Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:A247:A273
Extra
PDB:
ATOM 1 O3' C A 246 -39.759 5.525 -34.544 1.00 37.30 O
ATOM 2 P U A 247 -38.722 4.286 -34.476 1.00 47.72 P
ATOM 3 OP1 U A 247 -39.380 3.116 -35.127 1.00 47.72 O
ATOM 4 OP2 U A 247 -38.277 4.164 -33.057 1.00 47.72 O
ATOM 5 O5' U A 247 -37.512 4.790 -35.382 1.00 47.72 O
ATOM 6 C5' U A 247 -37.643 4.861 -36.790 1.00 47.72 C
ATOM 7 C4' U A 247 -36.359 5.291 -37.444 1.00 47.72 C
ATOM 8 O4' U A 247 -35.955 6.581 -36.937 1.00 47.72 O
ATOM 9 C3' U A 247 -35.159 4.409 -37.194 1.00 47.72 C
ATOM 10 O3' U A 247 -35.149 3.278 -38.034 1.00 47.72 O
ATOM 11 C2' U A 247 -33.993 5.355 -37.441 1.00 47.72 C
ATOM 12 O2' U A 247 -33.740 5.490 -38.827 1.00 47.72 O
ATOM 13 C1' U A 247 -34.553 6.675 -36.927 1.00 47.72 C
ATOM 14 N1 U A 247 -34.123 6.975 -35.560 1.00 47.82 N
ATOM 15 C2 U A 247 -32.879 7.535 -35.384 1.00 47.82 C
ATOM 16 O2 U A 247 -32.122 7.758 -36.304 1.00 47.82 O
ATOM 17 N3 U A 247 -32.544 7.817 -34.089 1.00 47.82 N
ATOM 18 C4 U A 247 -33.326 7.617 -32.968 1.00 47.82 C
ATOM 19 O4 U A 247 -32.886 7.922 -31.853 1.00 47.82 O
ATOM 20 C5 U A 247 -34.618 7.046 -33.239 1.00 47.82 C
ATOM 21 C6 U A 247 -34.966 6.755 -34.499 1.00 47.82 C
ATOM 22 P A A 248 -34.254 2.009 -37.664 1.00 51.68 P
ATOM 23 OP1 A A 248 -35.122 0.813 -37.811 1.00 51.68 O
ATOM 24 OP2 A A 248 -33.626 2.292 -36.345 1.00 51.68 O
ATOM 25 O5' A A 248 -33.150 2.011 -38.810 1.00 51.68 O
TER
ATOM 1 O3' A B 272 -23.366 11.956 -32.077 1.00 56.17 O
ATOM 2 P G B 273 -23.330 13.520 -31.732 1.00 53.85 P
ATOM 3 OP1 G B 273 -22.051 13.783 -31.021 1.00 53.85 O
ATOM 4 OP2 G B 273 -24.610 13.842 -31.051 1.00 53.85 O
ATOM 5 O5' G B 273 -23.294 14.200 -33.166 1.00 53.85 O
ATOM 6 C5' G B 273 -24.490 14.464 -33.866 1.00 53.85 C
ATOM 7 C4' G B 273 -24.483 13.833 -35.231 1.00 53.85 C
ATOM 8 O4' G B 273 -24.428 12.382 -35.123 1.00 53.85 O
ATOM 9 C3' G B 273 -25.718 14.086 -36.053 1.00 53.85 C
ATOM 10 O3' G B 273 -25.708 15.353 -36.654 1.00 53.85 O
ATOM 11 C2' G B 273 -25.714 12.926 -37.030 1.00 53.85 C
ATOM 12 O2' G B 273 -24.743 13.121 -38.040 1.00 53.85 O
ATOM 13 C1' G B 273 -25.246 11.795 -36.121 1.00 53.85 C
ATOM 14 N9 G B 273 -26.378 11.126 -35.445 1.00 53.86 N
ATOM 15 C8 G B 273 -26.453 11.057 -34.076 1.00 53.86 C
ATOM 16 N7 G B 273 -27.519 10.448 -33.647 1.00 53.86 N
ATOM 17 C5 G B 273 -28.200 10.090 -34.793 1.00 53.86 C
ATOM 18 C6 G B 273 -29.422 9.401 -34.890 1.00 53.86 C
ATOM 19 O6 G B 273 -30.118 8.979 -33.970 1.00 53.86 O
ATOM 20 N1 G B 273 -29.802 9.220 -36.201 1.00 53.86 N
ATOM 21 C2 G B 273 -29.090 9.646 -37.279 1.00 53.86 C
ATOM 22 N2 G B 273 -29.671 9.349 -38.447 1.00 53.86 N
ATOM 23 N3 G B 273 -27.929 10.299 -37.214 1.00 53.86 N
ATOM 24 C4 G B 273 -27.527 10.492 -35.932 1.00 53.86 C
