Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1IK5:A4:B9
Extra
PDB:
ATOM 1 O3' A A 3 -2.270 -1.890 20.633 1.00 33.37 O
ATOM 2 P U A 4 -0.827 -2.297 20.076 1.00 37.96 P
ATOM 3 OP1 U A 4 -0.151 -3.057 21.192 1.00 41.29 O
ATOM 4 OP2 U A 4 -0.147 -1.128 19.486 1.00 37.42 O
ATOM 5 O5' U A 4 -1.122 -3.350 18.903 1.00 33.42 O
ATOM 6 C5' U A 4 -1.650 -4.656 19.203 1.00 32.99 C
ATOM 7 C4' U A 4 -1.955 -5.427 17.930 1.00 33.82 C
ATOM 8 O4' U A 4 -3.076 -4.814 17.241 1.00 34.80 O
ATOM 9 C3' U A 4 -0.844 -5.501 16.890 1.00 35.75 C
ATOM 10 O3' U A 4 0.008 -6.625 17.149 1.00 39.38 O
ATOM 11 C2' U A 4 -1.620 -5.735 15.594 1.00 35.12 C
ATOM 12 O2' U A 4 -1.971 -7.088 15.405 1.00 37.05 O
ATOM 13 C1' U A 4 -2.906 -4.945 15.845 1.00 32.08 C
ATOM 14 N1 U A 4 -2.893 -3.616 15.216 1.00 31.66 N
ATOM 15 C2 U A 4 -3.492 -3.515 13.967 1.00 31.61 C
ATOM 16 O2 U A 4 -4.005 -4.459 13.408 1.00 28.50 O
ATOM 17 N3 U A 4 -3.458 -2.266 13.390 1.00 29.14 N
ATOM 18 C4 U A 4 -2.890 -1.122 13.894 1.00 31.92 C
ATOM 19 O4 U A 4 -2.891 -0.100 13.193 1.00 28.03 O
ATOM 20 C5 U A 4 -2.280 -1.282 15.197 1.00 30.88 C
ATOM 21 C6 U A 4 -2.310 -2.502 15.804 1.00 31.91 C
ATOM 22 P U A 5 1.583 -6.407 17.423 1.00 44.49 P
ATOM 23 OP1 U A 5 2.305 -7.704 17.383 1.00 43.99 O
ATOM 24 OP2 U A 5 1.676 -5.574 18.641 1.00 39.98 O
ATOM 25 O5' U A 5 2.111 -5.523 16.193 1.00 43.36 O
TER
ATOM 1 O3' G B 8 -7.308 -1.068 2.352 1.00 31.38 O
ATOM 2 P G B 9 -8.445 -1.177 3.496 1.00 32.71 P
ATOM 3 OP1 G B 9 -9.757 -1.229 2.791 1.00 30.40 O
ATOM 4 OP2 G B 9 -8.232 -0.165 4.584 1.00 31.20 O
ATOM 5 O5' G B 9 -8.235 -2.597 4.185 1.00 30.11 O
ATOM 6 C5' G B 9 -8.274 -3.802 3.424 1.00 32.31 C
ATOM 7 C4' G B 9 -8.000 -5.003 4.313 1.00 34.47 C
ATOM 8 O4' G B 9 -6.652 -4.977 4.844 1.00 32.79 O
ATOM 9 C3' G B 9 -8.866 -5.113 5.548 1.00 35.14 C
ATOM 10 O3' G B 9 -10.110 -5.689 5.227 1.00 37.24 O
ATOM 11 C2' G B 9 -8.063 -6.058 6.424 1.00 34.05 C
ATOM 12 O2' G B 9 -8.196 -7.419 6.061 1.00 34.02 O
ATOM 13 C1' G B 9 -6.642 -5.576 6.136 1.00 35.27 C
ATOM 14 N9 G B 9 -6.252 -4.571 7.112 1.00 32.22 N
ATOM 15 C8 G B 9 -6.168 -3.204 6.932 1.00 34.53 C
ATOM 16 N7 G B 9 -5.785 -2.566 8.011 1.00 30.87 N
ATOM 17 C5 G B 9 -5.594 -3.576 8.953 1.00 32.79 C
ATOM 18 C6 G B 9 -5.157 -3.499 10.289 1.00 31.94 C
ATOM 19 O6 G B 9 -4.830 -2.494 10.917 1.00 30.31 O
ATOM 20 N1 G B 9 -5.121 -4.761 10.900 1.00 30.22 N
ATOM 21 C2 G B 9 -5.456 -5.951 10.277 1.00 35.31 C
ATOM 22 N2 G B 9 -5.364 -7.086 11.026 1.00 35.35 N
ATOM 23 N3 G B 9 -5.848 -6.032 9.018 1.00 32.66 N
ATOM 24 C4 G B 9 -5.894 -4.815 8.418 1.00 33.46 C
