Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A2506:A2562
Extra
PDB:
ATOM 1 O3' A A2505 -47.328 97.529 175.503 1.00 0.01 O
ATOM 2 P U A2506 -48.319 96.322 175.803 1.00 0.01 P
ATOM 3 OP1 U A2506 -47.823 95.658 177.025 1.00 0.01 O
ATOM 4 OP2 U A2506 -48.430 95.545 174.551 1.00 0.01 O
ATOM 5 O5' U A2506 -49.690 97.048 176.109 1.00 0.01 O
ATOM 6 C5' U A2506 -49.797 97.997 177.149 1.00 0.01 C
ATOM 7 C4' U A2506 -50.830 99.016 176.822 1.00 0.01 C
ATOM 8 O4' U A2506 -50.362 99.826 175.716 1.00 0.01 O
ATOM 9 C3' U A2506 -52.132 98.460 176.305 1.00 0.01 C
ATOM 10 O3' U A2506 -52.968 97.942 177.303 1.00 0.01 O
ATOM 11 C2' U A2506 -52.708 99.636 175.560 1.00 0.01 C
ATOM 12 O2' U A2506 -53.163 100.619 176.466 1.00 0.01 O
ATOM 13 C1' U A2506 -51.456 100.153 174.876 1.00 0.01 C
ATOM 14 N1 U A2506 -51.254 99.517 173.558 1.00 0.01 N
ATOM 15 C2 U A2506 -51.934 100.061 172.500 1.00 0.01 C
ATOM 16 O2 U A2506 -52.643 101.001 172.663 1.00 0.01 O
ATOM 17 N3 U A2506 -51.786 99.512 171.271 1.00 0.01 N
ATOM 18 C4 U A2506 -51.000 98.437 170.983 1.00 0.01 C
ATOM 19 O4 U A2506 -50.934 98.000 169.827 1.00 0.01 O
ATOM 20 C5 U A2506 -50.308 97.908 172.136 1.00 0.01 C
ATOM 21 C6 U A2506 -50.445 98.447 173.360 1.00 0.01 C
ATOM 22 P C A2507 -53.662 96.520 177.053 1.00 0.01 P
ATOM 23 OP1 C A2507 -53.612 95.767 178.320 1.00 0.01 O
ATOM 24 OP2 C A2507 -53.022 95.937 175.865 1.00 0.01 O
ATOM 25 O5' C A2507 -55.157 96.902 176.705 1.00 0.01 O
TER
ATOM 1 O3' G B2561 -59.081 104.224 163.119 1.00 0.01 O
ATOM 2 P G B2562 -57.866 105.149 163.527 1.00 0.07 P
ATOM 3 OP1 G B2562 -58.087 106.453 162.881 1.00 0.07 O
ATOM 4 OP2 G B2562 -56.639 104.402 163.218 1.00 0.07 O
ATOM 5 O5' G B2562 -58.041 105.269 165.106 1.00 0.07 O
ATOM 6 C5' G B2562 -59.192 105.887 165.657 1.00 0.07 C
ATOM 7 C4' G B2562 -59.146 105.969 167.173 1.00 0.07 C
ATOM 8 O4' G B2562 -59.226 104.647 167.763 1.00 0.07 O
ATOM 9 C3' G B2562 -57.893 106.566 167.786 1.00 0.07 C
ATOM 10 O3' G B2562 -57.863 107.986 167.725 1.00 0.07 O
ATOM 11 C2' G B2562 -57.973 106.025 169.196 1.00 0.07 C
ATOM 12 O2' G B2562 -58.990 106.701 169.924 1.00 0.07 O
ATOM 13 C1' G B2562 -58.438 104.606 168.925 1.00 0.07 C
ATOM 14 N9 G B2562 -57.312 103.715 168.669 1.00 0.01 N
ATOM 15 C8 G B2562 -56.922 103.244 167.466 1.00 0.01 C
ATOM 16 N7 G B2562 -55.897 102.457 167.544 1.00 0.01 N
ATOM 17 C5 G B2562 -55.610 102.417 168.884 1.00 0.01 C
ATOM 18 C6 G B2562 -54.590 101.730 169.573 1.00 0.01 C
ATOM 19 O6 G B2562 -53.711 100.997 169.115 1.00 0.01 O
ATOM 20 N1 G B2562 -54.671 101.975 170.933 1.00 0.01 N
ATOM 21 C2 G B2562 -55.608 102.771 171.553 1.00 0.01 C
ATOM 22 N2 G B2562 -55.527 102.887 172.892 1.00 0.01 N
ATOM 23 N3 G B2562 -56.564 103.416 170.904 1.00 0.01 N
ATOM 24 C4 G B2562 -56.489 103.189 169.590 1.00 0.01 C
ATOM 25 P U B2563 -56.482 108.741 167.445 1.00 0.01 P
