Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:01025:01007
Extra
PDB:
ATOM 1 O3' G A1024 44.207 80.078 96.375 1.00 42.84 O
ATOM 2 P U A1025 43.416 81.084 95.398 1.00 45.54 P
ATOM 3 OP1 U A1025 42.551 80.235 94.558 1.00 44.93 O
ATOM 4 OP2 U A1025 44.356 82.029 94.749 1.00 42.67 O
ATOM 5 O5' U A1025 42.476 81.903 96.391 1.00 45.82 O
ATOM 6 C5' U A1025 41.466 81.224 97.161 1.00 46.71 C
ATOM 7 C4' U A1025 40.936 82.118 98.251 1.00 46.18 C
ATOM 8 O4' U A1025 42.014 82.461 99.161 1.00 45.54 O
ATOM 9 C3' U A1025 40.373 83.456 97.806 1.00 45.46 C
ATOM 10 O3' U A1025 39.026 83.317 97.359 1.00 47.87 O
ATOM 11 C2' U A1025 40.484 84.270 99.089 1.00 45.93 C
ATOM 12 O2' U A1025 39.488 83.953 100.035 1.00 43.92 O
ATOM 13 C1' U A1025 41.832 83.786 99.634 1.00 46.18 C
ATOM 14 N1 U A1025 42.954 84.617 99.161 1.00 46.85 N
ATOM 15 C2 U A1025 43.151 85.838 99.769 1.00 46.87 C
ATOM 16 O2 U A1025 42.467 86.240 100.693 1.00 47.74 O
ATOM 17 N3 U A1025 44.182 86.579 99.253 1.00 47.10 N
ATOM 18 C4 U A1025 45.022 86.229 98.224 1.00 46.65 C
ATOM 19 O4 U A1025 45.921 87.000 97.885 1.00 46.78 O
ATOM 20 C5 U A1025 44.766 84.951 97.661 1.00 46.46 C
ATOM 21 C6 U A1025 43.770 84.206 98.136 1.00 47.30 C
ATOM 22 P A A1026 38.469 84.220 96.135 1.00 50.28 P
ATOM 23 OP1 A A1026 37.357 83.437 95.534 1.00 48.27 O
ATOM 24 OP2 A A1026 39.594 84.679 95.267 1.00 48.63 O
ATOM 25 O5' A A1026 37.819 85.496 96.841 1.00 46.00 O
TER
ATOM 1 O3' U B1006 46.455 96.329 104.912 1.00 36.35 O
ATOM 2 P G B1007 46.953 95.211 105.939 1.00 36.90 P
ATOM 3 OP1 G B1007 47.261 95.950 107.188 1.00 38.49 O
ATOM 4 OP2 G B1007 47.999 94.372 105.306 1.00 38.94 O
ATOM 5 O5' G B1007 45.655 94.324 106.186 1.00 37.93 O
ATOM 6 C5' G B1007 44.508 94.903 106.836 1.00 39.31 C
ATOM 7 C4' G B1007 43.343 93.945 106.834 1.00 40.23 C
ATOM 8 O4' G B1007 42.830 93.745 105.490 1.00 42.04 O
ATOM 9 C3' G B1007 43.626 92.538 107.311 1.00 38.99 C
ATOM 10 O3' G B1007 43.701 92.489 108.715 1.00 38.28 O
ATOM 11 C2' G B1007 42.424 91.790 106.755 1.00 39.71 C
ATOM 12 O2' G B1007 41.239 92.095 107.457 1.00 39.28 O
ATOM 13 C1' G B1007 42.317 92.427 105.374 1.00 39.06 C
ATOM 14 N9 G B1007 43.124 91.713 104.393 1.00 38.47 N
ATOM 15 C8 G B1007 44.362 92.061 103.908 1.00 37.90 C
ATOM 16 N7 G B1007 44.814 91.224 103.011 1.00 35.90 N
ATOM 17 C5 G B1007 43.819 90.268 102.908 1.00 34.94 C
ATOM 18 C6 G B1007 43.738 89.139 102.094 1.00 34.93 C
ATOM 19 O6 G B1007 44.552 88.731 101.269 1.00 36.07 O
ATOM 20 N1 G B1007 42.555 88.449 102.301 1.00 35.81 N
ATOM 21 C2 G B1007 41.571 88.811 103.184 1.00 35.39 C
ATOM 22 N2 G B1007 40.506 88.014 103.234 1.00 38.90 N
ATOM 23 N3 G B1007 41.631 89.870 103.954 1.00 34.08 N
ATOM 24 C4 G B1007 42.774 90.551 103.764 1.00 36.87 C