ATOM 25 P G B 274 -26.898 16.369 -36.341 1.00 36.84 P
ATOM 26 OP1 G B 274 -26.436 17.724 -36.711 1.00 36.84 O
ATOM 27 OP2 G B 274 -27.340 16.117 -34.944 1.00 36.84 O
ATOM 28 O5' G B 274 -28.001 15.887 -37.363 1.00 36.84 O
TER
ATOM 2 P U A 247 -38.722 4.286 -34.476 1.00 47.72 P
ATOM 3 OP1 U A 247 -39.380 3.116 -35.127 1.00 47.72 O
ATOM 4 OP2 U A 247 -38.277 4.164 -33.057 1.00 47.72 O
ATOM 5 O5' U A 247 -37.512 4.790 -35.382 1.00 47.72 O
ATOM 6 C5' U A 247 -37.643 4.861 -36.790 1.00 47.72 C
ATOM 7 C4' U A 247 -36.359 5.291 -37.444 1.00 47.72 C
ATOM 8 O4' U A 247 -35.955 6.581 -36.937 1.00 47.72 O
ATOM 9 C3' U A 247 -35.159 4.409 -37.194 1.00 47.72 C
ATOM 10 O3' U A 247 -35.149 3.278 -38.034 1.00 47.72 O
ATOM 11 C2' U A 247 -33.993 5.355 -37.441 1.00 47.72 C
ATOM 12 O2' U A 247 -33.740 5.490 -38.827 1.00 47.72 O
ATOM 13 C1' U A 247 -34.553 6.675 -36.927 1.00 47.72 C
ATOM 14 N1 U A 247 -34.123 6.975 -35.560 1.00 47.82 N
ATOM 15 C2 U A 247 -32.879 7.535 -35.384 1.00 47.82 C
ATOM 16 O2 U A 247 -32.122 7.758 -36.304 1.00 47.82 O
ATOM 17 N3 U A 247 -32.544 7.817 -34.089 1.00 47.82 N
ATOM 18 C4 U A 247 -33.326 7.617 -32.968 1.00 47.82 C
ATOM 19 O4 U A 247 -32.886 7.922 -31.853 1.00 47.82 O
ATOM 20 C5 U A 247 -34.618 7.046 -33.239 1.00 47.82 C
ATOM 21 C6 U A 247 -34.966 6.755 -34.499 1.00 47.82 C
ATOM 22 P A A 248 -34.254 2.009 -37.664 1.00 51.68 P
ATOM 23 OP1 A A 248 -35.122 0.813 -37.811 1.00 51.68 O
ATOM 24 OP2 A A 248 -33.626 2.292 -36.345 1.00 51.68 O
ATOM 25 O5' A A 248 -33.150 2.011 -38.810 1.00 51.68 O
TER
ATOM 1 O3' A B 272 -23.366 11.956 -32.077 1.00 56.17 O
ATOM 2 P G B 273 -23.330 13.520 -31.732 1.00 53.85 P
ATOM 3 OP1 G B 273 -22.051 13.783 -31.021 1.00 53.85 O
ATOM 4 OP2 G B 273 -24.610 13.842 -31.051 1.00 53.85 O
ATOM 5 O5' G B 273 -23.294 14.200 -33.166 1.00 53.85 O
ATOM 6 C5' G B 273 -24.490 14.464 -33.866 1.00 53.85 C
ATOM 7 C4' G B 273 -24.483 13.833 -35.231 1.00 53.85 C
ATOM 8 O4' G B 273 -24.428 12.382 -35.123 1.00 53.85 O
ATOM 9 C3' G B 273 -25.718 14.086 -36.053 1.00 53.85 C
ATOM 10 O3' G B 273 -25.708 15.353 -36.654 1.00 53.85 O
ATOM 11 C2' G B 273 -25.714 12.926 -37.030 1.00 53.85 C
ATOM 12 O2' G B 273 -24.743 13.121 -38.040 1.00 53.85 O
ATOM 13 C1' G B 273 -25.246 11.795 -36.121 1.00 53.85 C
ATOM 14 N9 G B 273 -26.378 11.126 -35.445 1.00 53.86 N
ATOM 15 C8 G B 273 -26.453 11.057 -34.076 1.00 53.86 C
ATOM 16 N7 G B 273 -27.519 10.448 -33.647 1.00 53.86 N
ATOM 17 C5 G B 273 -28.200 10.090 -34.793 1.00 53.86 C
ATOM 18 C6 G B 273 -29.422 9.401 -34.890 1.00 53.86 C
ATOM 19 O6 G B 273 -30.118 8.979 -33.970 1.00 53.86 O
ATOM 20 N1 G B 273 -29.802 9.220 -36.201 1.00 53.86 N
ATOM 21 C2 G B 273 -29.090 9.646 -37.279 1.00 53.86 C
ATOM 22 N2 G B 273 -29.671 9.349 -38.447 1.00 53.86 N
ATOM 23 N3 G B 273 -27.929 10.299 -37.214 1.00 53.86 N
