ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3MXH:R82:R42

Extra

PDB:
ATOM 1 O3' G A 81 -23.371 -11.451 3.256 1.00 59.52 O
ATOM 2 P U A 82 -23.338 -11.730 4.837 1.00 60.12 P
ATOM 3 OP1 U A 82 -24.310 -12.818 5.112 1.00 60.26 O
ATOM 4 OP2 U A 82 -23.441 -10.439 5.557 1.00 56.91 O
ATOM 5 O5' U A 82 -21.853 -12.271 5.081 1.00 57.18 O
ATOM 6 C5' U A 82 -21.442 -13.530 4.548 1.00 57.40 C
ATOM 7 C4' U A 82 -19.931 -13.662 4.582 1.00 53.48 C
ATOM 8 O4' U A 82 -19.312 -12.544 3.894 1.00 50.53 O
ATOM 9 C3' U A 82 -19.297 -13.590 5.962 1.00 50.82 C
ATOM 10 O3' U A 82 -19.489 -14.794 6.700 1.00 50.64 O
ATOM 11 C2' U A 82 -17.848 -13.346 5.566 1.00 48.55 C
ATOM 12 O2' U A 82 -17.226 -14.506 5.044 1.00 48.49 O
ATOM 13 C1' U A 82 -18.032 -12.305 4.461 1.00 48.00 C
ATOM 14 N1 U A 82 -17.945 -10.877 4.947 1.00 48.01 N
ATOM 15 C2 U A 82 -16.700 -10.311 5.182 1.00 46.47 C
ATOM 16 O2 U A 82 -15.642 -10.896 5.017 1.00 47.20 O
ATOM 17 N3 U A 82 -16.730 -9.009 5.617 1.00 44.63 N
ATOM 18 C4 U A 82 -17.850 -8.224 5.846 1.00 47.58 C
ATOM 19 O4 U A 82 -17.705 -7.071 6.240 1.00 46.43 O
ATOM 20 C5 U A 82 -19.116 -8.871 5.582 1.00 48.41 C
ATOM 21 C6 U A 82 -19.111 -10.143 5.150 1.00 49.93 C
ATOM 22 P U A 83 -19.677 -14.725 8.293 1.00 52.35 P
ATOM 23 OP1 U A 83 -20.216 -16.029 8.753 1.00 55.07 O
ATOM 24 OP2 U A 83 -20.401 -13.478 8.634 1.00 53.58 O
ATOM 25 O5' U A 83 -18.175 -14.562 8.807 1.00 48.11 O
TER

ATOM 1 O3' A B 41 -5.349 -3.014 6.402 1.00 39.66 O
ATOM 2 P G B 42 -5.153 -4.370 7.245 1.00 37.23 P
ATOM 3 OP1 G B 42 -5.194 -4.010 8.677 1.00 37.78 O
ATOM 4 OP2 G B 42 -3.982 -5.083 6.699 1.00 36.64 O
ATOM 5 O5' G B 42 -6.469 -5.199 6.911 1.00 36.78 O
ATOM 6 C5' G B 42 -6.592 -5.840 5.674 1.00 35.64 C
ATOM 7 C4' G B 42 -6.623 -7.340 5.875 1.00 36.90 C
ATOM 8 O4' G B 42 -7.473 -7.693 6.999 1.00 37.92 O
ATOM 9 C3' G B 42 -7.220 -8.078 4.700 1.00 37.58 C
ATOM 10 O3' G B 42 -6.195 -8.321 3.767 1.00 36.69 O
ATOM 11 C2' G B 42 -7.728 -9.359 5.357 1.00 37.99 C
ATOM 12 O2' G B 42 -6.689 -10.278 5.624 1.00 36.56 O
ATOM 13 C1' G B 42 -8.289 -8.804 6.664 1.00 37.12 C
ATOM 14 N9 G B 42 -9.673 -8.342 6.557 1.00 37.15 N
ATOM 15 C8 G B 42 -10.108 -7.040 6.663 1.00 34.00 C
ATOM 16 N7 G B 42 -11.401 -6.914 6.530 1.00 35.16 N
ATOM 17 C5 G B 42 -11.853 -8.210 6.318 1.00 35.15 C
ATOM 18 C6 G B 42 -13.166 -8.688 6.110 1.00 39.16 C
ATOM 19 O6 G B 42 -14.213 -8.028 6.068 1.00 42.00 O
ATOM 20 N1 G B 42 -13.207 -10.075 5.933 1.00 37.82 N
ATOM 21 C2 G B 42 -12.100 -10.893 5.962 1.00 37.28 C
ATOM 22 N2 G B 42 -12.325 -12.202 5.773 1.00 34.67 N
ATOM 23 N3 G B 42 -10.859 -10.454 6.165 1.00 35.91 N
ATOM 24 C4 G B 42 -10.807 -9.106 6.332 1.00 34.52 C
ATOM 25 P C B 43 -6.452 -8.097 2.203 1.00 36.40 P
ATOM 26 OP1 C B 43 -5.192 -8.498 1.532 1.00 37.11 O
ATOM 27 OP2 C B 43 -7.017 -6.747 1.987 1.00 34.52 O
ATOM 28 O5' C B 43 -7.591 -9.163 1.854 1.00 35.07 O
TER

Atoms:
C4: (-17.850,-8.224,5.846)
N3: (-16.730,-9.009,5.617)
OP1: (-24.310,-12.818,5.112)
OP2: (-23.441,-10.439,5.557)
C2: (-16.700,-10.311,5.182)
C1': (-18.032,-12.305,4.461)
C3': (-19.297,-13.590,5.962)
O5': (-21.853,-12.271,5.081)
O4': (-19.312,-12.544,3.894)
C5': (-21.442,-13.530,4.548)
P: (-23.338,-11.730,4.837)
C4': (-19.931,-13.662,4.582)
C2': (-17.848,-13.346,5.566)
O2': (-17.226,-14.506,5.044)
N1: (-17.945,-10.877,4.947)
O4: (-17.705,-7.071,6.240)
O2: (-15.642,-10.896,5.017)
C6: (-19.111,-10.143,5.150)
C5: (-19.116,-8.871,5.582)
O3': (-19.489,-14.794,6.700)
OP1: (-5.194,-4.010,8.677)
OP2: (-3.982,-5.083,6.699)
C3': (-7.220,-8.078,4.700)
C1': (-8.289,-8.804,6.664)
C5': (-6.592,-5.840,5.674)
O6: (-14.213,-8.028,6.068)
O4': (-7.473,-7.693,6.999)
C8: (-10.108,-7.040,6.663)
C2: (-12.100,-10.893,5.962)
C6: (-13.166,-8.688,6.110)
C5: (-11.853,-8.210,6.318)
C4: (-10.807,-9.106,6.332)
P: (-5.153,-4.370,7.245)
C4': (-6.623,-7.340,5.875)
C2': (-7.728,-9.359,5.357)
O2': (-6.689,-10.278,5.624)
N1: (-13.207,-10.075,5.933)
N2: (-12.325,-12.202,5.773)
N3: (-10.859,-10.454,6.165)
N7: (-11.401,-6.914,6.530)
N9: (-9.673,-8.342,6.557)
O5': (-6.469,-5.199,6.911)
O3': (-6.195,-8.321,3.767)
Image (generated by PyMOL):
PyMOL image
show in jmol