Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJ9:0482:0486
Extra
PDB:
ATOM 1 O3' U A 481 24.997 178.319 77.110 1.00 75.91 O
ATOM 2 P C A 482 26.350 179.183 77.255 1.00 79.24 P
ATOM 3 OP1 C A 482 26.530 179.506 78.699 1.00 79.99 O
ATOM 4 OP2 C A 482 26.311 180.286 76.257 1.00 79.83 O
ATOM 5 O5' C A 482 27.510 178.178 76.823 1.00 78.25 O
ATOM 6 C5' C A 482 27.923 177.108 77.688 1.00 77.27 C
ATOM 7 C4' C A 482 29.048 176.328 77.054 1.00 77.21 C
ATOM 8 O4' C A 482 28.574 175.668 75.850 1.00 76.33 O
ATOM 9 C3' C A 482 30.244 177.139 76.578 1.00 77.58 C
ATOM 10 O3' C A 482 31.132 177.470 77.648 1.00 78.13 O
ATOM 11 C2' C A 482 30.882 176.196 75.563 1.00 77.50 C
ATOM 12 O2' C A 482 31.669 175.184 76.160 1.00 79.64 O
ATOM 13 C1' C A 482 29.645 175.560 74.920 1.00 76.82 C
ATOM 14 N1 C A 482 29.250 176.203 73.651 1.00 76.44 N
ATOM 15 C2 C A 482 29.723 175.666 72.445 1.00 76.47 C
ATOM 16 O2 C A 482 30.462 174.671 72.472 1.00 77.30 O
ATOM 17 N3 C A 482 29.366 176.247 71.281 1.00 76.74 N
ATOM 18 C4 C A 482 28.577 177.321 71.286 1.00 75.57 C
ATOM 19 N4 C A 482 28.251 177.857 70.110 1.00 74.93 N
ATOM 20 C5 C A 482 28.088 177.892 72.494 1.00 75.35 C
ATOM 21 C6 C A 482 28.443 177.307 73.642 1.00 75.84 C
ATOM 22 P A A 483 31.755 178.952 77.742 1.00 77.56 P
ATOM 23 OP1 A A 483 32.555 179.063 78.989 1.00 77.17 O
ATOM 24 OP2 A A 483 30.641 179.905 77.497 1.00 77.79 O
ATOM 25 O5' A A 483 32.766 179.035 76.517 1.00 76.72 O
TER
ATOM 1 O3' A B 485 31.955 171.991 64.869 1.00 98.50 O
ATOM 2 P A B 486 31.624 171.605 66.393 1.00 95.17 P
ATOM 3 OP1 A B 486 30.692 170.444 66.356 1.00 95.26 O
ATOM 4 OP2 A B 486 31.220 172.846 67.101 1.00 94.70 O
ATOM 5 O5' A B 486 33.016 171.125 67.009 1.00 90.39 O
ATOM 6 C5' A B 486 33.761 170.021 66.447 1.00 82.28 C
ATOM 7 C4' A B 486 34.212 169.087 67.550 1.00 76.86 C
ATOM 8 O4' A B 486 34.711 169.887 68.657 1.00 75.26 O
ATOM 9 C3' A B 486 33.109 168.250 68.178 1.00 74.12 C
ATOM 10 O3' A B 486 32.884 167.050 67.452 1.00 70.35 O
ATOM 11 C2' A B 486 33.649 167.968 69.573 1.00 73.31 C
ATOM 12 O2' A B 486 34.593 166.917 69.613 1.00 71.57 O
ATOM 13 C1' A B 486 34.341 169.291 69.892 1.00 72.39 C
ATOM 14 N9 A B 486 33.481 170.224 70.617 1.00 69.44 N
ATOM 15 C8 A B 486 32.923 171.390 70.159 1.00 69.70 C
ATOM 16 N7 A B 486 32.209 172.023 71.056 1.00 69.80 N
ATOM 17 C5 A B 486 32.298 171.218 72.180 1.00 68.67 C
ATOM 18 C6 A B 486 31.765 171.340 73.468 1.00 68.02 C
ATOM 19 N6 A B 486 31.018 172.366 73.859 1.00 68.37 N
ATOM 20 N1 A B 486 32.036 170.362 74.356 1.00 68.91 N
ATOM 21 C2 A B 486 32.802 169.337 73.964 1.00 68.89 C
ATOM 22 N3 A B 486 33.366 169.111 72.781 1.00 68.63 N
ATOM 23 C4 A B 486 33.073 170.103 71.923 1.00 69.10 C
