ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3MUR:R21:R30

Extra

PDB:
ATOM 1 O3' A A 20 17.301 -1.295 -8.211 1.00 47.30 O
ATOM 2 P U A 21 16.920 -1.642 -9.728 1.00 47.86 P
ATOM 3 OP1 U A 21 18.194 -1.856 -10.447 1.00 51.49 O
ATOM 4 OP2 U A 21 15.968 -0.643 -10.265 1.00 46.96 O
ATOM 5 O5' U A 21 16.151 -3.035 -9.584 1.00 46.78 O
ATOM 6 C5' U A 21 16.870 -4.217 -9.251 1.00 48.28 C
ATOM 7 C4' U A 21 15.911 -5.348 -8.946 1.00 49.23 C
ATOM 8 O4' U A 21 14.992 -4.955 -7.892 1.00 48.68 O
ATOM 9 C3' U A 21 14.995 -5.707 -10.099 1.00 48.93 C
ATOM 10 O3' U A 21 15.662 -6.559 -11.009 1.00 52.44 O
ATOM 11 C2' U A 21 13.857 -6.403 -9.367 1.00 47.87 C
ATOM 12 O2' U A 21 14.162 -7.736 -9.009 1.00 48.64 O
ATOM 13 C1' U A 21 13.716 -5.523 -8.129 1.00 47.17 C
ATOM 14 N1 U A 21 12.681 -4.447 -8.312 1.00 46.79 N
ATOM 15 C2 U A 21 11.337 -4.770 -8.177 1.00 44.65 C
ATOM 16 O2 U A 21 10.941 -5.888 -7.906 1.00 43.28 O
ATOM 17 N3 U A 21 10.464 -3.719 -8.371 1.00 43.18 N
ATOM 18 C4 U A 21 10.790 -2.407 -8.688 1.00 42.92 C
ATOM 19 O4 U A 21 9.902 -1.573 -8.829 1.00 44.19 O
ATOM 20 C5 U A 21 12.201 -2.145 -8.819 1.00 44.50 C
ATOM 21 C6 U A 21 13.070 -3.150 -8.629 1.00 47.08 C
ATOM 22 P U A 22 15.205 -6.605 -12.542 1.00 53.51 P
ATOM 23 OP1 U A 22 16.258 -7.329 -13.294 1.00 54.52 O
ATOM 24 OP2 U A 22 14.798 -5.242 -12.961 1.00 52.59 O
ATOM 25 O5' U A 22 13.866 -7.480 -12.489 1.00 50.06 O
TER

ATOM 1 O3' A B 29 -0.641 -6.583 -5.853 1.00 36.84 O
ATOM 2 P G B 30 0.281 -6.591 -4.544 1.00 39.15 P
ATOM 3 OP1 G B 30 -0.538 -7.101 -3.421 1.00 39.67 O
ATOM 4 OP2 G B 30 0.930 -5.272 -4.427 1.00 40.43 O
ATOM 5 O5' G B 30 1.457 -7.617 -4.887 1.00 40.30 O
ATOM 6 C5' G B 30 1.218 -9.015 -4.910 1.00 42.32 C
ATOM 7 C4' G B 30 2.462 -9.731 -5.385 1.00 43.58 C
ATOM 8 O4' G B 30 2.914 -9.177 -6.643 1.00 43.82 O
ATOM 9 C3' G B 30 3.657 -9.547 -4.476 1.00 44.13 C
ATOM 10 O3' G B 30 3.544 -10.431 -3.384 1.00 44.99 O
ATOM 11 C2' G B 30 4.807 -9.898 -5.412 1.00 45.90 C
ATOM 12 O2' G B 30 5.019 -11.288 -5.559 1.00 49.21 O
ATOM 13 C1' G B 30 4.322 -9.288 -6.727 1.00 45.50 C
ATOM 14 N9 G B 30 4.894 -7.964 -6.944 1.00 46.48 N
ATOM 15 C8 G B 30 4.231 -6.772 -7.101 1.00 44.36 C
ATOM 16 N7 G B 30 5.024 -5.751 -7.271 1.00 43.50 N
ATOM 17 C5 G B 30 6.296 -6.296 -7.218 1.00 45.42 C
ATOM 18 C6 G B 30 7.564 -5.679 -7.330 1.00 46.42 C
ATOM 19 O6 G B 30 7.823 -4.483 -7.509 1.00 47.34 O
ATOM 20 N1 G B 30 8.604 -6.599 -7.208 1.00 48.47 N
ATOM 21 C2 G B 30 8.439 -7.952 -7.008 1.00 50.54 C
ATOM 22 N2 G B 30 9.550 -8.694 -6.921 1.00 52.59 N
ATOM 23 N3 G B 30 7.259 -8.543 -6.903 1.00 50.87 N
ATOM 24 C4 G B 30 6.234 -7.657 -7.015 1.00 48.30 C
ATOM 25 P U B 31 3.876 -9.898 -1.916 1.00 44.14 P
ATOM 26 OP1 U B 31 3.413 -10.917 -0.946 1.00 45.13 O
ATOM 27 OP2 U B 31 3.393 -8.503 -1.815 1.00 41.72 O
ATOM 28 O5' U B 31 5.469 -9.869 -1.890 1.00 43.61 O
TER

Atoms:
C4: (10.790,-2.407,-8.688)
N3: (10.464,-3.719,-8.371)
OP1: (18.194,-1.856,-10.447)
OP2: (15.968,-0.643,-10.265)
C2: (11.337,-4.770,-8.177)
C1': (13.716,-5.523,-8.129)
C3': (14.995,-5.707,-10.099)
O5': (16.151,-3.035,-9.584)
O4': (14.992,-4.955,-7.892)
C5': (16.870,-4.217,-9.251)
P: (16.920,-1.642,-9.728)
C4': (15.911,-5.348,-8.946)
C2': (13.857,-6.403,-9.367)
O2': (14.162,-7.736,-9.009)
N1: (12.681,-4.447,-8.312)
O4: (9.902,-1.573,-8.829)
O2: (10.941,-5.888,-7.906)
C6: (13.070,-3.150,-8.629)
C5: (12.201,-2.145,-8.819)
O3': (15.662,-6.559,-11.009)
OP1: (-0.538,-7.101,-3.421)
OP2: (0.930,-5.272,-4.427)
C3': (3.657,-9.547,-4.476)
C1': (4.322,-9.288,-6.727)
C5': (1.218,-9.015,-4.910)
O6: (7.823,-4.483,-7.509)
O4': (2.914,-9.177,-6.643)
C8: (4.231,-6.772,-7.101)
C2: (8.439,-7.952,-7.008)
C6: (7.564,-5.679,-7.330)
C5: (6.296,-6.296,-7.218)
C4: (6.234,-7.657,-7.015)
P: (0.281,-6.591,-4.544)
C4': (2.462,-9.731,-5.385)
C2': (4.807,-9.898,-5.412)
O2': (5.019,-11.288,-5.559)
N1: (8.604,-6.599,-7.208)
N2: (9.550,-8.694,-6.921)
N3: (7.259,-8.543,-6.903)
N7: (5.024,-5.751,-7.271)
N9: (4.894,-7.964,-6.944)
O5': (1.457,-7.617,-4.887)
O3': (3.544,-10.431,-3.384)
Image (generated by PyMOL):
PyMOL image
show in jmol