Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:0482:0486
Extra
PDB:
ATOM 1 O3' U A 481 25.060 177.853 76.758 1.00 57.96 O
ATOM 2 P C A 482 26.279 178.879 76.897 1.00 61.53 P
ATOM 3 OP1 C A 482 26.358 179.250 78.331 1.00 61.96 O
ATOM 4 OP2 C A 482 26.106 179.940 75.866 1.00 62.20 O
ATOM 5 O5' C A 482 27.565 178.016 76.518 1.00 61.24 O
ATOM 6 C5' C A 482 27.994 176.937 77.359 1.00 61.27 C
ATOM 7 C4' C A 482 29.098 176.154 76.693 1.00 61.91 C
ATOM 8 O4' C A 482 28.599 175.483 75.506 1.00 61.31 O
ATOM 9 C3' C A 482 30.277 176.959 76.177 1.00 62.74 C
ATOM 10 O3' C A 482 31.172 177.315 77.227 1.00 63.35 O
ATOM 11 C2' C A 482 30.903 175.987 75.183 1.00 62.95 C
ATOM 12 O2' C A 482 31.681 174.981 75.800 1.00 64.72 O
ATOM 13 C1' C A 482 29.659 175.338 74.572 1.00 61.80 C
ATOM 14 N1 C A 482 29.264 175.950 73.292 1.00 61.52 N
ATOM 15 C2 C A 482 29.638 175.315 72.100 1.00 61.88 C
ATOM 16 O2 C A 482 30.299 174.267 72.152 1.00 62.75 O
ATOM 17 N3 C A 482 29.276 175.860 70.922 1.00 61.34 N
ATOM 18 C4 C A 482 28.575 176.991 70.898 1.00 59.90 C
ATOM 19 N4 C A 482 28.237 177.483 69.706 1.00 60.01 N
ATOM 20 C5 C A 482 28.189 177.664 72.091 1.00 59.76 C
ATOM 21 C6 C A 482 28.549 177.114 73.255 1.00 60.59 C
ATOM 22 P A A 483 31.812 178.790 77.264 1.00 63.71 P
ATOM 23 OP1 A A 483 32.324 179.053 78.633 1.00 63.58 O
ATOM 24 OP2 A A 483 30.821 179.719 76.659 1.00 65.34 O
ATOM 25 O5' A A 483 33.061 178.711 76.286 1.00 61.33 O
TER
ATOM 1 O3' A B 485 31.919 172.491 65.079 1.00 90.91 O
ATOM 2 P A B 486 31.656 171.218 66.029 1.00 88.04 P
ATOM 3 OP1 A B 486 31.286 170.086 65.132 1.00 88.10 O
ATOM 4 OP2 A B 486 30.712 171.651 67.095 1.00 88.41 O
ATOM 5 O5' A B 486 33.057 170.899 66.721 1.00 81.05 O
ATOM 6 C5' A B 486 33.882 169.801 66.269 1.00 72.06 C
ATOM 7 C4' A B 486 34.195 168.867 67.419 1.00 66.30 C
ATOM 8 O4' A B 486 34.611 169.662 68.558 1.00 65.23 O
ATOM 9 C3' A B 486 33.037 168.047 67.965 1.00 63.25 C
ATOM 10 O3' A B 486 32.838 166.850 67.233 1.00 59.00 O
ATOM 11 C2' A B 486 33.493 167.734 69.380 1.00 62.91 C
ATOM 12 O2' A B 486 34.416 166.668 69.436 1.00 62.53 O
ATOM 13 C1' A B 486 34.188 169.040 69.760 1.00 62.83 C
ATOM 14 N9 A B 486 33.303 169.960 70.470 1.00 61.24 N
ATOM 15 C8 A B 486 32.657 171.071 69.990 1.00 61.06 C
ATOM 16 N7 A B 486 31.933 171.689 70.890 1.00 61.16 N
ATOM 17 C5 A B 486 32.114 170.933 72.037 1.00 61.16 C
ATOM 18 C6 A B 486 31.614 171.062 73.341 1.00 61.75 C
ATOM 19 N6 A B 486 30.799 172.041 73.728 1.00 63.17 N
ATOM 20 N1 A B 486 31.988 170.138 74.250 1.00 63.08 N
ATOM 21 C2 A B 486 32.809 169.153 73.862 1.00 62.74 C
ATOM 22 N3 A B 486 33.344 168.926 72.668 1.00 61.46 N
ATOM 23 C4 A B 486 32.953 169.864 71.791 1.00 61.10 C