ATOM 24 P G B 487 31.407 166.433 67.380 1.00 66.66 P
ATOM 25 OP1 G B 487 31.546 165.060 66.836 1.00 65.55 O
ATOM 26 OP2 G B 487 30.550 167.422 66.683 1.00 68.45 O
ATOM 27 O5' G B 487 30.923 166.360 68.897 1.00 64.28 O
TER
ATOM 2 P C A 482 26.350 179.183 77.255 1.00 79.24 P
ATOM 3 OP1 C A 482 26.530 179.506 78.699 1.00 79.99 O
ATOM 4 OP2 C A 482 26.311 180.286 76.257 1.00 79.83 O
ATOM 5 O5' C A 482 27.510 178.178 76.823 1.00 78.25 O
ATOM 6 C5' C A 482 27.923 177.108 77.688 1.00 77.27 C
ATOM 7 C4' C A 482 29.048 176.328 77.054 1.00 77.21 C
ATOM 8 O4' C A 482 28.574 175.668 75.850 1.00 76.33 O
ATOM 9 C3' C A 482 30.244 177.139 76.578 1.00 77.58 C
ATOM 10 O3' C A 482 31.132 177.470 77.648 1.00 78.13 O
ATOM 11 C2' C A 482 30.882 176.196 75.563 1.00 77.50 C
ATOM 12 O2' C A 482 31.669 175.184 76.160 1.00 79.64 O
ATOM 13 C1' C A 482 29.645 175.560 74.920 1.00 76.82 C
ATOM 14 N1 C A 482 29.250 176.203 73.651 1.00 76.44 N
ATOM 15 C2 C A 482 29.723 175.666 72.445 1.00 76.47 C
ATOM 16 O2 C A 482 30.462 174.671 72.472 1.00 77.30 O
ATOM 17 N3 C A 482 29.366 176.247 71.281 1.00 76.74 N
ATOM 18 C4 C A 482 28.577 177.321 71.286 1.00 75.57 C
ATOM 19 N4 C A 482 28.251 177.857 70.110 1.00 74.93 N
ATOM 20 C5 C A 482 28.088 177.892 72.494 1.00 75.35 C
ATOM 21 C6 C A 482 28.443 177.307 73.642 1.00 75.84 C
ATOM 22 P A A 483 31.755 178.952 77.742 1.00 77.56 P
ATOM 23 OP1 A A 483 32.555 179.063 78.989 1.00 77.17 O
ATOM 24 OP2 A A 483 30.641 179.905 77.497 1.00 77.79 O
ATOM 25 O5' A A 483 32.766 179.035 76.517 1.00 76.72 O
TER
ATOM 1 O3' A B 485 31.955 171.991 64.869 1.00 98.50 O
ATOM 2 P A B 486 31.624 171.605 66.393 1.00 95.17 P
ATOM 3 OP1 A B 486 30.692 170.444 66.356 1.00 95.26 O
ATOM 4 OP2 A B 486 31.220 172.846 67.101 1.00 94.70 O
ATOM 5 O5' A B 486 33.016 171.125 67.009 1.00 90.39 O
ATOM 6 C5' A B 486 33.761 170.021 66.447 1.00 82.28 C
ATOM 7 C4' A B 486 34.212 169.087 67.550 1.00 76.86 C
ATOM 8 O4' A B 486 34.711 169.887 68.657 1.00 75.26 O
ATOM 9 C3' A B 486 33.109 168.250 68.178 1.00 74.12 C
ATOM 10 O3' A B 486 32.884 167.050 67.452 1.00 70.35 O
ATOM 11 C2' A B 486 33.649 167.968 69.573 1.00 73.31 C
ATOM 12 O2' A B 486 34.593 166.917 69.613 1.00 71.57 O
ATOM 13 C1' A B 486 34.341 169.291 69.892 1.00 72.39 C
ATOM 14 N9 A B 486 33.481 170.224 70.617 1.00 69.44 N
ATOM 15 C8 A B 486 32.923 171.390 70.159 1.00 69.70 C
ATOM 16 N7 A B 486 32.209 172.023 71.056 1.00 69.80 N
ATOM 17 C5 A B 486 32.298 171.218 72.180 1.00 68.67 C
ATOM 18 C6 A B 486 31.765 171.340 73.468 1.00 68.02 C
ATOM 19 N6 A B 486 31.018 172.366 73.859 1.00 68.37 N
ATOM 20 N1 A B 486 32.036 170.362 74.356 1.00 68.91 N
ATOM 21 C2 A B 486 32.802 169.337 73.964 1.00 68.89 C