ATOM 25 P C B1008 44.716 91.467 109.409 1.00 38.28 P
ATOM 26 OP1 C B1008 44.701 91.745 110.867 1.00 38.01 O
ATOM 27 OP2 C B1008 45.994 91.491 108.659 1.00 40.88 O
ATOM 28 O5' C B1008 44.068 90.049 109.140 1.00 37.15 O
TER
ATOM 2 P U A1025 43.416 81.084 95.398 1.00 45.54 P
ATOM 3 OP1 U A1025 42.551 80.235 94.558 1.00 44.93 O
ATOM 4 OP2 U A1025 44.356 82.029 94.749 1.00 42.67 O
ATOM 5 O5' U A1025 42.476 81.903 96.391 1.00 45.82 O
ATOM 6 C5' U A1025 41.466 81.224 97.161 1.00 46.71 C
ATOM 7 C4' U A1025 40.936 82.118 98.251 1.00 46.18 C
ATOM 8 O4' U A1025 42.014 82.461 99.161 1.00 45.54 O
ATOM 9 C3' U A1025 40.373 83.456 97.806 1.00 45.46 C
ATOM 10 O3' U A1025 39.026 83.317 97.359 1.00 47.87 O
ATOM 11 C2' U A1025 40.484 84.270 99.089 1.00 45.93 C
ATOM 12 O2' U A1025 39.488 83.953 100.035 1.00 43.92 O
ATOM 13 C1' U A1025 41.832 83.786 99.634 1.00 46.18 C
ATOM 14 N1 U A1025 42.954 84.617 99.161 1.00 46.85 N
ATOM 15 C2 U A1025 43.151 85.838 99.769 1.00 46.87 C
ATOM 16 O2 U A1025 42.467 86.240 100.693 1.00 47.74 O
ATOM 17 N3 U A1025 44.182 86.579 99.253 1.00 47.10 N
ATOM 18 C4 U A1025 45.022 86.229 98.224 1.00 46.65 C
ATOM 19 O4 U A1025 45.921 87.000 97.885 1.00 46.78 O
ATOM 20 C5 U A1025 44.766 84.951 97.661 1.00 46.46 C
ATOM 21 C6 U A1025 43.770 84.206 98.136 1.00 47.30 C
ATOM 22 P A A1026 38.469 84.220 96.135 1.00 50.28 P
ATOM 23 OP1 A A1026 37.357 83.437 95.534 1.00 48.27 O
ATOM 24 OP2 A A1026 39.594 84.679 95.267 1.00 48.63 O
ATOM 25 O5' A A1026 37.819 85.496 96.841 1.00 46.00 O
TER
ATOM 1 O3' U B1006 46.455 96.329 104.912 1.00 36.35 O
ATOM 2 P G B1007 46.953 95.211 105.939 1.00 36.90 P
ATOM 3 OP1 G B1007 47.261 95.950 107.188 1.00 38.49 O
ATOM 4 OP2 G B1007 47.999 94.372 105.306 1.00 38.94 O
ATOM 5 O5' G B1007 45.655 94.324 106.186 1.00 37.93 O
ATOM 6 C5' G B1007 44.508 94.903 106.836 1.00 39.31 C
ATOM 7 C4' G B1007 43.343 93.945 106.834 1.00 40.23 C
ATOM 8 O4' G B1007 42.830 93.745 105.490 1.00 42.04 O
ATOM 9 C3' G B1007 43.626 92.538 107.311 1.00 38.99 C
ATOM 10 O3' G B1007 43.701 92.489 108.715 1.00 38.28 O
ATOM 11 C2' G B1007 42.424 91.790 106.755 1.00 39.71 C
ATOM 12 O2' G B1007 41.239 92.095 107.457 1.00 39.28 O
ATOM 13 C1' G B1007 42.317 92.427 105.374 1.00 39.06 C
ATOM 14 N9 G B1007 43.124 91.713 104.393 1.00 38.47 N
ATOM 15 C8 G B1007 44.362 92.061 103.908 1.00 37.90 C
ATOM 16 N7 G B1007 44.814 91.224 103.011 1.00 35.90 N
ATOM 17 C5 G B1007 43.819 90.268 102.908 1.00 34.94 C
ATOM 18 C6 G B1007 43.738 89.139 102.094 1.00 34.93 C
ATOM 19 O6 G B1007 44.552 88.731 101.269 1.00 36.07 O
ATOM 20 N1 G B1007 42.555 88.449 102.301 1.00 35.81 N
ATOM 21 C2 G B1007 41.571 88.811 103.184 1.00 35.39 C
ATOM 22 N2 G B1007 40.506 88.014 103.234 1.00 38.90 N
