ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5D:1623:1645

Extra

PDB:
ATOM 1 O3' G A 622 82.797 -51.391 84.760 1.00 40.89 O
ATOM 2 P U A 623 83.492 -50.435 85.826 1.00 40.90 P
ATOM 3 OP1 U A 623 84.839 -50.143 85.296 1.00 41.04 O
ATOM 4 OP2 U A 623 83.372 -51.084 87.126 1.00 41.25 O
ATOM 5 O5' U A 623 82.607 -49.121 85.818 1.00 40.36 O
ATOM 6 C5' U A 623 82.275 -48.436 84.618 1.00 39.95 C
ATOM 7 C4' U A 623 81.020 -47.624 84.825 1.00 39.51 C
ATOM 8 O4' U A 623 79.931 -48.525 85.151 1.00 39.57 O
ATOM 9 C3' U A 623 81.077 -46.658 86.015 1.00 39.45 C
ATOM 10 O3' U A 623 81.601 -45.397 85.676 1.00 39.21 O
ATOM 11 C2' U A 623 79.651 -46.591 86.526 1.00 39.22 C
ATOM 12 O2' U A 623 78.931 -45.637 85.812 1.00 38.75 O
ATOM 13 C1' U A 623 79.107 -47.949 86.155 1.00 39.40 C
ATOM 14 N1 U A 623 79.016 -48.859 87.316 1.00 39.78 N
ATOM 15 C2 U A 623 77.937 -48.644 88.132 1.00 39.65 C
ATOM 16 O2 U A 623 77.117 -47.784 87.978 1.00 39.25 O
ATOM 17 N3 U A 623 77.825 -49.480 89.170 1.00 40.00 N
ATOM 18 C4 U A 623 78.619 -50.532 89.513 1.00 40.49 C
ATOM 19 O4 U A 623 78.285 -51.190 90.499 1.00 40.77 O
ATOM 20 C5 U A 623 79.718 -50.734 88.632 1.00 40.62 C
ATOM 21 C6 U A 623 79.878 -49.906 87.576 1.00 40.27 C
ATOM 22 P G A 624 82.548 -44.626 86.713 1.00 43.63 P
ATOM 23 OP1 G A 624 83.413 -43.717 85.913 1.00 43.49 O
ATOM 24 OP2 G A 624 83.157 -45.648 87.590 1.00 44.14 O
ATOM 25 O5' G A 624 81.553 -43.757 87.571 1.00 43.36 O
TER

ATOM 1 O3' C B 644 68.712 -49.195 96.583 1.00 45.74 O
ATOM 2 P G B 645 68.089 -49.877 95.284 1.00 44.97 P
ATOM 3 OP1 G B 645 66.610 -49.934 95.512 1.00 44.81 O
ATOM 4 OP2 G B 645 68.837 -51.129 95.047 1.00 45.37 O
ATOM 5 O5' G B 645 68.431 -48.837 94.124 1.00 44.54 O
ATOM 6 C5' G B 645 67.931 -47.517 94.141 1.00 44.14 C
ATOM 7 C4' G B 645 68.497 -46.735 92.992 1.00 43.83 C
ATOM 8 O4' G B 645 69.921 -46.505 93.189 1.00 44.03 O
ATOM 9 C3' G B 645 68.452 -47.422 91.630 1.00 43.75 C
ATOM 10 O3' G B 645 67.166 -47.407 91.051 1.00 43.45 O
ATOM 11 C2' G B 645 69.472 -46.611 90.849 1.00 43.57 C
ATOM 12 O2' G B 645 68.926 -45.351 90.498 1.00 43.14 O
ATOM 13 C1' G B 645 70.545 -46.381 91.917 1.00 43.87 C
ATOM 14 N9 G B 645 71.654 -47.347 91.811 1.00 44.27 N
ATOM 15 C8 G B 645 71.969 -48.449 92.571 1.00 44.73 C
ATOM 16 N7 G B 645 73.073 -49.071 92.224 1.00 45.01 N
ATOM 17 C5 G B 645 73.499 -48.307 91.158 1.00 44.70 C
ATOM 18 C6 G B 645 74.620 -48.439 90.340 1.00 44.80 C
ATOM 19 O6 G B 645 75.476 -49.251 90.338 1.00 45.16 O
ATOM 20 N1 G B 645 74.706 -47.480 89.392 1.00 44.42 N
ATOM 21 C2 G B 645 73.808 -46.495 89.248 1.00 44.00 C
ATOM 22 N2 G B 645 74.115 -45.681 88.250 1.00 43.70 N
ATOM 23 N3 G B 645 72.747 -46.311 89.989 1.00 43.89 N
ATOM 24 C4 G B 645 72.644 -47.257 90.899 1.00 44.25 C
ATOM 25 P C B 646 66.660 -48.574 90.062 1.00 45.21 P
ATOM 26 OP1 C B 646 65.242 -48.214 89.723 1.00 44.87 O
ATOM 27 OP2 C B 646 66.949 -49.890 90.700 1.00 45.69 O
ATOM 28 O5' C B 646 67.556 -48.385 88.768 1.00 45.09 O
TER

Atoms:
C4: (78.619,-50.532,89.513)
N3: (77.825,-49.480,89.170)
OP1: (84.839,-50.143,85.296)
OP2: (83.372,-51.084,87.126)
C2: (77.937,-48.644,88.132)
C1': (79.107,-47.949,86.155)
C3': (81.077,-46.658,86.015)
O5': (82.607,-49.121,85.818)
O4': (79.931,-48.525,85.151)
C5': (82.275,-48.436,84.618)
P: (83.492,-50.435,85.826)
C4': (81.020,-47.624,84.825)
C2': (79.651,-46.591,86.526)
O2': (78.931,-45.637,85.812)
N1: (79.016,-48.859,87.316)
O4: (78.285,-51.190,90.499)
O2: (77.117,-47.784,87.978)
C6: (79.878,-49.906,87.576)
C5: (79.718,-50.734,88.632)
O3': (81.601,-45.397,85.676)
OP1: (66.610,-49.934,95.512)
OP2: (68.837,-51.129,95.047)
C3': (68.452,-47.422,91.630)
C1': (70.545,-46.381,91.917)
C5': (67.931,-47.517,94.141)
O6: (75.476,-49.251,90.338)
O4': (69.921,-46.505,93.189)
C8: (71.969,-48.449,92.571)
C2: (73.808,-46.495,89.248)
C6: (74.620,-48.439,90.340)
C5: (73.499,-48.307,91.158)
C4: (72.644,-47.257,90.899)
P: (68.089,-49.877,95.284)
C4': (68.497,-46.735,92.992)
C2': (69.472,-46.611,90.849)
O2': (68.926,-45.351,90.498)
N1: (74.706,-47.480,89.392)
N2: (74.115,-45.681,88.250)
N3: (72.747,-46.311,89.989)
N7: (73.073,-49.071,92.224)
N9: (71.654,-47.347,91.811)
O5': (68.431,-48.837,94.124)
O3': (67.166,-47.407,91.051)
Image (generated by PyMOL):
PyMOL image
show in jmol