ATOM 24 C4 G B 273 -27.527 10.492 -35.932 1.00 53.86 C
ATOM 25 P G B 274 -26.898 16.369 -36.341 1.00 36.84 P
ATOM 26 OP1 G B 274 -26.436 17.724 -36.711 1.00 36.84 O
ATOM 27 OP2 G B 274 -27.340 16.117 -34.944 1.00 36.84 O
ATOM 28 O5' G B 274 -28.001 15.887 -37.363 1.00 36.84 O
TER
Atoms:
C4: (-33.326,7.617,-32.968)
N3: (-32.544,7.817,-34.089)
OP1: (-39.380,3.116,-35.127)
OP2: (-38.277,4.164,-33.057)
C2: (-32.879,7.535,-35.384)
C1': (-34.553,6.675,-36.927)
C3': (-35.159,4.409,-37.194)
O5': (-37.512,4.790,-35.382)
O4': (-35.955,6.581,-36.937)
C5': (-37.643,4.861,-36.790)
P: (-38.722,4.286,-34.476)
C4': (-36.359,5.291,-37.444)
C2': (-33.993,5.355,-37.441)
O2': (-33.740,5.490,-38.827)
N1: (-34.123,6.975,-35.560)
O4: (-32.886,7.922,-31.853)
O2: (-32.122,7.758,-36.304)
C6: (-34.966,6.755,-34.499)
C5: (-34.618,7.046,-33.239)
O3': (-35.149,3.278,-38.034)
N3: (-32.544,7.817,-34.089)
OP1: (-39.380,3.116,-35.127)
OP2: (-38.277,4.164,-33.057)
C2: (-32.879,7.535,-35.384)
C1': (-34.553,6.675,-36.927)
C3': (-35.159,4.409,-37.194)
O5': (-37.512,4.790,-35.382)
O4': (-35.955,6.581,-36.937)
C5': (-37.643,4.861,-36.790)
P: (-38.722,4.286,-34.476)
C4': (-36.359,5.291,-37.444)
C2': (-33.993,5.355,-37.441)
O2': (-33.740,5.490,-38.827)
N1: (-34.123,6.975,-35.560)
O4: (-32.886,7.922,-31.853)
O2: (-32.122,7.758,-36.304)
C6: (-34.966,6.755,-34.499)
C5: (-34.618,7.046,-33.239)
O3': (-35.149,3.278,-38.034)
OP1: (-22.051,13.783,-31.021)
OP2: (-24.610,13.842,-31.051)
C3': (-25.718,14.086,-36.053)
C1': (-25.246,11.795,-36.121)
C5': (-24.490,14.464,-33.866)
O6: (-30.118,8.979,-33.970)
O4': (-24.428,12.382,-35.123)
C8: (-26.453,11.057,-34.076)
C2: (-29.090,9.646,-37.279)
C6: (-29.422,9.401,-34.890)
C5: (-28.200,10.090,-34.793)
C4: (-27.527,10.492,-35.932)
P: (-23.330,13.520,-31.732)
C4': (-24.483,13.833,-35.231)
C2': (-25.714,12.926,-37.030)
O2': (-24.743,13.121,-38.040)
N1: (-29.802,9.220,-36.201)
N2: (-29.671,9.349,-38.447)
N3: (-27.929,10.299,-37.214)
N7: (-27.519,10.448,-33.647)
N9: (-26.378,11.126,-35.445)
O5': (-23.294,14.200,-33.166)
O3': (-25.708,15.353,-36.654)
OP2: (-24.610,13.842,-31.051)
C3': (-25.718,14.086,-36.053)
C1': (-25.246,11.795,-36.121)
C5': (-24.490,14.464,-33.866)
O6: (-30.118,8.979,-33.970)
O4': (-24.428,12.382,-35.123)
C8: (-26.453,11.057,-34.076)
C2: (-29.090,9.646,-37.279)
C6: (-29.422,9.401,-34.890)
C5: (-28.200,10.090,-34.793)
C4: (-27.527,10.492,-35.932)
P: (-23.330,13.520,-31.732)
C4': (-24.483,13.833,-35.231)
C2': (-25.714,12.926,-37.030)
O2': (-24.743,13.121,-38.040)
N1: (-29.802,9.220,-36.201)
N2: (-29.671,9.349,-38.447)
N3: (-27.929,10.299,-37.214)
N7: (-27.519,10.448,-33.647)
N9: (-26.378,11.126,-35.445)
O5': (-23.294,14.200,-33.166)
O3': (-25.708,15.353,-36.654)
Image (generated by PyMOL):