Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2J01:A538:A9
Extra
PDB:
ATOM 1 O3' U A 537 -21.690 113.647 221.293 1.00 41.96 O
ATOM 2 P U A 538 -21.653 112.057 221.071 1.00 20.56 P
ATOM 3 OP1 U A 538 -22.876 111.500 221.705 1.00 52.66 O
ATOM 4 OP2 U A 538 -20.311 111.513 221.442 1.00 52.66 O
ATOM 5 O5' U A 538 -21.855 111.932 219.505 1.00 21.17 O
ATOM 6 C5' U A 538 -21.531 110.730 218.849 1.00 21.17 C
ATOM 7 C4' U A 538 -21.081 111.009 217.443 1.00 21.17 C
ATOM 8 O4' U A 538 -20.133 112.103 217.408 1.00 21.17 O
ATOM 9 C3' U A 538 -20.350 109.822 216.844 1.00 21.17 C
ATOM 10 O3' U A 538 -21.311 108.882 216.364 1.00 21.17 O
ATOM 11 C2' U A 538 -19.446 110.469 215.798 1.00 21.17 C
ATOM 12 O2' U A 538 -20.073 110.719 214.556 1.00 21.17 O
ATOM 13 C1' U A 538 -19.122 111.817 216.457 1.00 21.17 C
ATOM 14 N1 U A 538 -17.805 111.895 217.120 1.00 46.28 N
ATOM 15 C2 U A 538 -16.667 111.789 216.323 1.00 46.28 C
ATOM 16 O2 U A 538 -16.705 111.619 215.117 1.00 46.28 O
ATOM 17 N3 U A 538 -15.478 111.893 216.994 1.00 46.28 N
ATOM 18 C4 U A 538 -15.296 112.098 218.342 1.00 46.28 C
ATOM 19 O4 U A 538 -14.156 112.320 218.769 1.00 46.28 O
ATOM 20 C5 U A 538 -16.508 112.179 219.098 1.00 46.28 C
ATOM 21 C6 U A 538 -17.689 112.079 218.480 1.00 46.28 C
ATOM 22 P A A 539 -21.289 107.366 216.906 1.00 48.37 P
ATOM 23 OP1 A A 539 -22.684 106.849 216.816 1.00 66.30 O
ATOM 24 OP2 A A 539 -20.560 107.281 218.200 1.00 66.61 O
ATOM 25 O5' A A 539 -20.403 106.644 215.804 1.00 27.53 O
TER
ATOM 1 O3' A B 8 -5.168 108.998 211.676 1.00 39.73 O
ATOM 2 P G B 9 -4.941 110.587 211.671 1.00 25.92 P
ATOM 3 OP1 G B 9 -3.713 110.899 210.905 1.00 51.99 O
ATOM 4 OP2 G B 9 -5.077 111.073 213.075 1.00 51.99 O
ATOM 5 O5' G B 9 -6.196 111.093 210.848 1.00 17.21 O
ATOM 6 C5' G B 9 -6.907 112.267 211.217 1.00 17.21 C
ATOM 7 C4' G B 9 -8.155 112.378 210.384 1.00 17.21 C
ATOM 8 O4' G B 9 -8.967 111.193 210.607 1.00 17.21 O
ATOM 9 C3' G B 9 -9.055 113.537 210.755 1.00 17.21 C
ATOM 10 O3' G B 9 -8.668 114.756 210.137 1.00 17.21 O
ATOM 11 C2' G B 9 -10.429 113.031 210.338 1.00 17.21 C
ATOM 12 O2' G B 9 -10.658 113.159 208.954 1.00 17.21 O
ATOM 13 C1' G B 9 -10.333 111.552 210.710 1.00 17.21 C
ATOM 14 N9 G B 9 -10.720 111.389 212.105 1.00 28.61 N
ATOM 15 C8 G B 9 -9.876 111.202 213.173 1.00 28.61 C
ATOM 16 N7 G B 9 -10.497 111.195 214.320 1.00 28.61 N
ATOM 17 C5 G B 9 -11.830 111.369 213.986 1.00 28.61 C
ATOM 18 C6 G B 9 -12.962 111.478 214.814 1.00 28.61 C
ATOM 19 O6 G B 9 -13.016 111.464 216.045 1.00 28.61 O
ATOM 20 N1 G B 9 -14.118 111.637 214.071 1.00 28.61 N
ATOM 21 C2 G B 9 -14.168 111.703 212.701 1.00 28.61 C
ATOM 22 N2 G B 9 -15.388 111.858 212.159 1.00 28.61 N
ATOM 23 N3 G B 9 -13.108 111.623 211.917 1.00 28.61 N
ATOM 24 C4 G B 9 -11.984 111.458 212.620 1.00 28.61 C
ATOM 25 P G B 10 -9.200 116.136 210.750 1.00 41.65 P
