ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJN:0910:02053

Extra

PDB:
ATOM 1 O3' A A 909 62.104 98.724 84.157 1.00 41.50 O
ATOM 2 P A A 910 62.532 100.167 84.671 1.00 41.77 P
ATOM 3 OP1 A A 910 63.846 100.541 84.098 1.00 43.06 O
ATOM 4 OP2 A A 910 62.344 100.155 86.143 1.00 41.46 O
ATOM 5 O5' A A 910 61.408 101.105 84.051 1.00 41.89 O
ATOM 6 C5' A A 910 60.023 100.856 84.341 1.00 39.47 C
ATOM 7 C4' A A 910 59.140 101.642 83.413 1.00 36.80 C
ATOM 8 O4' A A 910 59.410 103.049 83.613 1.00 35.98 O
ATOM 9 C3' A A 910 59.317 101.381 81.922 1.00 35.11 C
ATOM 10 O3' A A 910 58.050 101.561 81.294 1.00 35.34 O
ATOM 11 C2' A A 910 60.281 102.487 81.507 1.00 34.00 C
ATOM 12 O2' A A 910 60.167 102.851 80.150 1.00 32.03 O
ATOM 13 C1' A A 910 59.804 103.633 82.392 1.00 35.98 C
ATOM 14 N9 A A 910 60.797 104.661 82.690 1.00 37.17 N
ATOM 15 C8 A A 910 62.165 104.571 82.712 1.00 36.74 C
ATOM 16 N7 A A 910 62.759 105.687 83.049 1.00 37.90 N
ATOM 17 C5 A A 910 61.712 106.574 83.255 1.00 37.48 C
ATOM 18 C6 A A 910 61.677 107.922 83.638 1.00 37.27 C
ATOM 19 N6 A A 910 62.762 108.655 83.878 1.00 38.65 N
ATOM 20 N1 A A 910 60.471 108.504 83.765 1.00 37.42 N
ATOM 21 C2 A A 910 59.381 107.776 83.517 1.00 38.09 C
ATOM 22 N3 A A 910 59.284 106.508 83.147 1.00 36.81 N
ATOM 23 C4 A A 910 60.501 105.956 83.034 1.00 37.23 C
ATOM 24 P G A 911 57.167 100.280 80.882 1.00 35.96 P
ATOM 25 OP1 G A 911 55.750 100.712 80.905 1.00 35.01 O
ATOM 26 OP2 G A 911 57.585 99.086 81.684 1.00 35.67 O
ATOM 27 O5' G A 911 57.580 100.014 79.368 1.00 33.28 O
TER

ATOM 1 O3' C B2052 70.478 105.259 88.807 1.00 32.18 O
ATOM 2 P U B2053 70.960 104.854 87.334 1.00 35.28 P
ATOM 3 OP1 U B2053 71.387 103.433 87.392 1.00 34.81 O
ATOM 4 OP2 U B2053 71.905 105.888 86.852 1.00 38.04 O
ATOM 5 O5' U B2053 69.649 104.951 86.437 1.00 36.50 O
ATOM 6 C5' U B2053 68.529 104.082 86.672 1.00 37.30 C
ATOM 7 C4' U B2053 67.345 104.509 85.839 1.00 36.68 C
ATOM 8 O4' U B2053 66.836 105.781 86.309 1.00 35.62 O
ATOM 9 C3' U B2053 67.621 104.742 84.365 1.00 36.69 C
ATOM 10 O3' U B2053 67.606 103.526 83.642 1.00 36.99 O
ATOM 11 C2' U B2053 66.457 105.630 83.970 1.00 37.84 C
ATOM 12 O2' U B2053 65.267 104.882 83.835 1.00 39.29 O
ATOM 13 C1' U B2053 66.343 106.524 85.205 1.00 37.90 C
ATOM 14 N1 U B2053 67.129 107.762 85.087 1.00 39.02 N
ATOM 15 C2 U B2053 66.574 108.814 84.378 1.00 38.52 C
ATOM 16 O2 U B2053 65.494 108.745 83.828 1.00 37.89 O
ATOM 17 N3 U B2053 67.337 109.949 84.337 1.00 38.70 N
ATOM 18 C4 U B2053 68.571 110.138 84.914 1.00 40.08 C
ATOM 19 O4 U B2053 69.102 111.245 84.850 1.00 41.36 O
ATOM 20 C5 U B2053 69.088 109.000 85.609 1.00 40.20 C
ATOM 21 C6 U B2053 68.370 107.881 85.669 1.00 39.45 C
ATOM 22 P A B2054 68.327 103.438 82.215 1.00 35.98 P
ATOM 23 OP1 A B2054 68.148 102.042 81.739 1.00 37.10 O
ATOM 24 OP2 A B2054 69.694 103.997 82.337 1.00 37.11 O
ATOM 25 O5' A B2054 67.459 104.395 81.290 1.00 32.07 O
TER

Atoms:
OP1: (63.846,100.541,84.098)
OP2: (62.344,100.155,86.143)
C3': (59.317,101.381,81.922)
C1': (59.804,103.633,82.392)
C5': (60.023,100.856,84.341)
O4': (59.410,103.049,83.613)
C8: (62.165,104.571,82.712)
O2': (60.167,102.851,80.150)
C6: (61.677,107.922,83.638)
C5: (61.712,106.574,83.255)
C4: (60.501,105.956,83.034)
P: (62.532,100.167,84.671)
C4': (59.140,101.642,83.413)
C2': (60.281,102.487,81.507)
C2: (59.381,107.776,83.517)
N1: (60.471,108.504,83.765)
N3: (59.284,106.508,83.147)
N6: (62.762,108.655,83.878)
N7: (62.759,105.687,83.049)
N9: (60.797,104.661,82.690)
O5': (61.408,101.105,84.051)
O3': (58.050,101.561,81.294)
C4: (68.571,110.138,84.914)
N3: (67.337,109.949,84.337)
OP1: (71.387,103.433,87.392)
OP2: (71.905,105.888,86.852)
C2: (66.574,108.814,84.378)
C1': (66.343,106.524,85.205)
C3': (67.621,104.742,84.365)
O5': (69.649,104.951,86.437)
O4': (66.836,105.781,86.309)
C5': (68.529,104.082,86.672)
P: (70.960,104.854,87.334)
C4': (67.345,104.509,85.839)
C2': (66.457,105.630,83.970)
O2': (65.267,104.882,83.835)
N1: (67.129,107.762,85.087)
O4: (69.102,111.245,84.850)
O2: (65.494,108.745,83.828)
C6: (68.370,107.881,85.669)
C5: (69.088,109.000,85.609)
O3': (67.606,103.526,83.642)
Image (generated by PyMOL):
PyMOL image
show in jmol