Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:0482:0486
Extra
PDB:
ATOM 1 O3' U A 481 24.951 177.750 76.774 1.00 53.92 O
ATOM 2 P C A 482 26.157 178.794 76.948 1.00 56.23 P
ATOM 3 OP1 C A 482 26.190 179.169 78.385 1.00 55.54 O
ATOM 4 OP2 C A 482 26.021 179.850 75.910 1.00 56.61 O
ATOM 5 O5' C A 482 27.464 177.949 76.608 1.00 56.33 O
ATOM 6 C5' C A 482 27.862 176.843 77.432 1.00 55.37 C
ATOM 7 C4' C A 482 28.983 176.082 76.775 1.00 55.89 C
ATOM 8 O4' C A 482 28.509 175.437 75.565 1.00 55.35 O
ATOM 9 C3' C A 482 30.159 176.918 76.299 1.00 56.89 C
ATOM 10 O3' C A 482 31.028 177.252 77.380 1.00 57.85 O
ATOM 11 C2' C A 482 30.812 175.993 75.273 1.00 56.88 C
ATOM 12 O2' C A 482 31.637 174.997 75.844 1.00 58.92 O
ATOM 13 C1' C A 482 29.586 175.319 74.647 1.00 55.22 C
ATOM 14 N1 C A 482 29.186 175.898 73.354 1.00 53.45 N
ATOM 15 C2 C A 482 29.525 175.214 72.176 1.00 53.87 C
ATOM 16 O2 C A 482 30.146 174.142 72.255 1.00 53.41 O
ATOM 17 N3 C A 482 29.167 175.739 70.984 1.00 53.48 N
ATOM 18 C4 C A 482 28.496 176.891 70.936 1.00 52.10 C
ATOM 19 N4 C A 482 28.156 177.364 69.734 1.00 51.06 N
ATOM 20 C5 C A 482 28.141 177.607 72.115 1.00 51.08 C
ATOM 21 C6 C A 482 28.502 177.080 73.290 1.00 51.90 C
ATOM 22 P A A 483 31.698 178.713 77.448 1.00 57.21 P
ATOM 23 OP1 A A 483 32.357 178.863 78.767 1.00 56.48 O
ATOM 24 OP2 A A 483 30.663 179.694 77.029 1.00 58.32 O
ATOM 25 O5' A A 483 32.838 178.669 76.340 1.00 54.09 O
TER
ATOM 1 O3' A B 485 31.731 172.238 64.988 1.00 85.98 O
ATOM 2 P A B 486 31.616 171.232 66.242 1.00 82.76 P
ATOM 3 OP1 A B 486 30.967 169.994 65.721 1.00 83.62 O
ATOM 4 OP2 A B 486 30.974 171.983 67.353 1.00 82.69 O
ATOM 5 O5' A B 486 33.111 170.887 66.681 1.00 76.05 O
ATOM 6 C5' A B 486 33.784 169.695 66.210 1.00 65.70 C
ATOM 7 C4' A B 486 34.117 168.775 67.369 1.00 58.94 C
ATOM 8 O4' A B 486 34.563 169.575 68.494 1.00 57.80 O
ATOM 9 C3' A B 486 32.966 167.967 67.945 1.00 56.88 C
ATOM 10 O3' A B 486 32.758 166.767 67.213 1.00 54.55 O
ATOM 11 C2' A B 486 33.446 167.661 69.356 1.00 55.41 C
ATOM 12 O2' A B 486 34.350 166.578 69.413 1.00 53.11 O
ATOM 13 C1' A B 486 34.171 168.959 69.711 1.00 54.87 C
ATOM 14 N9 A B 486 33.336 169.896 70.464 1.00 53.70 N
ATOM 15 C8 A B 486 32.746 171.055 70.025 1.00 52.41 C
ATOM 16 N7 A B 486 32.055 171.678 70.947 1.00 52.64 N
ATOM 17 C5 A B 486 32.198 170.877 72.070 1.00 52.96 C
ATOM 18 C6 A B 486 31.705 170.990 73.379 1.00 54.73 C
ATOM 19 N6 A B 486 30.941 172.002 73.797 1.00 55.13 N
ATOM 20 N1 A B 486 32.030 170.016 74.259 1.00 56.24 N
ATOM 21 C2 A B 486 32.800 169.004 73.839 1.00 54.59 C
ATOM 22 N3 A B 486 33.326 168.790 72.636 1.00 53.70 N
ATOM 23 C4 A B 486 32.984 169.775 71.788 1.00 53.45 C