ATOM 25 P U B 10 -11.414 -5.212 6.005 1.00 39.13 P
ATOM 26 OP1 U B 10 -12.554 -5.960 5.411 1.00 45.34 O
ATOM 27 OP2 U B 10 -11.488 -3.744 6.118 1.00 37.38 O
ATOM 28 O5' U B 10 -11.221 -5.751 7.484 1.00 35.70 O
TER
ATOM 2 P U A 4 -0.827 -2.297 20.076 1.00 37.96 P
ATOM 3 OP1 U A 4 -0.151 -3.057 21.192 1.00 41.29 O
ATOM 4 OP2 U A 4 -0.147 -1.128 19.486 1.00 37.42 O
ATOM 5 O5' U A 4 -1.122 -3.350 18.903 1.00 33.42 O
ATOM 6 C5' U A 4 -1.650 -4.656 19.203 1.00 32.99 C
ATOM 7 C4' U A 4 -1.955 -5.427 17.930 1.00 33.82 C
ATOM 8 O4' U A 4 -3.076 -4.814 17.241 1.00 34.80 O
ATOM 9 C3' U A 4 -0.844 -5.501 16.890 1.00 35.75 C
ATOM 10 O3' U A 4 0.008 -6.625 17.149 1.00 39.38 O
ATOM 11 C2' U A 4 -1.620 -5.735 15.594 1.00 35.12 C
ATOM 12 O2' U A 4 -1.971 -7.088 15.405 1.00 37.05 O
ATOM 13 C1' U A 4 -2.906 -4.945 15.845 1.00 32.08 C
ATOM 14 N1 U A 4 -2.893 -3.616 15.216 1.00 31.66 N
ATOM 15 C2 U A 4 -3.492 -3.515 13.967 1.00 31.61 C
ATOM 16 O2 U A 4 -4.005 -4.459 13.408 1.00 28.50 O
ATOM 17 N3 U A 4 -3.458 -2.266 13.390 1.00 29.14 N
ATOM 18 C4 U A 4 -2.890 -1.122 13.894 1.00 31.92 C
ATOM 19 O4 U A 4 -2.891 -0.100 13.193 1.00 28.03 O
ATOM 20 C5 U A 4 -2.280 -1.282 15.197 1.00 30.88 C
ATOM 21 C6 U A 4 -2.310 -2.502 15.804 1.00 31.91 C
ATOM 22 P U A 5 1.583 -6.407 17.423 1.00 44.49 P
ATOM 23 OP1 U A 5 2.305 -7.704 17.383 1.00 43.99 O
ATOM 24 OP2 U A 5 1.676 -5.574 18.641 1.00 39.98 O
ATOM 25 O5' U A 5 2.111 -5.523 16.193 1.00 43.36 O
TER
ATOM 1 O3' G B 8 -7.308 -1.068 2.352 1.00 31.38 O
ATOM 2 P G B 9 -8.445 -1.177 3.496 1.00 32.71 P
ATOM 3 OP1 G B 9 -9.757 -1.229 2.791 1.00 30.40 O
ATOM 4 OP2 G B 9 -8.232 -0.165 4.584 1.00 31.20 O
ATOM 5 O5' G B 9 -8.235 -2.597 4.185 1.00 30.11 O
ATOM 6 C5' G B 9 -8.274 -3.802 3.424 1.00 32.31 C
ATOM 7 C4' G B 9 -8.000 -5.003 4.313 1.00 34.47 C
ATOM 8 O4' G B 9 -6.652 -4.977 4.844 1.00 32.79 O
ATOM 9 C3' G B 9 -8.866 -5.113 5.548 1.00 35.14 C
ATOM 10 O3' G B 9 -10.110 -5.689 5.227 1.00 37.24 O
ATOM 11 C2' G B 9 -8.063 -6.058 6.424 1.00 34.05 C
ATOM 12 O2' G B 9 -8.196 -7.419 6.061 1.00 34.02 O
ATOM 13 C1' G B 9 -6.642 -5.576 6.136 1.00 35.27 C
ATOM 14 N9 G B 9 -6.252 -4.571 7.112 1.00 32.22 N
ATOM 15 C8 G B 9 -6.168 -3.204 6.932 1.00 34.53 C
ATOM 16 N7 G B 9 -5.785 -2.566 8.011 1.00 30.87 N
ATOM 17 C5 G B 9 -5.594 -3.576 8.953 1.00 32.79 C
ATOM 18 C6 G B 9 -5.157 -3.499 10.289 1.00 31.94 C
ATOM 19 O6 G B 9 -4.830 -2.494 10.917 1.00 30.31 O
ATOM 20 N1 G B 9 -5.121 -4.761 10.900 1.00 30.22 N
ATOM 21 C2 G B 9 -5.456 -5.951 10.277 1.00 35.31 C
ATOM 22 N2 G B 9 -5.364 -7.086 11.026 1.00 35.35 N
ATOM 23 N3 G B 9 -5.848 -6.032 9.018 1.00 32.66 N
