ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQL:0198:0217

Extra

PDB:
ATOM 1 O3' G A 197 50.261 98.722 35.434 1.00 42.50 O
ATOM 2 P U A 198 51.125 98.032 36.606 1.00 44.63 P
ATOM 3 OP1 U A 198 50.205 97.777 37.734 1.00 45.17 O
ATOM 4 OP2 U A 198 52.340 98.856 36.831 1.00 50.74 O
ATOM 5 O5' U A 198 51.660 96.656 35.989 1.00 44.73 O
ATOM 6 C5' U A 198 50.768 95.568 35.708 1.00 41.86 C
ATOM 7 C4' U A 198 51.440 94.520 34.841 1.00 42.01 C
ATOM 8 O4' U A 198 52.015 95.141 33.661 1.00 41.19 O
ATOM 9 C3' U A 198 52.591 93.698 35.407 1.00 41.24 C
ATOM 10 O3' U A 198 52.100 92.626 36.225 1.00 41.25 O
ATOM 11 C2' U A 198 53.208 93.138 34.127 1.00 41.56 C
ATOM 12 O2' U A 198 52.462 92.059 33.606 1.00 42.00 O
ATOM 13 C1' U A 198 53.057 94.321 33.165 1.00 41.10 C
ATOM 14 N1 U A 198 54.290 95.114 33.041 1.00 42.13 N
ATOM 15 C2 U A 198 55.282 94.622 32.208 1.00 43.77 C
ATOM 16 O2 U A 198 55.149 93.617 31.529 1.00 44.98 O
ATOM 17 N3 U A 198 56.441 95.352 32.194 1.00 45.21 N
ATOM 18 C4 U A 198 56.701 96.511 32.887 1.00 44.64 C
ATOM 19 O4 U A 198 57.805 97.041 32.776 1.00 46.98 O
ATOM 20 C5 U A 198 55.616 96.985 33.688 1.00 43.77 C
ATOM 21 C6 U A 198 54.476 96.287 33.739 1.00 43.15 C
ATOM 22 P U A 199 53.072 91.894 37.286 1.00 39.06 P
ATOM 23 OP1 U A 199 52.264 90.828 37.910 1.00 43.51 O
ATOM 24 OP2 U A 199 53.703 92.920 38.144 1.00 43.97 O
ATOM 25 O5' U A 199 54.221 91.215 36.419 1.00 39.60 O
TER

ATOM 1 O3' C B 216 64.607 91.988 25.243 1.00 44.08 O
ATOM 2 P G B 217 63.366 92.667 24.484 1.00 44.85 P
ATOM 3 OP1 G B 217 63.696 92.666 23.036 1.00 47.86 O
ATOM 4 OP2 G B 217 62.997 93.937 25.147 1.00 46.10 O
ATOM 5 O5' G B 217 62.159 91.655 24.719 1.00 46.52 O
ATOM 6 C5' G B 217 62.254 90.278 24.319 1.00 42.44 C
ATOM 7 C4' G B 217 61.101 89.492 24.892 1.00 45.24 C
ATOM 8 O4' G B 217 61.161 89.516 26.348 1.00 46.13 O
ATOM 9 C3' G B 217 59.716 90.030 24.584 1.00 44.72 C
ATOM 10 O3' G B 217 59.277 89.654 23.288 1.00 45.16 O
ATOM 11 C2' G B 217 58.886 89.400 25.692 1.00 44.45 C
ATOM 12 O2' G B 217 58.631 88.027 25.457 1.00 42.88 O
ATOM 13 C1' G B 217 59.844 89.528 26.880 1.00 44.20 C
ATOM 14 N9 G B 217 59.660 90.771 27.626 1.00 43.60 N
ATOM 15 C8 G B 217 60.453 91.891 27.568 1.00 43.42 C
ATOM 16 N7 G B 217 60.025 92.863 28.325 1.00 44.58 N
ATOM 17 C5 G B 217 58.883 92.357 28.929 1.00 44.23 C
ATOM 18 C6 G B 217 57.980 92.964 29.842 1.00 44.19 C
ATOM 19 O6 G B 217 58.015 94.103 30.320 1.00 45.22 O
ATOM 20 N1 G B 217 56.947 92.102 30.190 1.00 44.18 N
ATOM 21 C2 G B 217 56.798 90.822 29.724 1.00 43.04 C
ATOM 22 N2 G B 217 55.723 90.160 30.176 1.00 41.79 N
ATOM 23 N3 G B 217 57.634 90.238 28.876 1.00 43.07 N
ATOM 24 C4 G B 217 58.646 91.061 28.518 1.00 43.75 C
ATOM 25 P C B 218 58.329 90.645 22.452 1.00 46.61 P
ATOM 26 OP1 C B 218 58.119 90.012 21.121 1.00 51.17 O
ATOM 27 OP2 C B 218 58.853 92.032 22.531 1.00 48.76 O
ATOM 28 O5' C B 218 56.948 90.632 23.237 1.00 47.54 O
TER

Atoms:
C4: (56.701,96.511,32.887)
N3: (56.441,95.352,32.194)
OP1: (50.205,97.777,37.734)
OP2: (52.340,98.856,36.831)
C2: (55.282,94.622,32.208)
C1': (53.057,94.321,33.165)
C3': (52.591,93.698,35.407)
O5': (51.660,96.656,35.989)
O4': (52.015,95.141,33.661)
C5': (50.768,95.568,35.708)
P: (51.125,98.032,36.606)
C4': (51.440,94.520,34.841)
C2': (53.208,93.138,34.127)
O2': (52.462,92.059,33.606)
N1: (54.290,95.114,33.041)
O4: (57.805,97.041,32.776)
O2: (55.149,93.617,31.529)
C6: (54.476,96.287,33.739)
C5: (55.616,96.985,33.688)
O3': (52.100,92.626,36.225)
OP1: (63.696,92.666,23.036)
OP2: (62.997,93.937,25.147)
C3': (59.716,90.030,24.584)
C1': (59.844,89.528,26.880)
C5': (62.254,90.278,24.319)
O6: (58.015,94.103,30.320)
O4': (61.161,89.516,26.348)
C8: (60.453,91.891,27.568)
C2: (56.798,90.822,29.724)
C6: (57.980,92.964,29.842)
C5: (58.883,92.357,28.929)
C4: (58.646,91.061,28.518)
P: (63.366,92.667,24.484)
C4': (61.101,89.492,24.892)
C2': (58.886,89.400,25.692)
O2': (58.631,88.027,25.457)
N1: (56.947,92.102,30.190)
N2: (55.723,90.160,30.176)
N3: (57.634,90.238,28.876)
N7: (60.025,92.863,28.325)
N9: (59.660,90.771,27.626)
O5': (62.159,91.655,24.719)
O3': (59.277,89.654,23.288)
Image (generated by PyMOL):
PyMOL image
show in jmol