ATOM 26 OP1 U B2563 -56.758 110.193 167.507 1.00 0.01 O
ATOM 27 OP2 U B2563 -55.918 108.173 166.204 1.00 0.01 O
ATOM 28 O5' U B2563 -55.597 108.302 168.684 1.00 0.01 O
TER
ATOM 2 P U A2506 -48.319 96.322 175.803 1.00 0.01 P
ATOM 3 OP1 U A2506 -47.823 95.658 177.025 1.00 0.01 O
ATOM 4 OP2 U A2506 -48.430 95.545 174.551 1.00 0.01 O
ATOM 5 O5' U A2506 -49.690 97.048 176.109 1.00 0.01 O
ATOM 6 C5' U A2506 -49.797 97.997 177.149 1.00 0.01 C
ATOM 7 C4' U A2506 -50.830 99.016 176.822 1.00 0.01 C
ATOM 8 O4' U A2506 -50.362 99.826 175.716 1.00 0.01 O
ATOM 9 C3' U A2506 -52.132 98.460 176.305 1.00 0.01 C
ATOM 10 O3' U A2506 -52.968 97.942 177.303 1.00 0.01 O
ATOM 11 C2' U A2506 -52.708 99.636 175.560 1.00 0.01 C
ATOM 12 O2' U A2506 -53.163 100.619 176.466 1.00 0.01 O
ATOM 13 C1' U A2506 -51.456 100.153 174.876 1.00 0.01 C
ATOM 14 N1 U A2506 -51.254 99.517 173.558 1.00 0.01 N
ATOM 15 C2 U A2506 -51.934 100.061 172.500 1.00 0.01 C
ATOM 16 O2 U A2506 -52.643 101.001 172.663 1.00 0.01 O
ATOM 17 N3 U A2506 -51.786 99.512 171.271 1.00 0.01 N
ATOM 18 C4 U A2506 -51.000 98.437 170.983 1.00 0.01 C
ATOM 19 O4 U A2506 -50.934 98.000 169.827 1.00 0.01 O
ATOM 20 C5 U A2506 -50.308 97.908 172.136 1.00 0.01 C
ATOM 21 C6 U A2506 -50.445 98.447 173.360 1.00 0.01 C
ATOM 22 P C A2507 -53.662 96.520 177.053 1.00 0.01 P
ATOM 23 OP1 C A2507 -53.612 95.767 178.320 1.00 0.01 O
ATOM 24 OP2 C A2507 -53.022 95.937 175.865 1.00 0.01 O
ATOM 25 O5' C A2507 -55.157 96.902 176.705 1.00 0.01 O
TER
ATOM 1 O3' G B2561 -59.081 104.224 163.119 1.00 0.01 O
ATOM 2 P G B2562 -57.866 105.149 163.527 1.00 0.07 P
ATOM 3 OP1 G B2562 -58.087 106.453 162.881 1.00 0.07 O
ATOM 4 OP2 G B2562 -56.639 104.402 163.218 1.00 0.07 O
ATOM 5 O5' G B2562 -58.041 105.269 165.106 1.00 0.07 O
ATOM 6 C5' G B2562 -59.192 105.887 165.657 1.00 0.07 C
ATOM 7 C4' G B2562 -59.146 105.969 167.173 1.00 0.07 C
ATOM 8 O4' G B2562 -59.226 104.647 167.763 1.00 0.07 O
ATOM 9 C3' G B2562 -57.893 106.566 167.786 1.00 0.07 C
ATOM 10 O3' G B2562 -57.863 107.986 167.725 1.00 0.07 O
ATOM 11 C2' G B2562 -57.973 106.025 169.196 1.00 0.07 C
ATOM 12 O2' G B2562 -58.990 106.701 169.924 1.00 0.07 O
ATOM 13 C1' G B2562 -58.438 104.606 168.925 1.00 0.07 C
ATOM 14 N9 G B2562 -57.312 103.715 168.669 1.00 0.01 N
ATOM 15 C8 G B2562 -56.922 103.244 167.466 1.00 0.01 C
ATOM 16 N7 G B2562 -55.897 102.457 167.544 1.00 0.01 N
ATOM 17 C5 G B2562 -55.610 102.417 168.884 1.00 0.01 C
ATOM 18 C6 G B2562 -54.590 101.730 169.573 1.00 0.01 C
ATOM 19 O6 G B2562 -53.711 100.997 169.115 1.00 0.01 O
ATOM 20 N1 G B2562 -54.671 101.975 170.933 1.00 0.01 N
ATOM 21 C2 G B2562 -55.608 102.771 171.553 1.00 0.01 C
ATOM 22 N2 G B2562 -55.527 102.887 172.892 1.00 0.01 N
ATOM 23 N3 G B2562 -56.564 103.416 170.904 1.00 0.01 N
ATOM 24 C4 G B2562 -56.489 103.189 169.590 1.00 0.01 C
