Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A2005:A525
Extra
PDB:
ATOM 1 O3' G A2004 43.468 130.806 90.493 1.00 33.68 O
ATOM 2 P U A2005 44.241 129.523 89.942 1.00 35.45 P
ATOM 3 OP1 U A2005 45.092 129.014 91.048 1.00 34.89 O
ATOM 4 OP2 U A2005 44.868 129.926 88.645 1.00 32.84 O
ATOM 5 O5' U A2005 43.092 128.439 89.737 1.00 33.61 O
ATOM 6 C5' U A2005 42.387 128.308 88.488 1.00 32.18 C
ATOM 7 C4' U A2005 41.031 127.661 88.708 1.00 31.19 C
ATOM 8 O4' U A2005 41.144 126.267 89.106 1.00 28.82 O
ATOM 9 C3' U A2005 40.123 128.280 89.763 1.00 29.62 C
ATOM 10 O3' U A2005 39.425 129.446 89.318 1.00 29.29 O
ATOM 11 C2' U A2005 39.156 127.147 90.058 1.00 28.67 C
ATOM 12 O2' U A2005 38.176 127.030 89.057 1.00 30.36 O
ATOM 13 C1' U A2005 40.055 125.930 89.936 1.00 29.91 C
ATOM 14 N1 U A2005 40.572 125.543 91.247 1.00 32.36 N
ATOM 15 C2 U A2005 39.755 124.804 92.095 1.00 34.18 C
ATOM 16 O2 U A2005 38.593 124.528 91.845 1.00 33.29 O
ATOM 17 N3 U A2005 40.363 124.425 93.267 1.00 34.74 N
ATOM 18 C4 U A2005 41.648 124.732 93.674 1.00 35.24 C
ATOM 19 O4 U A2005 42.049 124.334 94.763 1.00 37.89 O
ATOM 20 C5 U A2005 42.386 125.525 92.771 1.00 33.68 C
ATOM 21 C6 U A2005 41.844 125.894 91.622 1.00 32.81 C
ATOM 22 P A A2006 39.054 130.592 90.375 1.00 29.48 P
ATOM 23 OP1 A A2006 38.606 131.796 89.652 1.00 30.18 O
ATOM 24 OP2 A A2006 40.201 130.688 91.311 1.00 31.99 O
ATOM 25 O5' A A2006 37.826 130.004 91.204 1.00 30.05 O
TER
ATOM 1 O3' A B 524 31.069 125.311 100.948 1.00 40.38 O
ATOM 2 P G B 525 30.338 123.884 100.758 1.00 43.03 P
ATOM 3 OP1 G B 525 29.221 124.150 99.830 1.00 44.48 O
ATOM 4 OP2 G B 525 30.065 123.149 102.023 1.00 41.33 O
ATOM 5 O5' G B 525 31.397 123.035 99.925 1.00 41.31 O
ATOM 6 C5' G B 525 30.985 121.877 99.168 1.00 36.51 C
ATOM 7 C4' G B 525 31.097 122.166 97.694 1.00 33.64 C
ATOM 8 O4' G B 525 32.432 122.634 97.402 1.00 32.26 O
ATOM 9 C3' G B 525 30.846 121.010 96.733 1.00 31.84 C
ATOM 10 O3' G B 525 30.253 121.561 95.554 1.00 31.34 O
ATOM 11 C2' G B 525 32.263 120.595 96.356 1.00 30.05 C
ATOM 12 O2' G B 525 32.246 119.922 95.121 1.00 28.58 O
ATOM 13 C1' G B 525 32.909 121.974 96.262 1.00 31.06 C
ATOM 14 N9 G B 525 34.358 122.108 96.236 1.00 32.24 N
ATOM 15 C8 G B 525 35.237 121.758 97.223 1.00 35.02 C
ATOM 16 N7 G B 525 36.478 121.998 96.912 1.00 35.36 N
ATOM 17 C5 G B 525 36.411 122.545 95.644 1.00 33.77 C
ATOM 18 C6 G B 525 37.442 122.997 94.788 1.00 34.79 C
ATOM 19 O6 G B 525 38.655 123.007 94.990 1.00 34.24 O
ATOM 20 N1 G B 525 36.937 123.475 93.583 1.00 35.57 N
ATOM 21 C2 G B 525 35.606 123.520 93.250 1.00 35.01 C
ATOM 22 N2 G B 525 35.314 124.035 92.036 1.00 35.24 N
ATOM 23 N3 G B 525 34.635 123.097 94.046 1.00 33.69 N
ATOM 24 C4 G B 525 35.108 122.624 95.216 1.00 32.34 C