ATOM 26 OP1 G B 10 -8.725 117.249 209.896 1.00 61.78 O
ATOM 27 OP2 G B 10 -8.864 116.129 212.199 1.00 61.78 O
ATOM 28 O5' G B 10 -10.782 116.018 210.592 1.00 4.22 O
TER
ATOM 2 P U A 538 -21.653 112.057 221.071 1.00 20.56 P
ATOM 3 OP1 U A 538 -22.876 111.500 221.705 1.00 52.66 O
ATOM 4 OP2 U A 538 -20.311 111.513 221.442 1.00 52.66 O
ATOM 5 O5' U A 538 -21.855 111.932 219.505 1.00 21.17 O
ATOM 6 C5' U A 538 -21.531 110.730 218.849 1.00 21.17 C
ATOM 7 C4' U A 538 -21.081 111.009 217.443 1.00 21.17 C
ATOM 8 O4' U A 538 -20.133 112.103 217.408 1.00 21.17 O
ATOM 9 C3' U A 538 -20.350 109.822 216.844 1.00 21.17 C
ATOM 10 O3' U A 538 -21.311 108.882 216.364 1.00 21.17 O
ATOM 11 C2' U A 538 -19.446 110.469 215.798 1.00 21.17 C
ATOM 12 O2' U A 538 -20.073 110.719 214.556 1.00 21.17 O
ATOM 13 C1' U A 538 -19.122 111.817 216.457 1.00 21.17 C
ATOM 14 N1 U A 538 -17.805 111.895 217.120 1.00 46.28 N
ATOM 15 C2 U A 538 -16.667 111.789 216.323 1.00 46.28 C
ATOM 16 O2 U A 538 -16.705 111.619 215.117 1.00 46.28 O
ATOM 17 N3 U A 538 -15.478 111.893 216.994 1.00 46.28 N
ATOM 18 C4 U A 538 -15.296 112.098 218.342 1.00 46.28 C
ATOM 19 O4 U A 538 -14.156 112.320 218.769 1.00 46.28 O
ATOM 20 C5 U A 538 -16.508 112.179 219.098 1.00 46.28 C
ATOM 21 C6 U A 538 -17.689 112.079 218.480 1.00 46.28 C
ATOM 22 P A A 539 -21.289 107.366 216.906 1.00 48.37 P
ATOM 23 OP1 A A 539 -22.684 106.849 216.816 1.00 66.30 O
ATOM 24 OP2 A A 539 -20.560 107.281 218.200 1.00 66.61 O
ATOM 25 O5' A A 539 -20.403 106.644 215.804 1.00 27.53 O
TER
ATOM 1 O3' A B 8 -5.168 108.998 211.676 1.00 39.73 O
ATOM 2 P G B 9 -4.941 110.587 211.671 1.00 25.92 P
ATOM 3 OP1 G B 9 -3.713 110.899 210.905 1.00 51.99 O
ATOM 4 OP2 G B 9 -5.077 111.073 213.075 1.00 51.99 O
ATOM 5 O5' G B 9 -6.196 111.093 210.848 1.00 17.21 O
ATOM 6 C5' G B 9 -6.907 112.267 211.217 1.00 17.21 C
ATOM 7 C4' G B 9 -8.155 112.378 210.384 1.00 17.21 C
ATOM 8 O4' G B 9 -8.967 111.193 210.607 1.00 17.21 O
ATOM 9 C3' G B 9 -9.055 113.537 210.755 1.00 17.21 C
ATOM 10 O3' G B 9 -8.668 114.756 210.137 1.00 17.21 O
ATOM 11 C2' G B 9 -10.429 113.031 210.338 1.00 17.21 C
ATOM 12 O2' G B 9 -10.658 113.159 208.954 1.00 17.21 O
ATOM 13 C1' G B 9 -10.333 111.552 210.710 1.00 17.21 C
ATOM 14 N9 G B 9 -10.720 111.389 212.105 1.00 28.61 N
ATOM 15 C8 G B 9 -9.876 111.202 213.173 1.00 28.61 C
ATOM 16 N7 G B 9 -10.497 111.195 214.320 1.00 28.61 N
ATOM 17 C5 G B 9 -11.830 111.369 213.986 1.00 28.61 C
ATOM 18 C6 G B 9 -12.962 111.478 214.814 1.00 28.61 C
ATOM 19 O6 G B 9 -13.016 111.464 216.045 1.00 28.61 O
ATOM 20 N1 G B 9 -14.118 111.637 214.071 1.00 28.61 N
ATOM 21 C2 G B 9 -14.168 111.703 212.701 1.00 28.61 C
ATOM 22 N2 G B 9 -15.388 111.858 212.159 1.00 28.61 N
ATOM 23 N3 G B 9 -13.108 111.623 211.917 1.00 28.61 N
ATOM 24 C4 G B 9 -11.984 111.458 212.620 1.00 28.61 C