ATOM 24 P G B 487 31.297 166.108 67.164 1.00 50.64 P
ATOM 25 OP1 G B 487 31.464 164.732 66.635 1.00 51.10 O
ATOM 26 OP2 G B 487 30.382 167.055 66.479 1.00 51.48 O
ATOM 27 O5' G B 487 30.856 166.021 68.690 1.00 48.72 O
TER
ATOM 2 P C A 482 26.157 178.794 76.948 1.00 56.23 P
ATOM 3 OP1 C A 482 26.190 179.169 78.385 1.00 55.54 O
ATOM 4 OP2 C A 482 26.021 179.850 75.910 1.00 56.61 O
ATOM 5 O5' C A 482 27.464 177.949 76.608 1.00 56.33 O
ATOM 6 C5' C A 482 27.862 176.843 77.432 1.00 55.37 C
ATOM 7 C4' C A 482 28.983 176.082 76.775 1.00 55.89 C
ATOM 8 O4' C A 482 28.509 175.437 75.565 1.00 55.35 O
ATOM 9 C3' C A 482 30.159 176.918 76.299 1.00 56.89 C
ATOM 10 O3' C A 482 31.028 177.252 77.380 1.00 57.85 O
ATOM 11 C2' C A 482 30.812 175.993 75.273 1.00 56.88 C
ATOM 12 O2' C A 482 31.637 174.997 75.844 1.00 58.92 O
ATOM 13 C1' C A 482 29.586 175.319 74.647 1.00 55.22 C
ATOM 14 N1 C A 482 29.186 175.898 73.354 1.00 53.45 N
ATOM 15 C2 C A 482 29.525 175.214 72.176 1.00 53.87 C
ATOM 16 O2 C A 482 30.146 174.142 72.255 1.00 53.41 O
ATOM 17 N3 C A 482 29.167 175.739 70.984 1.00 53.48 N
ATOM 18 C4 C A 482 28.496 176.891 70.936 1.00 52.10 C
ATOM 19 N4 C A 482 28.156 177.364 69.734 1.00 51.06 N
ATOM 20 C5 C A 482 28.141 177.607 72.115 1.00 51.08 C
ATOM 21 C6 C A 482 28.502 177.080 73.290 1.00 51.90 C
ATOM 22 P A A 483 31.698 178.713 77.448 1.00 57.21 P
ATOM 23 OP1 A A 483 32.357 178.863 78.767 1.00 56.48 O
ATOM 24 OP2 A A 483 30.663 179.694 77.029 1.00 58.32 O
ATOM 25 O5' A A 483 32.838 178.669 76.340 1.00 54.09 O
TER
ATOM 1 O3' A B 485 31.731 172.238 64.988 1.00 85.98 O
ATOM 2 P A B 486 31.616 171.232 66.242 1.00 82.76 P
ATOM 3 OP1 A B 486 30.967 169.994 65.721 1.00 83.62 O
ATOM 4 OP2 A B 486 30.974 171.983 67.353 1.00 82.69 O
ATOM 5 O5' A B 486 33.111 170.887 66.681 1.00 76.05 O
ATOM 6 C5' A B 486 33.784 169.695 66.210 1.00 65.70 C
ATOM 7 C4' A B 486 34.117 168.775 67.369 1.00 58.94 C
ATOM 8 O4' A B 486 34.563 169.575 68.494 1.00 57.80 O
ATOM 9 C3' A B 486 32.966 167.967 67.945 1.00 56.88 C
ATOM 10 O3' A B 486 32.758 166.767 67.213 1.00 54.55 O
ATOM 11 C2' A B 486 33.446 167.661 69.356 1.00 55.41 C
ATOM 12 O2' A B 486 34.350 166.578 69.413 1.00 53.11 O
ATOM 13 C1' A B 486 34.171 168.959 69.711 1.00 54.87 C
ATOM 14 N9 A B 486 33.336 169.896 70.464 1.00 53.70 N
ATOM 15 C8 A B 486 32.746 171.055 70.025 1.00 52.41 C
ATOM 16 N7 A B 486 32.055 171.678 70.947 1.00 52.64 N
ATOM 17 C5 A B 486 32.198 170.877 72.070 1.00 52.96 C
ATOM 18 C6 A B 486 31.705 170.990 73.379 1.00 54.73 C
ATOM 19 N6 A B 486 30.941 172.002 73.797 1.00 55.13 N
ATOM 20 N1 A B 486 32.030 170.016 74.259 1.00 56.24 N
ATOM 21 C2 A B 486 32.800 169.004 73.839 1.00 54.59 C