ATOM 25 P U B2563 -56.482 108.741 167.445 1.00 0.01 P
ATOM 26 OP1 U B2563 -56.758 110.193 167.507 1.00 0.01 O
ATOM 27 OP2 U B2563 -55.918 108.173 166.204 1.00 0.01 O
ATOM 28 O5' U B2563 -55.597 108.302 168.684 1.00 0.01 O
TER
Atoms:
C4: (-51.000,98.437,170.983)
N3: (-51.786,99.512,171.271)
OP1: (-47.823,95.658,177.025)
OP2: (-48.430,95.545,174.551)
C2: (-51.934,100.061,172.500)
C1': (-51.456,100.153,174.876)
C3': (-52.132,98.460,176.305)
O5': (-49.690,97.048,176.109)
O4': (-50.362,99.826,175.716)
C5': (-49.797,97.997,177.149)
P: (-48.319,96.322,175.803)
C4': (-50.830,99.016,176.822)
C2': (-52.708,99.636,175.560)
O2': (-53.163,100.619,176.466)
N1: (-51.254,99.517,173.558)
O4: (-50.934,98.000,169.827)
O2: (-52.643,101.001,172.663)
C6: (-50.445,98.447,173.360)
C5: (-50.308,97.908,172.136)
O3': (-52.968,97.942,177.303)
N3: (-51.786,99.512,171.271)
OP1: (-47.823,95.658,177.025)
OP2: (-48.430,95.545,174.551)
C2: (-51.934,100.061,172.500)
C1': (-51.456,100.153,174.876)
C3': (-52.132,98.460,176.305)
O5': (-49.690,97.048,176.109)
O4': (-50.362,99.826,175.716)
C5': (-49.797,97.997,177.149)
P: (-48.319,96.322,175.803)
C4': (-50.830,99.016,176.822)
C2': (-52.708,99.636,175.560)
O2': (-53.163,100.619,176.466)
N1: (-51.254,99.517,173.558)
O4: (-50.934,98.000,169.827)
O2: (-52.643,101.001,172.663)
C6: (-50.445,98.447,173.360)
C5: (-50.308,97.908,172.136)
O3': (-52.968,97.942,177.303)
OP1: (-58.087,106.453,162.881)
OP2: (-56.639,104.402,163.218)
C3': (-57.893,106.566,167.786)
C1': (-58.438,104.606,168.925)
C5': (-59.192,105.887,165.657)
O6: (-53.711,100.997,169.115)
O4': (-59.226,104.647,167.763)
C8: (-56.922,103.244,167.466)
C2: (-55.608,102.771,171.553)
C6: (-54.590,101.730,169.573)
C5: (-55.610,102.417,168.884)
C4: (-56.489,103.189,169.590)
P: (-57.866,105.149,163.527)
C4': (-59.146,105.969,167.173)
C2': (-57.973,106.025,169.196)
O2': (-58.990,106.701,169.924)
N1: (-54.671,101.975,170.933)
N2: (-55.527,102.887,172.892)
N3: (-56.564,103.416,170.904)
N7: (-55.897,102.457,167.544)
N9: (-57.312,103.715,168.669)
O5': (-58.041,105.269,165.106)
O3': (-57.863,107.986,167.725)
OP2: (-56.639,104.402,163.218)
C3': (-57.893,106.566,167.786)
C1': (-58.438,104.606,168.925)
C5': (-59.192,105.887,165.657)
O6: (-53.711,100.997,169.115)
O4': (-59.226,104.647,167.763)
C8: (-56.922,103.244,167.466)
C2: (-55.608,102.771,171.553)
C6: (-54.590,101.730,169.573)
C5: (-55.610,102.417,168.884)
C4: (-56.489,103.189,169.590)
P: (-57.866,105.149,163.527)
C4': (-59.146,105.969,167.173)
C2': (-57.973,106.025,169.196)
O2': (-58.990,106.701,169.924)
N1: (-54.671,101.975,170.933)
N2: (-55.527,102.887,172.892)
N3: (-56.564,103.416,170.904)
N7: (-55.897,102.457,167.544)
N9: (-57.312,103.715,168.669)
O5': (-58.041,105.269,165.106)
O3': (-57.863,107.986,167.725)
Image (generated by PyMOL):