ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQO:02005:0525

Extra

PDB:
ATOM 1 O3' G A2004 43.348 130.476 90.283 1.00 36.75 O
ATOM 2 P U A2005 44.108 129.136 89.808 1.00 40.04 P
ATOM 3 OP1 U A2005 44.905 128.645 90.965 1.00 38.60 O
ATOM 4 OP2 U A2005 44.777 129.394 88.507 1.00 40.46 O
ATOM 5 O5' U A2005 42.937 128.082 89.578 1.00 40.11 O
ATOM 6 C5' U A2005 42.244 128.001 88.319 1.00 39.39 C
ATOM 7 C4' U A2005 40.900 127.328 88.501 1.00 37.89 C
ATOM 8 O4' U A2005 41.074 125.939 88.901 1.00 37.01 O
ATOM 9 C3' U A2005 40.030 127.913 89.601 1.00 37.76 C
ATOM 10 O3' U A2005 39.365 129.092 89.164 1.00 37.27 O
ATOM 11 C2' U A2005 39.084 126.756 89.892 1.00 36.25 C
ATOM 12 O2' U A2005 38.073 126.578 88.924 1.00 39.42 O
ATOM 13 C1' U A2005 40.030 125.566 89.781 1.00 32.87 C
ATOM 14 N1 U A2005 40.606 125.201 91.084 1.00 34.43 N
ATOM 15 C2 U A2005 39.826 124.420 91.933 1.00 33.61 C
ATOM 16 O2 U A2005 38.700 124.053 91.655 1.00 34.02 O
ATOM 17 N3 U A2005 40.418 124.086 93.121 1.00 33.45 N
ATOM 18 C4 U A2005 41.671 124.440 93.552 1.00 34.38 C
ATOM 19 O4 U A2005 42.060 124.034 94.645 1.00 35.81 O
ATOM 20 C5 U A2005 42.412 125.272 92.643 1.00 32.54 C
ATOM 21 C6 U A2005 41.872 125.610 91.468 1.00 34.08 C
ATOM 22 P A A2006 39.005 130.247 90.222 1.00 38.63 P
ATOM 23 OP1 A A2006 38.436 131.361 89.410 1.00 40.74 O
ATOM 24 OP2 A A2006 40.149 130.502 91.117 1.00 38.50 O
ATOM 25 O5' A A2006 37.845 129.611 91.113 1.00 40.27 O
TER

ATOM 1 O3' A B 524 30.977 124.858 100.871 1.00 41.57 O
ATOM 2 P G B 525 30.339 123.400 100.672 1.00 40.55 P
ATOM 3 OP1 G B 525 29.134 123.577 99.834 1.00 42.21 O
ATOM 4 OP2 G B 525 30.221 122.731 101.992 1.00 44.30 O
ATOM 5 O5' G B 525 31.445 122.638 99.817 1.00 40.54 O
ATOM 6 C5' G B 525 31.112 121.469 99.059 1.00 38.45 C
ATOM 7 C4' G B 525 31.131 121.787 97.585 1.00 39.12 C
ATOM 8 O4' G B 525 32.440 122.311 97.200 1.00 36.75 O
ATOM 9 C3' G B 525 30.877 120.592 96.668 1.00 36.35 C
ATOM 10 O3' G B 525 30.257 121.061 95.475 1.00 36.03 O
ATOM 11 C2' G B 525 32.298 120.176 96.302 1.00 36.26 C
ATOM 12 O2' G B 525 32.382 119.406 95.124 1.00 36.17 O
ATOM 13 C1' G B 525 32.928 121.553 96.116 1.00 36.31 C
ATOM 14 N9 G B 525 34.383 121.642 96.075 1.00 37.77 N
ATOM 15 C8 G B 525 35.287 121.275 97.045 1.00 36.37 C
ATOM 16 N7 G B 525 36.524 121.506 96.702 1.00 36.04 N
ATOM 17 C5 G B 525 36.431 122.056 95.432 1.00 36.85 C
ATOM 18 C6 G B 525 37.449 122.528 94.552 1.00 38.44 C
ATOM 19 O6 G B 525 38.676 122.581 94.748 1.00 36.83 O
ATOM 20 N1 G B 525 36.910 122.988 93.348 1.00 35.74 N
ATOM 21 C2 G B 525 35.566 123.022 93.046 1.00 37.21 C
ATOM 22 N2 G B 525 35.233 123.502 91.836 1.00 35.16 N
ATOM 23 N3 G B 525 34.613 122.612 93.870 1.00 35.50 N
ATOM 24 C4 G B 525 35.116 122.138 95.029 1.00 36.11 C
ATOM 25 P C B 526 28.686 121.385 95.446 1.00 35.25 P
ATOM 26 OP1 C B 526 27.963 120.466 96.346 1.00 36.65 O
ATOM 27 OP2 C B 526 28.331 121.434 94.009 1.00 37.38 O
ATOM 28 O5' C B 526 28.571 122.862 96.028 1.00 37.03 O
TER

Atoms:
C4: (41.671,124.440,93.552)
N3: (40.418,124.086,93.121)
OP1: (44.905,128.645,90.965)
OP2: (44.777,129.394,88.507)
C2: (39.826,124.420,91.933)
C1': (40.030,125.566,89.781)
C3': (40.030,127.913,89.601)
O5': (42.937,128.082,89.578)
O4': (41.074,125.939,88.901)
C5': (42.244,128.001,88.319)
P: (44.108,129.136,89.808)
C4': (40.900,127.328,88.501)
C2': (39.084,126.756,89.892)
O2': (38.073,126.578,88.924)
N1: (40.606,125.201,91.084)
O4: (42.060,124.034,94.645)
O2: (38.700,124.053,91.655)
C6: (41.872,125.610,91.468)
C5: (42.412,125.272,92.643)
O3': (39.365,129.092,89.164)
OP1: (29.134,123.577,99.834)
OP2: (30.221,122.731,101.992)
C3': (30.877,120.592,96.668)
C1': (32.928,121.553,96.116)
C5': (31.112,121.469,99.059)
O6: (38.676,122.581,94.748)
O4': (32.440,122.311,97.200)
C8: (35.287,121.275,97.045)
C2: (35.566,123.022,93.046)
C6: (37.449,122.528,94.552)
C5: (36.431,122.056,95.432)
C4: (35.116,122.138,95.029)
P: (30.339,123.400,100.672)
C4': (31.131,121.787,97.585)
C2': (32.298,120.176,96.302)
O2': (32.382,119.406,95.124)
N1: (36.910,122.988,93.348)
N2: (35.233,123.502,91.836)
N3: (34.613,122.612,93.870)
N7: (36.524,121.506,96.702)
N9: (34.383,121.642,96.075)
O5': (31.445,122.638,99.817)
O3': (30.257,121.061,95.475)
Image (generated by PyMOL):
PyMOL image
show in jmol