ATOM 24 C4 G B 9 -5.894 -4.815 8.418 1.00 33.46 C
ATOM 25 P U B 10 -11.414 -5.212 6.005 1.00 39.13 P
ATOM 26 OP1 U B 10 -12.554 -5.960 5.411 1.00 45.34 O
ATOM 27 OP2 U B 10 -11.488 -3.744 6.118 1.00 37.38 O
ATOM 28 O5' U B 10 -11.221 -5.751 7.484 1.00 35.70 O
TER
Atoms:
C4: (-2.890,-1.122,13.894)
N3: (-3.458,-2.266,13.390)
OP1: (-0.151,-3.057,21.192)
OP2: (-0.147,-1.128,19.486)
C2: (-3.492,-3.515,13.967)
C1': (-2.906,-4.945,15.845)
C3': (-0.844,-5.501,16.890)
O5': (-1.122,-3.350,18.903)
O4': (-3.076,-4.814,17.241)
C5': (-1.650,-4.656,19.203)
P: (-0.827,-2.297,20.076)
C4': (-1.955,-5.427,17.930)
C2': (-1.620,-5.735,15.594)
O2': (-1.971,-7.088,15.405)
N1: (-2.893,-3.616,15.216)
O4: (-2.891,-0.100,13.193)
O2: (-4.005,-4.459,13.408)
C6: (-2.310,-2.502,15.804)
C5: (-2.280,-1.282,15.197)
O3': (0.008,-6.625,17.149)
N3: (-3.458,-2.266,13.390)
OP1: (-0.151,-3.057,21.192)
OP2: (-0.147,-1.128,19.486)
C2: (-3.492,-3.515,13.967)
C1': (-2.906,-4.945,15.845)
C3': (-0.844,-5.501,16.890)
O5': (-1.122,-3.350,18.903)
O4': (-3.076,-4.814,17.241)
C5': (-1.650,-4.656,19.203)
P: (-0.827,-2.297,20.076)
C4': (-1.955,-5.427,17.930)
C2': (-1.620,-5.735,15.594)
O2': (-1.971,-7.088,15.405)
N1: (-2.893,-3.616,15.216)
O4: (-2.891,-0.100,13.193)
O2: (-4.005,-4.459,13.408)
C6: (-2.310,-2.502,15.804)
C5: (-2.280,-1.282,15.197)
O3': (0.008,-6.625,17.149)
OP1: (-9.757,-1.229,2.791)
OP2: (-8.232,-0.165,4.584)
C3': (-8.866,-5.113,5.548)
C1': (-6.642,-5.576,6.136)
C5': (-8.274,-3.802,3.424)
O6: (-4.830,-2.494,10.917)
O4': (-6.652,-4.977,4.844)
C8: (-6.168,-3.204,6.932)
C2: (-5.456,-5.951,10.277)
C6: (-5.157,-3.499,10.289)
C5: (-5.594,-3.576,8.953)
C4: (-5.894,-4.815,8.418)
P: (-8.445,-1.177,3.496)
C4': (-8.000,-5.003,4.313)
C2': (-8.063,-6.058,6.424)
O2': (-8.196,-7.419,6.061)
N1: (-5.121,-4.761,10.900)
N2: (-5.364,-7.086,11.026)
N3: (-5.848,-6.032,9.018)
N7: (-5.785,-2.566,8.011)
N9: (-6.252,-4.571,7.112)
O5': (-8.235,-2.597,4.185)
O3': (-10.110,-5.689,5.227)
OP2: (-8.232,-0.165,4.584)
C3': (-8.866,-5.113,5.548)
C1': (-6.642,-5.576,6.136)
C5': (-8.274,-3.802,3.424)
O6: (-4.830,-2.494,10.917)
O4': (-6.652,-4.977,4.844)
C8: (-6.168,-3.204,6.932)
C2: (-5.456,-5.951,10.277)
C6: (-5.157,-3.499,10.289)
C5: (-5.594,-3.576,8.953)
C4: (-5.894,-4.815,8.418)
P: (-8.445,-1.177,3.496)
C4': (-8.000,-5.003,4.313)
C2': (-8.063,-6.058,6.424)
O2': (-8.196,-7.419,6.061)
N1: (-5.121,-4.761,10.900)
N2: (-5.364,-7.086,11.026)
N3: (-5.848,-6.032,9.018)
N7: (-5.785,-2.566,8.011)
N9: (-6.252,-4.571,7.112)
O5': (-8.235,-2.597,4.185)
O3': (-10.110,-5.689,5.227)
Image (generated by PyMOL):