ATOM 25 P G B 10 -9.200 116.136 210.750 1.00 41.65 P
ATOM 26 OP1 G B 10 -8.725 117.249 209.896 1.00 61.78 O
ATOM 27 OP2 G B 10 -8.864 116.129 212.199 1.00 61.78 O
ATOM 28 O5' G B 10 -10.782 116.018 210.592 1.00 4.22 O
TER
Atoms:
C4: (-15.296,112.098,218.342)
N3: (-15.478,111.893,216.994)
OP1: (-22.876,111.500,221.705)
OP2: (-20.311,111.513,221.442)
C2: (-16.667,111.789,216.323)
C1': (-19.122,111.817,216.457)
C3': (-20.350,109.822,216.844)
O5': (-21.855,111.932,219.505)
O4': (-20.133,112.103,217.408)
C5': (-21.531,110.730,218.849)
P: (-21.653,112.057,221.071)
C4': (-21.081,111.009,217.443)
C2': (-19.446,110.469,215.798)
O2': (-20.073,110.719,214.556)
N1: (-17.805,111.895,217.120)
O4: (-14.156,112.320,218.769)
O2: (-16.705,111.619,215.117)
C6: (-17.689,112.079,218.480)
C5: (-16.508,112.179,219.098)
O3': (-21.311,108.882,216.364)
N3: (-15.478,111.893,216.994)
OP1: (-22.876,111.500,221.705)
OP2: (-20.311,111.513,221.442)
C2: (-16.667,111.789,216.323)
C1': (-19.122,111.817,216.457)
C3': (-20.350,109.822,216.844)
O5': (-21.855,111.932,219.505)
O4': (-20.133,112.103,217.408)
C5': (-21.531,110.730,218.849)
P: (-21.653,112.057,221.071)
C4': (-21.081,111.009,217.443)
C2': (-19.446,110.469,215.798)
O2': (-20.073,110.719,214.556)
N1: (-17.805,111.895,217.120)
O4: (-14.156,112.320,218.769)
O2: (-16.705,111.619,215.117)
C6: (-17.689,112.079,218.480)
C5: (-16.508,112.179,219.098)
O3': (-21.311,108.882,216.364)
OP1: (-3.713,110.899,210.905)
OP2: (-5.077,111.073,213.075)
C3': (-9.055,113.537,210.755)
C1': (-10.333,111.552,210.710)
C5': (-6.907,112.267,211.217)
O6: (-13.016,111.464,216.045)
O4': (-8.967,111.193,210.607)
C8: (-9.876,111.202,213.173)
C2: (-14.168,111.703,212.701)
C6: (-12.962,111.478,214.814)
C5: (-11.830,111.369,213.986)
C4: (-11.984,111.458,212.620)
P: (-4.941,110.587,211.671)
C4': (-8.155,112.378,210.384)
C2': (-10.429,113.031,210.338)
O2': (-10.658,113.159,208.954)
N1: (-14.118,111.637,214.071)
N2: (-15.388,111.858,212.159)
N3: (-13.108,111.623,211.917)
N7: (-10.497,111.195,214.320)
N9: (-10.720,111.389,212.105)
O5': (-6.196,111.093,210.848)
O3': (-8.668,114.756,210.137)
OP2: (-5.077,111.073,213.075)
C3': (-9.055,113.537,210.755)
C1': (-10.333,111.552,210.710)
C5': (-6.907,112.267,211.217)
O6: (-13.016,111.464,216.045)
O4': (-8.967,111.193,210.607)
C8: (-9.876,111.202,213.173)
C2: (-14.168,111.703,212.701)
C6: (-12.962,111.478,214.814)
C5: (-11.830,111.369,213.986)
C4: (-11.984,111.458,212.620)
P: (-4.941,110.587,211.671)
C4': (-8.155,112.378,210.384)
C2': (-10.429,113.031,210.338)
O2': (-10.658,113.159,208.954)
N1: (-14.118,111.637,214.071)
N2: (-15.388,111.858,212.159)
N3: (-13.108,111.623,211.917)
N7: (-10.497,111.195,214.320)
N9: (-10.720,111.389,212.105)
O5': (-6.196,111.093,210.848)
O3': (-8.668,114.756,210.137)
Image (generated by PyMOL):