ATOM 22 N3 A B 486 33.366 169.111 72.781 1.00 68.63 N
ATOM 23 C4 A B 486 33.073 170.103 71.923 1.00 69.10 C
ATOM 24 P G B 487 31.407 166.433 67.380 1.00 66.66 P
ATOM 25 OP1 G B 487 31.546 165.060 66.836 1.00 65.55 O
ATOM 26 OP2 G B 487 30.550 167.422 66.683 1.00 68.45 O
ATOM 27 O5' G B 487 30.923 166.360 68.897 1.00 64.28 O
TER
Atoms:
C2: (29.723,175.666,72.445)
OP1: (26.530,179.506,78.699)
OP2: (26.311,180.286,76.257)
C4: (28.577,177.321,71.286)
O5': (27.510,178.178,76.823)
C3': (30.244,177.139,76.578)
C1': (29.645,175.560,74.920)
O4': (28.574,175.668,75.850)
C5': (27.923,177.108,77.688)
P: (26.350,179.183,77.255)
O2: (30.462,174.671,72.472)
C4': (29.048,176.328,77.054)
C2': (30.882,176.196,75.563)
O2': (31.669,175.184,76.160)
N1: (29.250,176.203,73.651)
N3: (29.366,176.247,71.281)
N4: (28.251,177.857,70.110)
C6: (28.443,177.307,73.642)
C5: (28.088,177.892,72.494)
O3': (31.132,177.470,77.648)
OP1: (26.530,179.506,78.699)
OP2: (26.311,180.286,76.257)
C4: (28.577,177.321,71.286)
O5': (27.510,178.178,76.823)
C3': (30.244,177.139,76.578)
C1': (29.645,175.560,74.920)
O4': (28.574,175.668,75.850)
C5': (27.923,177.108,77.688)
P: (26.350,179.183,77.255)
O2: (30.462,174.671,72.472)
C4': (29.048,176.328,77.054)
C2': (30.882,176.196,75.563)
O2': (31.669,175.184,76.160)
N1: (29.250,176.203,73.651)
N3: (29.366,176.247,71.281)
N4: (28.251,177.857,70.110)
C6: (28.443,177.307,73.642)
C5: (28.088,177.892,72.494)
O3': (31.132,177.470,77.648)
OP1: (30.692,170.444,66.356)
OP2: (31.220,172.846,67.101)
C3': (33.109,168.250,68.178)
C1': (34.341,169.291,69.892)
C5': (33.761,170.021,66.447)
O4': (34.711,169.887,68.657)
C8: (32.923,171.390,70.159)
O2': (34.593,166.917,69.613)
C6: (31.765,171.340,73.468)
C5: (32.298,171.218,72.180)
C4: (33.073,170.103,71.923)
P: (31.624,171.605,66.393)
C4': (34.212,169.087,67.550)
C2': (33.649,167.968,69.573)
C2: (32.802,169.337,73.964)
N1: (32.036,170.362,74.356)
N3: (33.366,169.111,72.781)
N6: (31.018,172.366,73.859)
N7: (32.209,172.023,71.056)
N9: (33.481,170.224,70.617)
O5': (33.016,171.125,67.009)
O3': (32.884,167.050,67.452)
OP2: (31.220,172.846,67.101)
C3': (33.109,168.250,68.178)
C1': (34.341,169.291,69.892)
C5': (33.761,170.021,66.447)
O4': (34.711,169.887,68.657)
C8: (32.923,171.390,70.159)
O2': (34.593,166.917,69.613)
C6: (31.765,171.340,73.468)
C5: (32.298,171.218,72.180)
C4: (33.073,170.103,71.923)
P: (31.624,171.605,66.393)
C4': (34.212,169.087,67.550)
C2': (33.649,167.968,69.573)
C2: (32.802,169.337,73.964)
N1: (32.036,170.362,74.356)
N3: (33.366,169.111,72.781)
N6: (31.018,172.366,73.859)
N7: (32.209,172.023,71.056)
N9: (33.481,170.224,70.617)
O5': (33.016,171.125,67.009)
O3': (32.884,167.050,67.452)
Image (generated by PyMOL):