U B2581 13.633 -7.633 35.522 1.00 40.22 O
ATOM 28 O5' U B2581 13.137 -8.192 37.937 1.00 39.81 O
TER
ATOM 2 P U A2614 16.075 1.785 48.634 1.00 47.75 P
ATOM 3 OP1 U A2614 15.609 2.362 49.923 1.00 47.70 O
ATOM 4 OP2 U A2614 17.504 1.991 48.252 1.00 47.62 O
ATOM 5 O5' U A2614 15.722 0.229 48.551 1.00 47.71 O
ATOM 6 C5' U A2614 14.410 -0.255 48.677 1.00 47.85 C
ATOM 7 C4' U A2614 14.311 -1.653 48.126 1.00 47.86 C
ATOM 8 O4' U A2614 14.568 -1.641 46.709 1.00 48.01 O
ATOM 9 C3' U A2614 15.317 -2.621 48.650 1.00 47.61 C
ATOM 10 O3' U A2614 14.953 -3.149 49.876 1.00 47.49 O
ATOM 11 C2' U A2614 15.417 -3.669 47.560 1.00 47.69 C
ATOM 12 O2' U A2614 14.370 -4.618 47.669 1.00 47.80 O
ATOM 13 C1' U A2614 15.186 -2.843 46.317 1.00 47.92 C
ATOM 14 N1 U A2614 16.445 -2.530 45.597 1.00 47.86 N
ATOM 15 C2 U A2614 17.008 -3.514 44.792 1.00 47.87 C
ATOM 16 O2 U A2614 16.552 -4.638 44.685 1.00 47.91 O
ATOM 17 N3 U A2614 18.140 -3.189 44.116 1.00 47.83 N
ATOM 18 C4 U A2614 18.757 -1.993 44.163 1.00 47.79 C
ATOM 19 O4 U A2614 19.755 -1.825 43.499 1.00 47.77 O
ATOM 20 C5 U A2614 18.123 -1.026 45.002 1.00 47.79 C
ATOM 21 C6 U A2614 17.005 -1.296 45.676 1.00 47.83 C
ATOM 22 P G A2615 16.031 -4.001 50.702 1.00 49.37 P
ATOM 23 OP1 G A2615 15.521 -4.059 52.111 1.00 49.29 O
ATOM 24 OP2 G A2615 17.408 -3.401 50.426 1.00 49.24 O
ATOM 25 O5' G A2615 15.918 -5.420 50.030 1.00 49.42 O
TER
ATOM 1 O3' U B2579 19.462 -6.125 35.965 1.00 47.71 O
ATOM 2 P G B2580 18.597 -6.979 34.883 1.00 40.57 P
ATOM 3 OP1 G B2580 19.541 -7.805 34.055 1.00 40.61 O
ATOM 4 OP2 G B2580 17.728 -6.009 34.188 1.00 40.84 O
ATOM 5 O5' G B2580 17.727 -7.932 35.806 1.00 40.49 O
ATOM 6 C5' G B2580 17.686 -9.334 35.599 1.00 40.54 C
ATOM 7 C4' G B2580 16.996 -10.017 36.752 1.00 40.40 C
ATOM 8 O4' G B2580 17.900 -10.102 37.906 1.00 40.05 O
ATOM 9 C3' G B2580 15.743 -9.306 37.274 1.00 40.47 C
ATOM 10 O3' G B2580 14.581 -9.697 36.544 1.00 40.79 O
ATOM 11 C2' G B2580 15.688 -9.739 38.720 1.00 40.20 C
ATOM 12 O2' G B2580 15.075 -11.016 38.792 1.00 40.28 O
ATOM 13 C1' G B2580 17.185 -9.871 39.098 1.00 39.92 C
ATOM 14 N9 G B2580 17.720 -8.627 39.716 1.00 39.73 N
ATOM 15 C8 G B2580 18.740 -7.867 39.181 1.00 39.70 C
ATOM 16 N7 G B2580 19.014 -6.800 39.864 1.00 39.55 N
ATOM 17 C5 G B2580 18.141 -6.850 40.924 1.00 39.47 C
ATOM 18 C6 G B2580 17.966 -5.968 41.993 1.00 39.33 C
ATOM 19 O6 G B2580 18.543 -4.947 42.295 1.00 39.22 O
ATOM 20 N1 G B2580 16.988 -6.339 42.852 1.00 39.31 N
ATOM 21 C2 G B2580 16.208 -7.449 42.754 1.00 39.42 C
ATOM 22 N2 G B2580 15.285 -7.595 43.752 1.00 39.39 N
ATOM 23 N3 G B2580 16.360 -8.306 41.737 1.00 39.56 N