ATOM 24 P G B 487 31.378 166.192 67.175 1.00 55.80 P
ATOM 25 OP1 G B 487 31.544 164.824 66.627 1.00 54.51 O
ATOM 26 OP2 G B 487 30.477 167.152 66.496 1.00 56.18 O
ATOM 27 O5' G B 487 30.924 166.099 68.698 1.00 53.33 O
TER
ATOM 2 P C A 482 26.279 178.879 76.897 1.00 61.53 P
ATOM 3 OP1 C A 482 26.358 179.250 78.331 1.00 61.96 O
ATOM 4 OP2 C A 482 26.106 179.940 75.866 1.00 62.20 O
ATOM 5 O5' C A 482 27.565 178.016 76.518 1.00 61.24 O
ATOM 6 C5' C A 482 27.994 176.937 77.359 1.00 61.27 C
ATOM 7 C4' C A 482 29.098 176.154 76.693 1.00 61.91 C
ATOM 8 O4' C A 482 28.599 175.483 75.506 1.00 61.31 O
ATOM 9 C3' C A 482 30.277 176.959 76.177 1.00 62.74 C
ATOM 10 O3' C A 482 31.172 177.315 77.227 1.00 63.35 O
ATOM 11 C2' C A 482 30.903 175.987 75.183 1.00 62.95 C
ATOM 12 O2' C A 482 31.681 174.981 75.800 1.00 64.72 O
ATOM 13 C1' C A 482 29.659 175.338 74.572 1.00 61.80 C
ATOM 14 N1 C A 482 29.264 175.950 73.292 1.00 61.52 N
ATOM 15 C2 C A 482 29.638 175.315 72.100 1.00 61.88 C
ATOM 16 O2 C A 482 30.299 174.267 72.152 1.00 62.75 O
ATOM 17 N3 C A 482 29.276 175.860 70.922 1.00 61.34 N
ATOM 18 C4 C A 482 28.575 176.991 70.898 1.00 59.90 C
ATOM 19 N4 C A 482 28.237 177.483 69.706 1.00 60.01 N
ATOM 20 C5 C A 482 28.189 177.664 72.091 1.00 59.76 C
ATOM 21 C6 C A 482 28.549 177.114 73.255 1.00 60.59 C
ATOM 22 P A A 483 31.812 178.790 77.264 1.00 63.71 P
ATOM 23 OP1 A A 483 32.324 179.053 78.633 1.00 63.58 O
ATOM 24 OP2 A A 483 30.821 179.719 76.659 1.00 65.34 O
ATOM 25 O5' A A 483 33.061 178.711 76.286 1.00 61.33 O
TER
ATOM 1 O3' A B 485 31.919 172.491 65.079 1.00 90.91 O
ATOM 2 P A B 486 31.656 171.218 66.029 1.00 88.04 P
ATOM 3 OP1 A B 486 31.286 170.086 65.132 1.00 88.10 O
ATOM 4 OP2 A B 486 30.712 171.651 67.095 1.00 88.41 O
ATOM 5 O5' A B 486 33.057 170.899 66.721 1.00 81.05 O
ATOM 6 C5' A B 486 33.882 169.801 66.269 1.00 72.06 C
ATOM 7 C4' A B 486 34.195 168.867 67.419 1.00 66.30 C
ATOM 8 O4' A B 486 34.611 169.662 68.558 1.00 65.23 O
ATOM 9 C3' A B 486 33.037 168.047 67.965 1.00 63.25 C
ATOM 10 O3' A B 486 32.838 166.850 67.233 1.00 59.00 O
ATOM 11 C2' A B 486 33.493 167.734 69.380 1.00 62.91 C
ATOM 12 O2' A B 486 34.416 166.668 69.436 1.00 62.53 O
ATOM 13 C1' A B 486 34.188 169.040 69.760 1.00 62.83 C
ATOM 14 N9 A B 486 33.303 169.960 70.470 1.00 61.24 N
ATOM 15 C8 A B 486 32.657 171.071 69.990 1.00 61.06 C
ATOM 16 N7 A B 486 31.933 171.689 70.890 1.00 61.16 N
ATOM 17 C5 A B 486 32.114 170.933 72.037 1.00 61.16 C
ATOM 18 C6 A B 486 31.614 171.062 73.341 1.00 61.75 C
ATOM 19 N6 A B 486 30.799 172.041 73.728 1.00 63.17 N
ATOM 20 N1 A B 486 31.988 170.138 74.250 1.00 63.08 N
ATOM 21 C2 A B 486 32.809 169.153 73.862 1.00 62.74 C
