Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIT:0482:0486
Extra
PDB:
ATOM 1 O3' U A 481 25.179 177.609 76.765 1.00 52.33 O
ATOM 2 P C A 482 26.367 178.681 76.880 1.00 54.21 P
ATOM 3 OP1 C A 482 26.431 179.128 78.294 1.00 53.61 O
ATOM 4 OP2 C A 482 26.189 179.684 75.798 1.00 54.78 O
ATOM 5 O5' C A 482 27.675 177.835 76.553 1.00 53.73 O
ATOM 6 C5' C A 482 28.055 176.737 77.386 1.00 54.79 C
ATOM 7 C4' C A 482 29.152 175.947 76.734 1.00 55.94 C
ATOM 8 O4' C A 482 28.657 175.315 75.527 1.00 56.34 O
ATOM 9 C3' C A 482 30.338 176.756 76.248 1.00 57.34 C
ATOM 10 O3' C A 482 31.215 177.093 77.321 1.00 58.78 O
ATOM 11 C2' C A 482 30.969 175.814 75.226 1.00 56.95 C
ATOM 12 O2' C A 482 31.773 174.809 75.807 1.00 58.45 O
ATOM 13 C1' C A 482 29.728 175.164 74.606 1.00 56.18 C
ATOM 14 N1 C A 482 29.339 175.751 73.310 1.00 55.55 N
ATOM 15 C2 C A 482 29.795 175.144 72.134 1.00 55.82 C
ATOM 16 O2 C A 482 30.495 174.123 72.210 1.00 55.67 O
ATOM 17 N3 C A 482 29.459 175.681 70.943 1.00 56.58 N
ATOM 18 C4 C A 482 28.695 176.771 70.893 1.00 54.90 C
ATOM 19 N4 C A 482 28.388 177.257 69.691 1.00 55.50 N
ATOM 20 C5 C A 482 28.213 177.407 72.071 1.00 54.21 C
ATOM 21 C6 C A 482 28.555 176.870 73.247 1.00 54.91 C
ATOM 22 P A A 483 31.884 178.554 77.373 1.00 59.72 P
ATOM 23 OP1 A A 483 32.536 178.736 78.693 1.00 59.56 O
ATOM 24 OP2 A A 483 30.854 179.527 76.922 1.00 60.60 O
ATOM 25 O5' A A 483 33.026 178.489 76.270 1.00 56.94 O
TER
ATOM 1 O3' A B 485 31.930 172.031 64.857 1.00 86.57 O
ATOM 2 P A B 486 31.720 171.010 66.086 1.00 83.47 P
ATOM 3 OP1 A B 486 31.100 169.785 65.504 1.00 84.17 O
ATOM 4 OP2 A B 486 31.010 171.748 67.164 1.00 83.24 O
ATOM 5 O5' A B 486 33.181 170.657 66.619 1.00 76.09 O
ATOM 6 C5' A B 486 33.890 169.486 66.160 1.00 66.01 C
ATOM 7 C4' A B 486 34.214 168.576 67.324 1.00 59.83 C
ATOM 8 O4' A B 486 34.653 169.387 68.444 1.00 57.75 O
ATOM 9 C3' A B 486 33.056 167.777 67.897 1.00 57.12 C
ATOM 10 O3' A B 486 32.861 166.571 67.175 1.00 54.77 O
ATOM 11 C2' A B 486 33.523 167.488 69.315 1.00 55.55 C
ATOM 12 O2' A B 486 34.442 166.418 69.375 1.00 53.76 O
ATOM 13 C1' A B 486 34.244 168.790 69.662 1.00 55.00 C
ATOM 14 N9 A B 486 33.421 169.748 70.399 1.00 52.96 N
ATOM 15 C8 A B 486 32.848 170.908 69.941 1.00 52.08 C
ATOM 16 N7 A B 486 32.187 171.570 70.859 1.00 52.47 N
ATOM 17 C5 A B 486 32.328 170.790 71.998 1.00 52.96 C
ATOM 18 C6 A B 486 31.869 170.950 73.319 1.00 53.15 C
ATOM 19 N6 A B 486 31.160 171.998 73.735 1.00 52.67 N
ATOM 20 N1 A B 486 32.178 169.985 74.213 1.00 54.59 N
ATOM 21 C2 A B 486 32.907 168.939 73.799 1.00 54.74 C
ATOM 22 N3 A B 486 33.405 168.683 72.589 1.00 53.57 N
ATOM 23 C4 A B 486 33.077 169.660 71.726 1.00 53.05 C
