ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YHQ:01077:01078

Extra

PDB:
ATOM 1 O3' A A1076 36.533 104.479 144.238 1.00 39.04 O
ATOM 2 P A A1077 38.034 104.771 144.738 1.00 40.37 P
ATOM 3 OP1 A A1077 38.442 103.708 145.695 1.00 39.09 O
ATOM 4 OP2 A A1077 38.103 106.196 145.140 1.00 37.89 O
ATOM 5 O5' A A1077 38.907 104.568 143.419 1.00 41.27 O
ATOM 6 C5' A A1077 38.739 105.435 142.288 1.00 36.81 C
ATOM 7 C4' A A1077 39.436 104.861 141.080 1.00 36.48 C
ATOM 8 O4' A A1077 38.856 103.566 140.729 1.00 36.28 O
ATOM 9 C3' A A1077 39.269 105.694 139.821 1.00 35.13 C
ATOM 10 O3' A A1077 40.109 106.815 139.729 1.00 33.46 O
ATOM 11 C2' A A1077 39.407 104.657 138.724 1.00 35.67 C
ATOM 12 O2' A A1077 40.738 104.246 138.506 1.00 35.44 O
ATOM 13 C1' A A1077 38.566 103.537 139.336 1.00 35.26 C
ATOM 14 N9 A A1077 37.144 103.851 139.172 1.00 35.39 N
ATOM 15 C8 A A1077 36.520 105.091 139.104 1.00 35.45 C
ATOM 16 N7 A A1077 35.221 105.027 138.937 1.00 32.18 N
ATOM 17 C5 A A1077 34.971 103.668 138.897 1.00 34.81 C
ATOM 18 C6 A A1077 33.797 102.951 138.747 1.00 36.17 C
ATOM 19 N6 A A1077 32.604 103.513 138.604 1.00 37.59 N
ATOM 20 N1 A A1077 33.885 101.607 138.751 1.00 42.21 N
ATOM 21 C2 A A1077 35.098 101.038 138.901 1.00 40.15 C
ATOM 22 N3 A A1077 36.279 101.607 139.059 1.00 35.57 N
ATOM 23 C4 A A1077 36.147 102.935 139.045 1.00 34.32 C
ATOM 24 P G A1078 39.447 108.248 139.456 1.00 35.03 P
ATOM 25 OP1 G A1078 40.554 109.217 139.234 1.00 36.45 O
ATOM 26 OP2 G A1078 38.438 108.521 140.515 1.00 35.89 O
ATOM 27 O5' G A1078 38.697 108.036 138.066 1.00 34.72 O
TER

ATOM 1 O3' A B1077 40.109 106.815 139.729 1.00 33.46 O
ATOM 2 P G B1078 39.447 108.248 139.456 1.00 35.03 P
ATOM 3 OP1 G B1078 40.554 109.217 139.234 1.00 36.45 O
ATOM 4 OP2 G B1078 38.438 108.521 140.515 1.00 35.89 O
ATOM 5 O5' G B1078 38.697 108.036 138.066 1.00 34.72 O
ATOM 6 C5' G B1078 37.265 108.094 137.955 1.00 30.57 C
ATOM 7 C4' G B1078 36.852 107.563 136.611 1.00 30.70 C
ATOM 8 O4' G B1078 35.404 107.516 136.501 1.00 31.51 O
ATOM 9 C3' G B1078 37.334 108.408 135.436 1.00 32.00 C
ATOM 10 O3' G B1078 37.589 107.541 134.336 1.00 31.24 O
ATOM 11 C2' G B1078 36.132 109.301 135.160 1.00 30.56 C
ATOM 12 O2' G B1078 36.096 109.814 133.845 1.00 32.62 O
ATOM 13 C1' G B1078 34.998 108.311 135.406 1.00 29.55 C
ATOM 14 N9 G B1078 33.670 108.852 135.678 1.00 26.74 N
ATOM 15 C8 G B1078 33.301 110.140 135.993 1.00 26.18 C
ATOM 16 N7 G B1078 32.007 110.284 136.105 1.00 25.13 N
ATOM 17 C5 G B1078 31.504 109.012 135.869 1.00 22.23 C
ATOM 18 C6 G B1078 30.171 108.536 135.846 1.00 23.80 C
ATOM 19 O6 G B1078 29.122 109.168 136.030 1.00 24.60 O
ATOM 20 N1 G B1078 30.124 107.172 135.576 1.00 20.93 N
ATOM 21 C2 G B1078 31.221 106.381 135.360 1.00 21.62 C
ATOM 22 N2 G B1078 31.009 105.098 135.154 1.00 21.24 N
ATOM 23 N3 G B1078 32.451 106.817 135.357 1.00 21.79 N
ATOM 24 C4 G B1078 32.521 108.125 135.620 1.00 22.47 C
ATOM 25 P U B1079 39.097 107.107 134.013 1.00 34.59 P
ATOM 26 OP1 U B1079 40.020 108.064 134.684 1.00 38.05 O
ATOM 27 OP2 U B1079 39.195 106.885 132.547 1.00 34.23 O
ATOM 28 O5' U B1079 39.266 105.705 134.726 1.00 32.06 O
TER

Atoms:
OP1: (38.442,103.708,145.695)
OP2: (38.103,106.196,145.140)
C3': (39.269,105.694,139.821)
C1': (38.566,103.537,139.336)
C5': (38.739,105.435,142.288)
O4': (38.856,103.566,140.729)
C8: (36.520,105.091,139.104)
O2': (40.738,104.246,138.506)
C6: (33.797,102.951,138.747)
C5: (34.971,103.668,138.897)
C4: (36.147,102.935,139.045)
P: (38.034,104.771,144.738)
C4': (39.436,104.861,141.080)
C2': (39.407,104.657,138.724)
C2: (35.098,101.038,138.901)
N1: (33.885,101.607,138.751)
N3: (36.279,101.607,139.059)
N6: (32.604,103.513,138.604)
N7: (35.221,105.027,138.937)
N9: (37.144,103.851,139.172)
O5': (38.907,104.568,143.419)
O3': (40.109,106.815,139.729)
OP1: (40.554,109.217,139.234)
OP2: (38.438,108.521,140.515)
C3': (37.334,108.408,135.436)
C1': (34.998,108.311,135.406)
C5': (37.265,108.094,137.955)
O6: (29.122,109.168,136.030)
O4': (35.404,107.516,136.501)
C8: (33.301,110.140,135.993)
C2: (31.221,106.381,135.360)
C6: (30.171,108.536,135.846)
C5: (31.504,109.012,135.869)
C4: (32.521,108.125,135.620)
P: (39.447,108.248,139.456)
C4': (36.852,107.563,136.611)
C2': (36.132,109.301,135.160)
O2': (36.096,109.814,133.845)
N1: (30.124,107.172,135.576)
N2: (31.009,105.098,135.154)
N3: (32.451,106.817,135.357)
N7: (32.007,110.284,136.105)
N9: (33.670,108.852,135.678)
O5': (38.697,108.036,138.066)
O3': (37.589,107.541,134.336)
Image (generated by PyMOL):
PyMOL image
show in jmol