ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQ5:02005:0525

Extra

PDB:
ATOM 1 O3' G A2004 42.994 130.664 90.334 1.00 37.51 O
ATOM 2 P U A2005 43.766 129.339 89.849 1.00 38.13 P
ATOM 3 OP1 U A2005 44.515 128.840 91.035 1.00 40.05 O
ATOM 4 OP2 U A2005 44.491 129.607 88.575 1.00 38.50 O
ATOM 5 O5' U A2005 42.621 128.269 89.588 1.00 36.75 O
ATOM 6 C5' U A2005 41.930 128.209 88.333 1.00 39.63 C
ATOM 7 C4' U A2005 40.568 127.574 88.512 1.00 37.67 C
ATOM 8 O4' U A2005 40.712 126.195 88.937 1.00 36.48 O
ATOM 9 C3' U A2005 39.691 128.187 89.585 1.00 36.62 C
ATOM 10 O3' U A2005 39.042 129.360 89.128 1.00 39.01 O
ATOM 11 C2' U A2005 38.715 127.064 89.869 1.00 35.27 C
ATOM 12 O2' U A2005 37.733 126.923 88.873 1.00 36.70 O
ATOM 13 C1' U A2005 39.637 125.855 89.788 1.00 35.64 C
ATOM 14 N1 U A2005 40.166 125.481 91.106 1.00 38.03 N
ATOM 15 C2 U A2005 39.304 124.818 91.961 1.00 38.35 C
ATOM 16 O2 U A2005 38.145 124.585 91.680 1.00 41.29 O
ATOM 17 N3 U A2005 39.849 124.441 93.158 1.00 39.72 N
ATOM 18 C4 U A2005 41.128 124.674 93.592 1.00 38.23 C
ATOM 19 O4 U A2005 41.461 124.262 94.695 1.00 40.17 O
ATOM 20 C5 U A2005 41.957 125.397 92.671 1.00 36.72 C
ATOM 21 C6 U A2005 41.463 125.763 91.487 1.00 35.94 C
ATOM 22 P A A2006 38.635 130.498 90.180 1.00 39.84 P
ATOM 23 OP1 A A2006 38.093 131.615 89.373 1.00 42.25 O
ATOM 24 OP2 A A2006 39.773 130.736 91.096 1.00 39.35 O
ATOM 25 O5' A A2006 37.464 129.848 91.046 1.00 42.30 O
TER

ATOM 1 O3' A B 524 30.557 125.176 100.761 1.00 48.96 O
ATOM 2 P G B 525 29.820 123.759 100.602 1.00 49.50 P
ATOM 3 OP1 G B 525 28.625 124.004 99.758 1.00 49.85 O
ATOM 4 OP2 G B 525 29.651 123.127 101.930 1.00 50.53 O
ATOM 5 O5' G B 525 30.868 122.900 99.768 1.00 46.14 O
ATOM 6 C5' G B 525 30.451 121.776 98.984 1.00 41.69 C
ATOM 7 C4' G B 525 30.577 122.102 97.516 1.00 41.81 C
ATOM 8 O4' G B 525 31.915 122.591 97.217 1.00 40.27 O
ATOM 9 C3' G B 525 30.344 120.932 96.566 1.00 40.63 C
ATOM 10 O3' G B 525 29.749 121.439 95.382 1.00 42.76 O
ATOM 11 C2' G B 525 31.768 120.513 96.218 1.00 39.61 C
ATOM 12 O2' G B 525 31.859 119.779 95.017 1.00 37.13 O
ATOM 13 C1' G B 525 32.418 121.886 96.103 1.00 41.22 C
ATOM 14 N9 G B 525 33.876 121.967 96.098 1.00 43.70 N
ATOM 15 C8 G B 525 34.740 121.613 97.106 1.00 44.56 C
ATOM 16 N7 G B 525 35.991 121.839 96.813 1.00 43.02 N
ATOM 17 C5 G B 525 35.953 122.367 95.532 1.00 44.55 C
ATOM 18 C6 G B 525 37.005 122.815 94.690 1.00 44.02 C
ATOM 19 O6 G B 525 38.213 122.850 94.923 1.00 43.13 O
ATOM 20 N1 G B 525 36.524 123.261 93.465 1.00 45.09 N
ATOM 21 C2 G B 525 35.203 123.286 93.098 1.00 44.77 C
ATOM 22 N2 G B 525 34.944 123.735 91.869 1.00 44.25 N
ATOM 23 N3 G B 525 34.209 122.890 93.880 1.00 45.38 N
ATOM 24 C4 G B 525 34.654 122.443 95.073 1.00 44.29 C
ATOM 25 P C B 526 28.184 121.762 95.344 1.00 40.13 P
ATOM 26 OP1 C B 526 27.473 120.755 96.160 1.00 41.80 O
ATOM 27 OP2 C B 526 27.848 121.914 93.923 1.00 44.59 O
ATOM 28 O5' C B 526 28.060 123.202 96.008 1.00 41.93 O
TER

Atoms:
C4: (41.128,124.674,93.592)
N3: (39.849,124.441,93.158)
OP1: (44.515,128.840,91.035)
OP2: (44.491,129.607,88.575)
C2: (39.304,124.818,91.961)
C1': (39.637,125.855,89.788)
C3': (39.691,128.187,89.585)
O5': (42.621,128.269,89.588)
O4': (40.712,126.195,88.937)
C5': (41.930,128.209,88.333)
P: (43.766,129.339,89.849)
C4': (40.568,127.574,88.512)
C2': (38.715,127.064,89.869)
O2': (37.733,126.923,88.873)
N1: (40.166,125.481,91.106)
O4: (41.461,124.262,94.695)
O2: (38.145,124.585,91.680)
C6: (41.463,125.763,91.487)
C5: (41.957,125.397,92.671)
O3': (39.042,129.360,89.128)
OP1: (28.625,124.004,99.758)
OP2: (29.651,123.127,101.930)
C3': (30.344,120.932,96.566)
C1': (32.418,121.886,96.103)
C5': (30.451,121.776,98.984)
O6: (38.213,122.850,94.923)
O4': (31.915,122.591,97.217)
C8: (34.740,121.613,97.106)
C2: (35.203,123.286,93.098)
C6: (37.005,122.815,94.690)
C5: (35.953,122.367,95.532)
C4: (34.654,122.443,95.073)
P: (29.820,123.759,100.602)
C4': (30.577,122.102,97.516)
C2': (31.768,120.513,96.218)
O2': (31.859,119.779,95.017)
N1: (36.524,123.261,93.465)
N2: (34.944,123.735,91.869)
N3: (34.209,122.890,93.880)
N7: (35.991,121.839,96.813)
N9: (33.876,121.967,96.098)
O5': (30.868,122.900,99.768)
O3': (29.749,121.439,95.382)
Image (generated by PyMOL):
PyMOL image
show in jmol