ATOM 24 P G B 487 31.402 165.905 67.118 1.00 52.88 P
ATOM 25 OP1 G B 487 31.585 164.535 66.582 1.00 51.98 O
ATOM 26 OP2 G B 487 30.489 166.848 66.427 1.00 53.63 O
ATOM 27 O5' G B 487 30.952 165.814 68.643 1.00 50.42 O
TER
ATOM 2 P C A 482 26.367 178.681 76.880 1.00 54.21 P
ATOM 3 OP1 C A 482 26.431 179.128 78.294 1.00 53.61 O
ATOM 4 OP2 C A 482 26.189 179.684 75.798 1.00 54.78 O
ATOM 5 O5' C A 482 27.675 177.835 76.553 1.00 53.73 O
ATOM 6 C5' C A 482 28.055 176.737 77.386 1.00 54.79 C
ATOM 7 C4' C A 482 29.152 175.947 76.734 1.00 55.94 C
ATOM 8 O4' C A 482 28.657 175.315 75.527 1.00 56.34 O
ATOM 9 C3' C A 482 30.338 176.756 76.248 1.00 57.34 C
ATOM 10 O3' C A 482 31.215 177.093 77.321 1.00 58.78 O
ATOM 11 C2' C A 482 30.969 175.814 75.226 1.00 56.95 C
ATOM 12 O2' C A 482 31.773 174.809 75.807 1.00 58.45 O
ATOM 13 C1' C A 482 29.728 175.164 74.606 1.00 56.18 C
ATOM 14 N1 C A 482 29.339 175.751 73.310 1.00 55.55 N
ATOM 15 C2 C A 482 29.795 175.144 72.134 1.00 55.82 C
ATOM 16 O2 C A 482 30.495 174.123 72.210 1.00 55.67 O
ATOM 17 N3 C A 482 29.459 175.681 70.943 1.00 56.58 N
ATOM 18 C4 C A 482 28.695 176.771 70.893 1.00 54.90 C
ATOM 19 N4 C A 482 28.388 177.257 69.691 1.00 55.50 N
ATOM 20 C5 C A 482 28.213 177.407 72.071 1.00 54.21 C
ATOM 21 C6 C A 482 28.555 176.870 73.247 1.00 54.91 C
ATOM 22 P A A 483 31.884 178.554 77.373 1.00 59.72 P
ATOM 23 OP1 A A 483 32.536 178.736 78.693 1.00 59.56 O
ATOM 24 OP2 A A 483 30.854 179.527 76.922 1.00 60.60 O
ATOM 25 O5' A A 483 33.026 178.489 76.270 1.00 56.94 O
TER
ATOM 1 O3' A B 485 31.930 172.031 64.857 1.00 86.57 O
ATOM 2 P A B 486 31.720 171.010 66.086 1.00 83.47 P
ATOM 3 OP1 A B 486 31.100 169.785 65.504 1.00 84.17 O
ATOM 4 OP2 A B 486 31.010 171.748 67.164 1.00 83.24 O
ATOM 5 O5' A B 486 33.181 170.657 66.619 1.00 76.09 O
ATOM 6 C5' A B 486 33.890 169.486 66.160 1.00 66.01 C
ATOM 7 C4' A B 486 34.214 168.576 67.324 1.00 59.83 C
ATOM 8 O4' A B 486 34.653 169.387 68.444 1.00 57.75 O
ATOM 9 C3' A B 486 33.056 167.777 67.897 1.00 57.12 C
ATOM 10 O3' A B 486 32.861 166.571 67.175 1.00 54.77 O
ATOM 11 C2' A B 486 33.523 167.488 69.315 1.00 55.55 C
ATOM 12 O2' A B 486 34.442 166.418 69.375 1.00 53.76 O
ATOM 13 C1' A B 486 34.244 168.790 69.662 1.00 55.00 C
ATOM 14 N9 A B 486 33.421 169.748 70.399 1.00 52.96 N
ATOM 15 C8 A B 486 32.848 170.908 69.941 1.00 52.08 C
ATOM 16 N7 A B 486 32.187 171.570 70.859 1.00 52.47 N
ATOM 17 C5 A B 486 32.328 170.790 71.998 1.00 52.96 C
ATOM 18 C6 A B 486 31.869 170.950 73.319 1.00 53.15 C
ATOM 19 N6 A B 486 31.160 171.998 73.735 1.00 52.67 N
ATOM 20 N1 A B 486 32.178 169.985 74.213 1.00 54.59 N
ATOM 21 C2 A B 486 32.907 168.939 73.799 1.00 54.74 C
