ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5D:1906:12215

Extra

PDB:
ATOM 1 O3' C A 905 36.109 -21.066 63.815 1.00 43.27 O
ATOM 2 P A A 906 36.679 -19.668 64.295 1.00 35.64 P
ATOM 3 OP1 A A 906 36.045 -19.395 65.618 1.00 35.62 O
ATOM 4 OP2 A A 906 36.479 -18.694 63.170 1.00 35.60 O
ATOM 5 O5' A A 906 38.245 -19.946 64.499 1.00 35.62 O
ATOM 6 C5' A A 906 39.207 -19.496 63.554 1.00 35.59 C
ATOM 7 C4' A A 906 40.369 -18.801 64.217 1.00 35.52 C
ATOM 8 O4' A A 906 39.969 -17.453 64.537 1.00 35.44 O
ATOM 9 C3' A A 906 40.870 -19.424 65.520 1.00 35.55 C
ATOM 10 O3' A A 906 42.271 -19.312 65.620 1.00 35.54 O
ATOM 11 C2' A A 906 40.278 -18.523 66.566 1.00 35.49 C
ATOM 12 O2' A A 906 40.987 -18.491 67.800 1.00 35.50 O
ATOM 13 C1' A A 906 40.265 -17.176 65.869 1.00 35.42 C
ATOM 14 N9 A A 906 39.257 -16.286 66.424 1.00 35.38 N
ATOM 15 C8 A A 906 38.028 -16.679 66.826 1.00 35.42 C
ATOM 16 N7 A A 906 37.393 -15.744 67.458 1.00 35.39 N
ATOM 17 C5 A A 906 38.250 -14.672 67.505 1.00 35.34 C
ATOM 18 C6 A A 906 38.156 -13.360 68.053 1.00 35.30 C
ATOM 19 N6 A A 906 37.068 -12.875 68.679 1.00 35.32 N
ATOM 20 N1 A A 906 39.182 -12.519 67.931 1.00 35.27 N
ATOM 21 C2 A A 906 40.223 -13.026 67.311 1.00 35.26 C
ATOM 22 N3 A A 906 40.477 -14.231 66.769 1.00 35.29 N
ATOM 23 C4 A A 906 39.412 -15.022 66.882 1.00 35.33 C
ATOM 24 P G A 907 43.246 -20.429 65.041 1.00 33.33 P
ATOM 25 OP1 G A 907 44.387 -19.737 64.528 1.00 33.30 O
ATOM 26 OP2 G A 907 42.499 -21.265 64.135 1.00 33.40 O
ATOM 27 O5' G A 907 43.623 -21.261 66.309 1.00 33.40 O
TER

ATOM 1 O3' C B2214 28.105 -14.744 66.576 1.00 35.53 O
ATOM 2 P U B2215 28.076 -15.785 67.772 1.00 38.46 P
ATOM 3 OP1 U B2215 27.459 -17.026 67.226 1.00 38.56 O
ATOM 4 OP2 U B2215 27.441 -15.114 68.933 1.00 38.49 O
ATOM 5 O5' U B2215 29.602 -16.034 68.072 1.00 38.39 O
ATOM 6 C5' U B2215 30.468 -16.436 67.052 1.00 38.35 C
ATOM 7 C4' U B2215 31.894 -16.197 67.443 1.00 38.28 C
ATOM 8 O4' U B2215 32.163 -14.783 67.533 1.00 38.21 O
ATOM 9 C3' U B2215 32.324 -16.705 68.795 1.00 38.29 C
ATOM 10 O3' U B2215 32.534 -18.093 68.797 1.00 38.35 O
ATOM 11 C2' U B2215 33.604 -15.941 68.996 1.00 38.21 C
ATOM 12 O2' U B2215 34.589 -16.508 68.159 1.00 38.19 O
ATOM 13 C1' U B2215 33.236 -14.582 68.421 1.00 38.16 C
ATOM 14 N1 U B2215 32.821 -13.604 69.431 1.00 38.17 N
ATOM 15 C2 U B2215 33.684 -12.989 70.320 1.00 38.14 C
ATOM 16 O2 U B2215 34.833 -13.290 70.402 1.00 38.11 O
ATOM 17 N3 U B2215 33.147 -12.017 71.125 1.00 38.16 N
ATOM 18 C4 U B2215 31.836 -11.598 71.092 1.00 38.20 C
ATOM 19 O4 U B2215 31.387 -10.737 71.855 1.00 38.24 O
ATOM 20 C5 U B2215 31.031 -12.256 70.133 1.00 38.23 C
ATOM 21 C6 U B2215 31.526 -13.194 69.348 1.00 38.21 C
ATOM 22 P G B2216 32.469 -18.915 70.174 1.00 32.29 P
ATOM 23 OP1 G B2216 32.734 -20.331 69.828 1.00 32.37 O
ATOM 24 OP2 G B2216 31.177 -18.535 70.873 1.00 32.34 O
ATOM 25 O5' G B2216 33.694 -18.339 71.015 1.00 32.24 O
TER

Atoms:
OP1: (36.045,-19.395,65.618)
OP2: (36.479,-18.694,63.170)
C3': (40.870,-19.424,65.520)
C1': (40.265,-17.176,65.869)
C5': (39.207,-19.496,63.554)
O4': (39.969,-17.453,64.537)
C8: (38.028,-16.679,66.826)
O2': (40.987,-18.491,67.800)
C6: (38.156,-13.360,68.053)
C5: (38.250,-14.672,67.505)
C4: (39.412,-15.022,66.882)
P: (36.679,-19.668,64.295)
C4': (40.369,-18.801,64.217)
C2': (40.278,-18.523,66.566)
C2: (40.223,-13.026,67.311)
N1: (39.182,-12.519,67.931)
N3: (40.477,-14.231,66.769)
N6: (37.068,-12.875,68.679)
N7: (37.393,-15.744,67.458)
N9: (39.257,-16.286,66.424)
O5': (38.245,-19.946,64.499)
O3': (42.271,-19.312,65.620)
C4: (31.836,-11.598,71.092)
N3: (33.147,-12.017,71.125)
OP1: (27.459,-17.026,67.226)
OP2: (27.441,-15.114,68.933)
C2: (33.684,-12.989,70.320)
C1': (33.236,-14.582,68.421)
C3': (32.324,-16.705,68.795)
O5': (29.602,-16.034,68.072)
O4': (32.163,-14.783,67.533)
C5': (30.468,-16.436,67.052)
P: (28.076,-15.785,67.772)
C4': (31.894,-16.197,67.443)
C2': (33.604,-15.941,68.996)
O2': (34.589,-16.508,68.159)
N1: (32.821,-13.604,69.431)
O4: (31.387,-10.737,71.855)
O2: (34.833,-13.290,70.402)
C6: (31.526,-13.194,69.348)
C5: (31.031,-12.256,70.133)
O3': (32.534,-18.093,68.797)
Image (generated by PyMOL):
PyMOL image
show in jmol