ATOM 22 N3 A B 486 33.344 168.926 72.668 1.00 61.46 N
ATOM 23 C4 A B 486 32.953 169.864 71.791 1.00 61.10 C
ATOM 24 P G B 487 31.378 166.192 67.175 1.00 55.80 P
ATOM 25 OP1 G B 487 31.544 164.824 66.627 1.00 54.51 O
ATOM 26 OP2 G B 487 30.477 167.152 66.496 1.00 56.18 O
ATOM 27 O5' G B 487 30.924 166.099 68.698 1.00 53.33 O
TER
Atoms:
C2: (29.638,175.315,72.100)
OP1: (26.358,179.250,78.331)
OP2: (26.106,179.940,75.866)
C4: (28.575,176.991,70.898)
O5': (27.565,178.016,76.518)
C3': (30.277,176.959,76.177)
C1': (29.659,175.338,74.572)
O4': (28.599,175.483,75.506)
C5': (27.994,176.937,77.359)
P: (26.279,178.879,76.897)
O2: (30.299,174.267,72.152)
C4': (29.098,176.154,76.693)
C2': (30.903,175.987,75.183)
O2': (31.681,174.981,75.800)
N1: (29.264,175.950,73.292)
N3: (29.276,175.860,70.922)
N4: (28.237,177.483,69.706)
C6: (28.549,177.114,73.255)
C5: (28.189,177.664,72.091)
O3': (31.172,177.315,77.227)
OP1: (26.358,179.250,78.331)
OP2: (26.106,179.940,75.866)
C4: (28.575,176.991,70.898)
O5': (27.565,178.016,76.518)
C3': (30.277,176.959,76.177)
C1': (29.659,175.338,74.572)
O4': (28.599,175.483,75.506)
C5': (27.994,176.937,77.359)
P: (26.279,178.879,76.897)
O2: (30.299,174.267,72.152)
C4': (29.098,176.154,76.693)
C2': (30.903,175.987,75.183)
O2': (31.681,174.981,75.800)
N1: (29.264,175.950,73.292)
N3: (29.276,175.860,70.922)
N4: (28.237,177.483,69.706)
C6: (28.549,177.114,73.255)
C5: (28.189,177.664,72.091)
O3': (31.172,177.315,77.227)
OP1: (31.286,170.086,65.132)
OP2: (30.712,171.651,67.095)
C3': (33.037,168.047,67.965)
C1': (34.188,169.040,69.760)
C5': (33.882,169.801,66.269)
O4': (34.611,169.662,68.558)
C8: (32.657,171.071,69.990)
O2': (34.416,166.668,69.436)
C6: (31.614,171.062,73.341)
C5: (32.114,170.933,72.037)
C4: (32.953,169.864,71.791)
P: (31.656,171.218,66.029)
C4': (34.195,168.867,67.419)
C2': (33.493,167.734,69.380)
C2: (32.809,169.153,73.862)
N1: (31.988,170.138,74.250)
N3: (33.344,168.926,72.668)
N6: (30.799,172.041,73.728)
N7: (31.933,171.689,70.890)
N9: (33.303,169.960,70.470)
O5': (33.057,170.899,66.721)
O3': (32.838,166.850,67.233)
OP2: (30.712,171.651,67.095)
C3': (33.037,168.047,67.965)
C1': (34.188,169.040,69.760)
C5': (33.882,169.801,66.269)
O4': (34.611,169.662,68.558)
C8: (32.657,171.071,69.990)
O2': (34.416,166.668,69.436)
C6: (31.614,171.062,73.341)
C5: (32.114,170.933,72.037)
C4: (32.953,169.864,71.791)
P: (31.656,171.218,66.029)
C4': (34.195,168.867,67.419)
C2': (33.493,167.734,69.380)
C2: (32.809,169.153,73.862)
N1: (31.988,170.138,74.250)
N3: (33.344,168.926,72.668)
N6: (30.799,172.041,73.728)
N7: (31.933,171.689,70.890)
N9: (33.303,169.960,70.470)
O5': (33.057,170.899,66.721)
O3': (32.838,166.850,67.233)
Image (generated by PyMOL):