ATOM 25 P C B 526 28.681 121.836 95.490 1.00 28.74 P
ATOM 26 OP1 C B 526 28.057 120.782 96.300 1.00 29.57 O
ATOM 27 OP2 C B 526 28.359 121.952 94.060 1.00 30.03 O
ATOM 28 O5' C B 526 28.521 123.275 96.137 1.00 27.35 O
TER
ATOM 2 P U A2005 44.241 129.523 89.942 1.00 35.45 P
ATOM 3 OP1 U A2005 45.092 129.014 91.048 1.00 34.89 O
ATOM 4 OP2 U A2005 44.868 129.926 88.645 1.00 32.84 O
ATOM 5 O5' U A2005 43.092 128.439 89.737 1.00 33.61 O
ATOM 6 C5' U A2005 42.387 128.308 88.488 1.00 32.18 C
ATOM 7 C4' U A2005 41.031 127.661 88.708 1.00 31.19 C
ATOM 8 O4' U A2005 41.144 126.267 89.106 1.00 28.82 O
ATOM 9 C3' U A2005 40.123 128.280 89.763 1.00 29.62 C
ATOM 10 O3' U A2005 39.425 129.446 89.318 1.00 29.29 O
ATOM 11 C2' U A2005 39.156 127.147 90.058 1.00 28.67 C
ATOM 12 O2' U A2005 38.176 127.030 89.057 1.00 30.36 O
ATOM 13 C1' U A2005 40.055 125.930 89.936 1.00 29.91 C
ATOM 14 N1 U A2005 40.572 125.543 91.247 1.00 32.36 N
ATOM 15 C2 U A2005 39.755 124.804 92.095 1.00 34.18 C
ATOM 16 O2 U A2005 38.593 124.528 91.845 1.00 33.29 O
ATOM 17 N3 U A2005 40.363 124.425 93.267 1.00 34.74 N
ATOM 18 C4 U A2005 41.648 124.732 93.674 1.00 35.24 C
ATOM 19 O4 U A2005 42.049 124.334 94.763 1.00 37.89 O
ATOM 20 C5 U A2005 42.386 125.525 92.771 1.00 33.68 C
ATOM 21 C6 U A2005 41.844 125.894 91.622 1.00 32.81 C
ATOM 22 P A A2006 39.054 130.592 90.375 1.00 29.48 P
ATOM 23 OP1 A A2006 38.606 131.796 89.652 1.00 30.18 O
ATOM 24 OP2 A A2006 40.201 130.688 91.311 1.00 31.99 O
ATOM 25 O5' A A2006 37.826 130.004 91.204 1.00 30.05 O
TER
ATOM 1 O3' A B 524 31.069 125.311 100.948 1.00 40.38 O
ATOM 2 P G B 525 30.338 123.884 100.758 1.00 43.03 P
ATOM 3 OP1 G B 525 29.221 124.150 99.830 1.00 44.48 O
ATOM 4 OP2 G B 525 30.065 123.149 102.023 1.00 41.33 O
ATOM 5 O5' G B 525 31.397 123.035 99.925 1.00 41.31 O
ATOM 6 C5' G B 525 30.985 121.877 99.168 1.00 36.51 C
ATOM 7 C4' G B 525 31.097 122.166 97.694 1.00 33.64 C
ATOM 8 O4' G B 525 32.432 122.634 97.402 1.00 32.26 O
ATOM 9 C3' G B 525 30.846 121.010 96.733 1.00 31.84 C
ATOM 10 O3' G B 525 30.253 121.561 95.554 1.00 31.34 O
ATOM 11 C2' G B 525 32.263 120.595 96.356 1.00 30.05 C
ATOM 12 O2' G B 525 32.246 119.922 95.121 1.00 28.58 O
ATOM 13 C1' G B 525 32.909 121.974 96.262 1.00 31.06 C
ATOM 14 N9 G B 525 34.358 122.108 96.236 1.00 32.24 N
ATOM 15 C8 G B 525 35.237 121.758 97.223 1.00 35.02 C
ATOM 16 N7 G B 525 36.478 121.998 96.912 1.00 35.36 N
ATOM 17 C5 G B 525 36.411 122.545 95.644 1.00 33.77 C
ATOM 18 C6 G B 525 37.442 122.997 94.788 1.00 34.79 C
ATOM 19 O6 G B 525 38.655 123.007 94.990 1.00 34.24 O
ATOM 20 N1 G B 525 36.937 123.475 93.583 1.00 35.57 N
ATOM 21 C2 G B 525 35.606 123.520 93.250 1.00 35.01 C
ATOM 22 N2 G B 525 35.314 124.035 92.036 1.00 35.24 N