ATOM 23 N3 G B1007 41.631 89.870 103.954 1.00 34.08 N
ATOM 24 C4 G B1007 42.774 90.551 103.764 1.00 36.87 C
ATOM 25 P C B1008 44.716 91.467 109.409 1.00 38.28 P
ATOM 26 OP1 C B1008 44.701 91.745 110.867 1.00 38.01 O
ATOM 27 OP2 C B1008 45.994 91.491 108.659 1.00 40.88 O
ATOM 28 O5' C B1008 44.068 90.049 109.140 1.00 37.15 O
TER
Atoms:
C4: (45.022,86.229,98.224)
N3: (44.182,86.579,99.253)
OP1: (42.551,80.235,94.558)
OP2: (44.356,82.029,94.749)
C2: (43.151,85.838,99.769)
C1': (41.832,83.786,99.634)
C3': (40.373,83.456,97.806)
O5': (42.476,81.903,96.391)
O4': (42.014,82.461,99.161)
C5': (41.466,81.224,97.161)
P: (43.416,81.084,95.398)
C4': (40.936,82.118,98.251)
C2': (40.484,84.270,99.089)
O2': (39.488,83.953,100.035)
N1: (42.954,84.617,99.161)
O4: (45.921,87.000,97.885)
O2: (42.467,86.240,100.693)
C6: (43.770,84.206,98.136)
C5: (44.766,84.951,97.661)
O3': (39.026,83.317,97.359)
N3: (44.182,86.579,99.253)
OP1: (42.551,80.235,94.558)
OP2: (44.356,82.029,94.749)
C2: (43.151,85.838,99.769)
C1': (41.832,83.786,99.634)
C3': (40.373,83.456,97.806)
O5': (42.476,81.903,96.391)
O4': (42.014,82.461,99.161)
C5': (41.466,81.224,97.161)
P: (43.416,81.084,95.398)
C4': (40.936,82.118,98.251)
C2': (40.484,84.270,99.089)
O2': (39.488,83.953,100.035)
N1: (42.954,84.617,99.161)
O4: (45.921,87.000,97.885)
O2: (42.467,86.240,100.693)
C6: (43.770,84.206,98.136)
C5: (44.766,84.951,97.661)
O3': (39.026,83.317,97.359)
OP1: (47.261,95.950,107.188)
OP2: (47.999,94.372,105.306)
C3': (43.626,92.538,107.311)
C1': (42.317,92.427,105.374)
C5': (44.508,94.903,106.836)
O6: (44.552,88.731,101.269)
O4': (42.830,93.745,105.490)
C8: (44.362,92.061,103.908)
C2: (41.571,88.811,103.184)
C6: (43.738,89.139,102.094)
C5: (43.819,90.268,102.908)
C4: (42.774,90.551,103.764)
P: (46.953,95.211,105.939)
C4': (43.343,93.945,106.834)
C2': (42.424,91.790,106.755)
O2': (41.239,92.095,107.457)
N1: (42.555,88.449,102.301)
N2: (40.506,88.014,103.234)
N3: (41.631,89.870,103.954)
N7: (44.814,91.224,103.011)
N9: (43.124,91.713,104.393)
O5': (45.655,94.324,106.186)
O3': (43.701,92.489,108.715)
OP2: (47.999,94.372,105.306)
C3': (43.626,92.538,107.311)
C1': (42.317,92.427,105.374)
C5': (44.508,94.903,106.836)
O6: (44.552,88.731,101.269)
O4': (42.830,93.745,105.490)
C8: (44.362,92.061,103.908)
C2: (41.571,88.811,103.184)
C6: (43.738,89.139,102.094)
C5: (43.819,90.268,102.908)
C4: (42.774,90.551,103.764)
P: (46.953,95.211,105.939)
C4': (43.343,93.945,106.834)
C2': (42.424,91.790,106.755)
O2': (41.239,92.095,107.457)
N1: (42.555,88.449,102.301)
N2: (40.506,88.014,103.234)
N3: (41.631,89.870,103.954)
N7: (44.814,91.224,103.011)
N9: (43.124,91.713,104.393)
O5': (45.655,94.324,106.186)
O3': (43.701,92.489,108.715)
Image (generated by PyMOL):