ATOM 22 N3 A B 486 33.326 168.790 72.636 1.00 53.70 N
ATOM 23 C4 A B 486 32.984 169.775 71.788 1.00 53.45 C
ATOM 24 P G B 487 31.297 166.108 67.164 1.00 50.64 P
ATOM 25 OP1 G B 487 31.464 164.732 66.635 1.00 51.10 O
ATOM 26 OP2 G B 487 30.382 167.055 66.479 1.00 51.48 O
ATOM 27 O5' G B 487 30.856 166.021 68.690 1.00 48.72 O
TER
Atoms:
C2: (29.525,175.214,72.176)
OP1: (26.190,179.169,78.385)
OP2: (26.021,179.850,75.910)
C4: (28.496,176.891,70.936)
O5': (27.464,177.949,76.608)
C3': (30.159,176.918,76.299)
C1': (29.586,175.319,74.647)
O4': (28.509,175.437,75.565)
C5': (27.862,176.843,77.432)
P: (26.157,178.794,76.948)
O2: (30.146,174.142,72.255)
C4': (28.983,176.082,76.775)
C2': (30.812,175.993,75.273)
O2': (31.637,174.997,75.844)
N1: (29.186,175.898,73.354)
N3: (29.167,175.739,70.984)
N4: (28.156,177.364,69.734)
C6: (28.502,177.080,73.290)
C5: (28.141,177.607,72.115)
O3': (31.028,177.252,77.380)
OP1: (26.190,179.169,78.385)
OP2: (26.021,179.850,75.910)
C4: (28.496,176.891,70.936)
O5': (27.464,177.949,76.608)
C3': (30.159,176.918,76.299)
C1': (29.586,175.319,74.647)
O4': (28.509,175.437,75.565)
C5': (27.862,176.843,77.432)
P: (26.157,178.794,76.948)
O2: (30.146,174.142,72.255)
C4': (28.983,176.082,76.775)
C2': (30.812,175.993,75.273)
O2': (31.637,174.997,75.844)
N1: (29.186,175.898,73.354)
N3: (29.167,175.739,70.984)
N4: (28.156,177.364,69.734)
C6: (28.502,177.080,73.290)
C5: (28.141,177.607,72.115)
O3': (31.028,177.252,77.380)
OP1: (30.967,169.994,65.721)
OP2: (30.974,171.983,67.353)
C3': (32.966,167.967,67.945)
C1': (34.171,168.959,69.711)
C5': (33.784,169.695,66.210)
O4': (34.563,169.575,68.494)
C8: (32.746,171.055,70.025)
O2': (34.350,166.578,69.413)
C6: (31.705,170.990,73.379)
C5: (32.198,170.877,72.070)
C4: (32.984,169.775,71.788)
P: (31.616,171.232,66.242)
C4': (34.117,168.775,67.369)
C2': (33.446,167.661,69.356)
C2: (32.800,169.004,73.839)
N1: (32.030,170.016,74.259)
N3: (33.326,168.790,72.636)
N6: (30.941,172.002,73.797)
N7: (32.055,171.678,70.947)
N9: (33.336,169.896,70.464)
O5': (33.111,170.887,66.681)
O3': (32.758,166.767,67.213)
OP2: (30.974,171.983,67.353)
C3': (32.966,167.967,67.945)
C1': (34.171,168.959,69.711)
C5': (33.784,169.695,66.210)
O4': (34.563,169.575,68.494)
C8: (32.746,171.055,70.025)
O2': (34.350,166.578,69.413)
C6: (31.705,170.990,73.379)
C5: (32.198,170.877,72.070)
C4: (32.984,169.775,71.788)
P: (31.616,171.232,66.242)
C4': (34.117,168.775,67.369)
C2': (33.446,167.661,69.356)
C2: (32.800,169.004,73.839)
N1: (32.030,170.016,74.259)
N3: (33.326,168.790,72.636)
N6: (30.941,172.002,73.797)
N7: (32.055,171.678,70.947)
N9: (33.336,169.896,70.464)
O5': (33.111,170.887,66.681)
O3': (32.758,166.767,67.213)
Image (generated by PyMOL):