ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1XMQ:A46:A102

Extra

PDB:
ATOM 1 O3' A A 45 148.393 62.080 0.310 1.00 61.36 O
ATOM 2 P A A 46 147.078 62.611 1.061 1.00 57.39 P
ATOM 3 OP1 A A 46 147.149 64.090 1.128 1.00 54.14 O
ATOM 4 OP2 A A 46 146.907 61.830 2.313 1.00 54.14 O
ATOM 5 O5' A A 46 145.899 62.195 0.078 1.00 57.39 O
ATOM 6 C5' A A 46 145.879 62.725 -1.236 1.00 57.39 C
ATOM 7 C4' A A 46 145.305 61.736 -2.200 1.00 57.39 C
ATOM 8 O4' A A 46 143.873 61.727 -2.040 1.00 57.39 O
ATOM 9 C3' A A 46 145.533 62.179 -3.631 1.00 57.39 C
ATOM 10 O3' A A 46 146.846 61.812 -4.118 1.00 57.39 O
ATOM 11 C2' A A 46 144.312 61.690 -4.402 1.00 57.39 C
ATOM 12 O2' A A 46 144.462 60.438 -5.037 1.00 57.39 O
ATOM 13 C1' A A 46 143.254 61.594 -3.300 1.00 57.39 C
ATOM 14 N9 A A 46 142.081 62.469 -3.356 1.00 54.14 N
ATOM 15 C8 A A 46 141.810 63.562 -2.577 1.00 54.14 C
ATOM 16 N7 A A 46 140.618 64.071 -2.778 1.00 54.14 N
ATOM 17 C5 A A 46 140.077 63.273 -3.771 1.00 54.14 C
ATOM 18 C6 A A 46 138.827 63.274 -4.404 1.00 54.14 C
ATOM 19 N6 A A 46 137.839 64.103 -4.090 1.00 54.14 N
ATOM 20 N1 A A 46 138.616 62.368 -5.373 1.00 54.14 N
ATOM 21 C2 A A 46 139.588 61.508 -5.660 1.00 54.14 C
ATOM 22 N3 A A 46 140.795 61.386 -5.117 1.00 54.14 N
ATOM 23 C4 A A 46 140.981 62.309 -4.166 1.00 54.14 C
ATOM 24 P G A 47 147.412 60.295 -3.970 1.00 48.79 P
ATOM 25 OP1 G A 47 148.641 60.255 -4.793 1.00 57.28 O
ATOM 26 OP2 G A 47 146.363 59.285 -4.187 1.00 57.28 O
ATOM 27 O5' G A 47 147.889 60.172 -2.457 1.00 48.79 O
TER

ATOM 1 O3' G B 101 136.548 65.944 5.701 1.00 39.72 O
ATOM 2 P U B 102 137.041 67.381 5.162 1.00 39.97 P
ATOM 3 OP1 U B 102 138.108 67.845 6.082 1.00 41.15 O
ATOM 4 OP2 U B 102 135.860 68.248 4.911 1.00 41.15 O
ATOM 5 O5' U B 102 137.723 67.048 3.766 1.00 39.97 O
ATOM 6 C5' U B 102 138.876 66.211 3.712 1.00 39.97 C
ATOM 7 C4' U B 102 139.097 65.730 2.307 1.00 39.97 C
ATOM 8 O4' U B 102 137.927 65.003 1.874 1.00 39.97 O
ATOM 9 C3' U B 102 139.288 66.799 1.242 1.00 39.97 C
ATOM 10 O3' U B 102 140.636 67.230 1.184 1.00 39.97 O
ATOM 11 C2' U B 102 138.889 66.052 -0.019 1.00 39.97 C
ATOM 12 O2' U B 102 139.905 65.162 -0.421 1.00 39.97 O
ATOM 13 C1' U B 102 137.736 65.197 0.489 1.00 39.97 C
ATOM 14 N1 U B 102 136.422 65.814 0.264 1.00 41.15 N
ATOM 15 C2 U B 102 135.941 65.772 -1.015 1.00 41.15 C
ATOM 16 O2 U B 102 136.581 65.307 -1.926 1.00 41.15 O
ATOM 17 N3 U B 102 134.691 66.303 -1.196 1.00 41.15 N
ATOM 18 C4 U B 102 133.894 66.880 -0.241 1.00 41.15 C
ATOM 19 O4 U B 102 132.764 67.279 -0.553 1.00 41.15 O
ATOM 20 C5 U B 102 134.478 66.917 1.070 1.00 41.15 C
ATOM 21 C6 U B 102 135.692 66.395 1.271 1.00 41.15 C
ATOM 22 P G B 103 140.971 68.740 0.765 1.00 41.39 P
ATOM 23 OP1 G B 103 142.402 68.980 1.111 1.00 38.54 O
ATOM 24 OP2 G B 103 139.934 69.620 1.317 1.00 38.54 O
ATOM 25 O5' G B 103 140.829 68.745 -0.816 1.00 41.39 O
TER

Atoms:
OP1: (147.149,64.090,1.128)
OP2: (146.907,61.830,2.313)
C3': (145.533,62.179,-3.631)
C1': (143.254,61.594,-3.300)
C5': (145.879,62.725,-1.236)
O4': (143.873,61.727,-2.040)
C8: (141.810,63.562,-2.577)
O2': (144.462,60.438,-5.037)
C6: (138.827,63.274,-4.404)
C5: (140.077,63.273,-3.771)
C4: (140.981,62.309,-4.166)
P: (147.078,62.611,1.061)
C4': (145.305,61.736,-2.200)
C2': (144.312,61.690,-4.402)
C2: (139.588,61.508,-5.660)
N1: (138.616,62.368,-5.373)
N3: (140.795,61.386,-5.117)
N6: (137.839,64.103,-4.090)
N7: (140.618,64.071,-2.778)
N9: (142.081,62.469,-3.356)
O5': (145.899,62.195,0.078)
O3': (146.846,61.812,-4.118)
C4: (133.894,66.880,-0.241)
N3: (134.691,66.303,-1.196)
OP1: (138.108,67.845,6.082)
OP2: (135.860,68.248,4.911)
C2: (135.941,65.772,-1.015)
C1': (137.736,65.197,0.489)
C3': (139.288,66.799,1.242)
O5': (137.723,67.048,3.766)
O4': (137.927,65.003,1.874)
C5': (138.876,66.211,3.712)
P: (137.041,67.381,5.162)
C4': (139.097,65.730,2.307)
C2': (138.889,66.052,-0.019)
O2': (139.905,65.162,-0.421)
N1: (136.422,65.814,0.264)
O4: (132.764,67.279,-0.553)
O2: (136.581,65.307,-1.926)
C6: (135.692,66.395,1.271)
C5: (134.478,66.917,1.070)
O3': (140.636,67.230,1.184)
Image (generated by PyMOL):
PyMOL image
show in jmol