ATOM 23 N3 G B 525 34.635 123.097 94.046 1.00 33.69 N
ATOM 24 C4 G B 525 35.108 122.624 95.216 1.00 32.34 C
ATOM 25 P C B 526 28.681 121.836 95.490 1.00 28.74 P
ATOM 26 OP1 C B 526 28.057 120.782 96.300 1.00 29.57 O
ATOM 27 OP2 C B 526 28.359 121.952 94.060 1.00 30.03 O
ATOM 28 O5' C B 526 28.521 123.275 96.137 1.00 27.35 O
TER
Atoms:
C4: (41.648,124.732,93.674)
N3: (40.363,124.425,93.267)
OP1: (45.092,129.014,91.048)
OP2: (44.868,129.926,88.645)
C2: (39.755,124.804,92.095)
C1': (40.055,125.930,89.936)
C3': (40.123,128.280,89.763)
O5': (43.092,128.439,89.737)
O4': (41.144,126.267,89.106)
C5': (42.387,128.308,88.488)
P: (44.241,129.523,89.942)
C4': (41.031,127.661,88.708)
C2': (39.156,127.147,90.058)
O2': (38.176,127.030,89.057)
N1: (40.572,125.543,91.247)
O4: (42.049,124.334,94.763)
O2: (38.593,124.528,91.845)
C6: (41.844,125.894,91.622)
C5: (42.386,125.525,92.771)
O3': (39.425,129.446,89.318)
N3: (40.363,124.425,93.267)
OP1: (45.092,129.014,91.048)
OP2: (44.868,129.926,88.645)
C2: (39.755,124.804,92.095)
C1': (40.055,125.930,89.936)
C3': (40.123,128.280,89.763)
O5': (43.092,128.439,89.737)
O4': (41.144,126.267,89.106)
C5': (42.387,128.308,88.488)
P: (44.241,129.523,89.942)
C4': (41.031,127.661,88.708)
C2': (39.156,127.147,90.058)
O2': (38.176,127.030,89.057)
N1: (40.572,125.543,91.247)
O4: (42.049,124.334,94.763)
O2: (38.593,124.528,91.845)
C6: (41.844,125.894,91.622)
C5: (42.386,125.525,92.771)
O3': (39.425,129.446,89.318)
OP1: (29.221,124.150,99.830)
OP2: (30.065,123.149,102.023)
C3': (30.846,121.010,96.733)
C1': (32.909,121.974,96.262)
C5': (30.985,121.877,99.168)
O6: (38.655,123.007,94.990)
O4': (32.432,122.634,97.402)
C8: (35.237,121.758,97.223)
C2: (35.606,123.520,93.250)
C6: (37.442,122.997,94.788)
C5: (36.411,122.545,95.644)
C4: (35.108,122.624,95.216)
P: (30.338,123.884,100.758)
C4': (31.097,122.166,97.694)
C2': (32.263,120.595,96.356)
O2': (32.246,119.922,95.121)
N1: (36.937,123.475,93.583)
N2: (35.314,124.035,92.036)
N3: (34.635,123.097,94.046)
N7: (36.478,121.998,96.912)
N9: (34.358,122.108,96.236)
O5': (31.397,123.035,99.925)
O3': (30.253,121.561,95.554)
OP2: (30.065,123.149,102.023)
C3': (30.846,121.010,96.733)
C1': (32.909,121.974,96.262)
C5': (30.985,121.877,99.168)
O6: (38.655,123.007,94.990)
O4': (32.432,122.634,97.402)
C8: (35.237,121.758,97.223)
C2: (35.606,123.520,93.250)
C6: (37.442,122.997,94.788)
C5: (36.411,122.545,95.644)
C4: (35.108,122.624,95.216)
P: (30.338,123.884,100.758)
C4': (31.097,122.166,97.694)
C2': (32.263,120.595,96.356)
O2': (32.246,119.922,95.121)
N1: (36.937,123.475,93.583)
N2: (35.314,124.035,92.036)
N3: (34.635,123.097,94.046)
N7: (36.478,121.998,96.912)
N9: (34.358,122.108,96.236)
O5': (31.397,123.035,99.925)
O3': (30.253,121.561,95.554)
Image (generated by PyMOL):