ATOM 22 N3 A B 486 33.405 168.683 72.589 1.00 53.57 N
ATOM 23 C4 A B 486 33.077 169.660 71.726 1.00 53.05 C
ATOM 24 P G B 487 31.402 165.905 67.118 1.00 52.88 P
ATOM 25 OP1 G B 487 31.585 164.535 66.582 1.00 51.98 O
ATOM 26 OP2 G B 487 30.489 166.848 66.427 1.00 53.63 O
ATOM 27 O5' G B 487 30.952 165.814 68.643 1.00 50.42 O
TER
Atoms:
C2: (29.795,175.144,72.134)
OP1: (26.431,179.128,78.294)
OP2: (26.189,179.684,75.798)
C4: (28.695,176.771,70.893)
O5': (27.675,177.835,76.553)
C3': (30.338,176.756,76.248)
C1': (29.728,175.164,74.606)
O4': (28.657,175.315,75.527)
C5': (28.055,176.737,77.386)
P: (26.367,178.681,76.880)
O2: (30.495,174.123,72.210)
C4': (29.152,175.947,76.734)
C2': (30.969,175.814,75.226)
O2': (31.773,174.809,75.807)
N1: (29.339,175.751,73.310)
N3: (29.459,175.681,70.943)
N4: (28.388,177.257,69.691)
C6: (28.555,176.870,73.247)
C5: (28.213,177.407,72.071)
O3': (31.215,177.093,77.321)
OP1: (26.431,179.128,78.294)
OP2: (26.189,179.684,75.798)
C4: (28.695,176.771,70.893)
O5': (27.675,177.835,76.553)
C3': (30.338,176.756,76.248)
C1': (29.728,175.164,74.606)
O4': (28.657,175.315,75.527)
C5': (28.055,176.737,77.386)
P: (26.367,178.681,76.880)
O2: (30.495,174.123,72.210)
C4': (29.152,175.947,76.734)
C2': (30.969,175.814,75.226)
O2': (31.773,174.809,75.807)
N1: (29.339,175.751,73.310)
N3: (29.459,175.681,70.943)
N4: (28.388,177.257,69.691)
C6: (28.555,176.870,73.247)
C5: (28.213,177.407,72.071)
O3': (31.215,177.093,77.321)
OP1: (31.100,169.785,65.504)
OP2: (31.010,171.748,67.164)
C3': (33.056,167.777,67.897)
C1': (34.244,168.790,69.662)
C5': (33.890,169.486,66.160)
O4': (34.653,169.387,68.444)
C8: (32.848,170.908,69.941)
O2': (34.442,166.418,69.375)
C6: (31.869,170.950,73.319)
C5: (32.328,170.790,71.998)
C4: (33.077,169.660,71.726)
P: (31.720,171.010,66.086)
C4': (34.214,168.576,67.324)
C2': (33.523,167.488,69.315)
C2: (32.907,168.939,73.799)
N1: (32.178,169.985,74.213)
N3: (33.405,168.683,72.589)
N6: (31.160,171.998,73.735)
N7: (32.187,171.570,70.859)
N9: (33.421,169.748,70.399)
O5': (33.181,170.657,66.619)
O3': (32.861,166.571,67.175)
OP2: (31.010,171.748,67.164)
C3': (33.056,167.777,67.897)
C1': (34.244,168.790,69.662)
C5': (33.890,169.486,66.160)
O4': (34.653,169.387,68.444)
C8: (32.848,170.908,69.941)
O2': (34.442,166.418,69.375)
C6: (31.869,170.950,73.319)
C5: (32.328,170.790,71.998)
C4: (33.077,169.660,71.726)
P: (31.720,171.010,66.086)
C4': (34.214,168.576,67.324)
C2': (33.523,167.488,69.315)
C2: (32.907,168.939,73.799)
N1: (32.178,169.985,74.213)
N3: (33.405,168.683,72.589)
N6: (31.160,171.998,73.735)
N7: (32.187,171.570,70.859)
N9: (33.421,169.748,70.399)
O5': (33.181,170.657,66.619)
O3': (32.861,166.571,67.175)
Image (generated by PyMOL):