ATOM 24 C4 G B2580 17.331 -7.947 40.860 1.00 39.58 C
ATOM 25 P U B2581 13.280 -8.760 36.459 1.00 40.08 P
ATOM 26 OP1 U B2581 12.160 -9.640 36.149 1.00 40.32 O
ATOM 27 OP2 U B2581 13.633 -7.633 35.522 1.00 40.22 O
ATOM 28 O5' U B2581 13.137 -8.192 37.937 1.00 39.81 O
TER
Atoms:
C4: (18.757,-1.993,44.163)
N3: (18.140,-3.189,44.116)
OP1: (15.609,2.362,49.923)
OP2: (17.504,1.991,48.252)
C2: (17.008,-3.514,44.792)
C1': (15.186,-2.843,46.317)
C3': (15.317,-2.621,48.650)
O5': (15.722,0.229,48.551)
O4': (14.568,-1.641,46.709)
C5': (14.410,-0.255,48.677)
P: (16.075,1.785,48.634)
C4': (14.311,-1.653,48.126)
C2': (15.417,-3.669,47.560)
O2': (14.370,-4.618,47.669)
N1: (16.445,-2.530,45.597)
O4: (19.755,-1.825,43.499)
O2: (16.552,-4.638,44.685)
C6: (17.005,-1.296,45.676)
C5: (18.123,-1.026,45.002)
O3': (14.953,-3.149,49.876)
N3: (18.140,-3.189,44.116)
OP1: (15.609,2.362,49.923)
OP2: (17.504,1.991,48.252)
C2: (17.008,-3.514,44.792)
C1': (15.186,-2.843,46.317)
C3': (15.317,-2.621,48.650)
O5': (15.722,0.229,48.551)
O4': (14.568,-1.641,46.709)
C5': (14.410,-0.255,48.677)
P: (16.075,1.785,48.634)
C4': (14.311,-1.653,48.126)
C2': (15.417,-3.669,47.560)
O2': (14.370,-4.618,47.669)
N1: (16.445,-2.530,45.597)
O4: (19.755,-1.825,43.499)
O2: (16.552,-4.638,44.685)
C6: (17.005,-1.296,45.676)
C5: (18.123,-1.026,45.002)
O3': (14.953,-3.149,49.876)
OP1: (19.541,-7.805,34.055)
OP2: (17.728,-6.009,34.188)
C3': (15.743,-9.306,37.274)
C1': (17.185,-9.871,39.098)
C5': (17.686,-9.334,35.599)
O6: (18.543,-4.947,42.295)
O4': (17.900,-10.102,37.906)
C8: (18.740,-7.867,39.181)
C2: (16.208,-7.449,42.754)
C6: (17.966,-5.968,41.993)
C5: (18.141,-6.850,40.924)
C4: (17.331,-7.947,40.860)
P: (18.597,-6.979,34.883)
C4': (16.996,-10.017,36.752)
C2': (15.688,-9.739,38.720)
O2': (15.075,-11.016,38.792)
N1: (16.988,-6.339,42.852)
N2: (15.285,-7.595,43.752)
N3: (16.360,-8.306,41.737)
N7: (19.014,-6.800,39.864)
N9: (17.720,-8.627,39.716)
O5': (17.727,-7.932,35.806)
O3': (14.581,-9.697,36.544)
OP2: (17.728,-6.009,34.188)
C3': (15.743,-9.306,37.274)
C1': (17.185,-9.871,39.098)
C5': (17.686,-9.334,35.599)
O6: (18.543,-4.947,42.295)
O4': (17.900,-10.102,37.906)
C8: (18.740,-7.867,39.181)
C2: (16.208,-7.449,42.754)
C6: (17.966,-5.968,41.993)
C5: (18.141,-6.850,40.924)
C4: (17.331,-7.947,40.860)
P: (18.597,-6.979,34.883)
C4': (16.996,-10.017,36.752)
C2': (15.688,-9.739,38.720)
O2': (15.075,-11.016,38.792)
N1: (16.988,-6.339,42.852)
N2: (15.285,-7.595,43.752)
N3: (16.360,-8.306,41.737)
N7: (19.014,-6.800,39.864)
N9: (17.720,-8.627,39.716)
O5': (17.727,-7.932,35.806)
O3': (14.581,-9.697,36.544)
Image (generated by PyMOL):