ClaRNA

Doublet info:

Details

Nucleotide types: UG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQK:01023:01009

Extra

PDB:
ATOM 1 O3' G A1022 55.194 83.117 95.326 1.00 38.34 O
ATOM 2 P U A1023 53.774 83.213 94.589 1.00 38.42 P
ATOM 3 OP1 U A1023 53.961 82.776 93.181 1.00 38.56 O
ATOM 4 OP2 U A1023 53.165 84.539 94.867 1.00 42.01 O
ATOM 5 O5' U A1023 52.869 82.149 95.353 1.00 38.30 O
ATOM 6 C5' U A1023 53.330 80.813 95.599 1.00 37.32 C
ATOM 7 C4' U A1023 52.521 80.186 96.707 1.00 39.37 C
ATOM 8 O4' U A1023 52.862 80.799 97.979 1.00 39.41 O
ATOM 9 C3' U A1023 51.022 80.404 96.595 1.00 38.11 C
ATOM 10 O3' U A1023 50.430 79.512 95.677 1.00 37.99 O
ATOM 11 C2' U A1023 50.561 80.208 98.027 1.00 37.25 C
ATOM 12 O2' U A1023 50.523 78.853 98.417 1.00 38.08 O
ATOM 13 C1' U A1023 51.698 80.887 98.787 1.00 38.59 C
ATOM 14 N1 U A1023 51.415 82.302 99.068 1.00 38.96 N
ATOM 15 C2 U A1023 50.577 82.577 100.130 1.00 39.20 C
ATOM 16 O2 U A1023 50.080 81.705 100.827 1.00 40.76 O
ATOM 17 N3 U A1023 50.336 83.908 100.348 1.00 39.35 N
ATOM 18 C4 U A1023 50.833 84.972 99.630 1.00 38.59 C
ATOM 19 O4 U A1023 50.511 86.120 99.951 1.00 38.06 O
ATOM 20 C5 U A1023 51.699 84.608 98.550 1.00 38.41 C
ATOM 21 C6 U A1023 51.954 83.319 98.311 1.00 38.56 C
ATOM 22 P G A1024 49.311 80.049 94.663 1.00 41.09 P
ATOM 23 OP1 G A1024 49.280 79.080 93.548 1.00 42.15 O
ATOM 24 OP2 G A1024 49.519 81.485 94.374 1.00 40.47 O
ATOM 25 O5' G A1024 47.953 79.911 95.480 1.00 41.67 O
TER

ATOM 1 O3' C B1008 43.424 85.563 110.128 1.00 39.65 O
ATOM 2 P G B1009 44.818 84.991 110.679 1.00 39.99 P
ATOM 3 OP1 G B1009 44.580 84.622 112.095 1.00 45.22 O
ATOM 4 OP2 G B1009 45.921 85.928 110.344 1.00 43.69 O
ATOM 5 O5' G B1009 45.052 83.670 109.830 1.00 41.31 O
ATOM 6 C5' G B1009 44.147 82.569 109.920 1.00 40.26 C
ATOM 7 C4' G B1009 44.552 81.496 108.949 1.00 40.68 C
ATOM 8 O4' G B1009 44.356 81.971 107.592 1.00 39.93 O
ATOM 9 C3' G B1009 46.025 81.135 108.961 1.00 40.98 C
ATOM 10 O3' G B1009 46.385 80.304 110.054 1.00 43.57 O
ATOM 11 C2' G B1009 46.184 80.448 107.613 1.00 41.63 C
ATOM 12 O2' G B1009 45.709 79.115 107.592 1.00 41.95 O
ATOM 13 C1' G B1009 45.289 81.324 106.732 1.00 41.64 C
ATOM 14 N9 G B1009 46.068 82.326 106.006 1.00 40.13 N
ATOM 15 C8 G B1009 46.271 83.646 106.337 1.00 39.49 C
ATOM 16 N7 G B1009 47.059 84.266 105.501 1.00 39.00 N
ATOM 17 C5 G B1009 47.387 83.302 104.557 1.00 40.45 C
ATOM 18 C6 G B1009 48.218 83.379 103.407 1.00 41.01 C
ATOM 19 O6 G B1009 48.854 84.348 102.975 1.00 42.69 O
ATOM 20 N1 G B1009 48.272 82.165 102.736 1.00 40.52 N
ATOM 21 C2 G B1009 47.616 81.022 103.116 1.00 40.19 C
ATOM 22 N2 G B1009 47.795 79.947 102.335 1.00 40.75 N
ATOM 23 N3 G B1009 46.844 80.937 104.179 1.00 38.93 N
ATOM 24 C4 G B1009 46.775 82.104 104.850 1.00 39.59 C
ATOM 25 P C B1010 47.822 80.490 110.743 1.00 44.00 P
ATOM 26 OP1 C B1010 47.880 79.621 111.943 1.00 48.00 O
ATOM 27 OP2 C B1010 48.074 81.950 110.881 1.00 46.83 O
ATOM 28 O5' C B1010 48.826 79.904 109.663 1.00 44.41 O
TER

Atoms:
C4: (50.833,84.972,99.630)
N3: (50.336,83.908,100.348)
OP1: (53.961,82.776,93.181)
OP2: (53.165,84.539,94.867)
C2: (50.577,82.577,100.130)
C1': (51.698,80.887,98.787)
C3': (51.022,80.404,96.595)
O5': (52.869,82.149,95.353)
O4': (52.862,80.799,97.979)
C5': (53.330,80.813,95.599)
P: (53.774,83.213,94.589)
C4': (52.521,80.186,96.707)
C2': (50.561,80.208,98.027)
O2': (50.523,78.853,98.417)
N1: (51.415,82.302,99.068)
O4: (50.511,86.120,99.951)
O2: (50.080,81.705,100.827)
C6: (51.954,83.319,98.311)
C5: (51.699,84.608,98.550)
O3': (50.430,79.512,95.677)
OP1: (44.580,84.622,112.095)
OP2: (45.921,85.928,110.344)
C3': (46.025,81.135,108.961)
C1': (45.289,81.324,106.732)
C5': (44.147,82.569,109.920)
O6: (48.854,84.348,102.975)
O4': (44.356,81.971,107.592)
C8: (46.271,83.646,106.337)
C2: (47.616,81.022,103.116)
C6: (48.218,83.379,103.407)
C5: (47.387,83.302,104.557)
C4: (46.775,82.104,104.850)
P: (44.818,84.991,110.679)
C4': (44.552,81.496,108.949)
C2': (46.184,80.448,107.613)
O2': (45.709,79.115,107.592)
N1: (48.272,82.165,102.736)
N2: (47.795,79.947,102.335)
N3: (46.844,80.937,104.179)
N7: (47.059,84.266,105.501)
N9: (46.068,82.326,106.006)
O5': (45.052,83.670,109.830)
O3': (46.385,80.304,110.054)
Image (generated by PyMOL):
PyMOL image
show in jmol