ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIT:01195:01194

Extra

PDB:
ATOM 1 O3' G A1194 45.399 121.931 125.224 1.00 33.41 O
ATOM 2 P A A1195 46.441 121.048 126.056 1.00 34.34 P
ATOM 3 OP1 A A1195 46.994 121.905 127.127 1.00 34.43 O
ATOM 4 OP2 A A1195 47.361 120.370 125.103 1.00 34.59 O
ATOM 5 O5' A A1195 45.521 119.956 126.753 1.00 32.65 O
ATOM 6 C5' A A1195 44.706 119.073 125.979 1.00 30.64 C
ATOM 7 C4' A A1195 43.993 118.109 126.887 1.00 30.88 C
ATOM 8 O4' A A1195 42.988 118.816 127.657 1.00 31.91 O
ATOM 9 C3' A A1195 43.225 117.017 126.173 1.00 31.11 C
ATOM 10 O3' A A1195 44.107 115.944 125.879 1.00 31.03 O
ATOM 11 C2' A A1195 42.180 116.632 127.208 1.00 31.90 C
ATOM 12 O2' A A1195 42.719 115.818 128.225 1.00 32.60 O
ATOM 13 C1' A A1195 41.848 117.990 127.822 1.00 33.05 C
ATOM 14 N9 A A1195 40.703 118.665 127.209 1.00 35.59 N
ATOM 15 C8 A A1195 40.678 119.361 126.028 1.00 36.10 C
ATOM 16 N7 A A1195 39.523 119.919 125.768 1.00 36.69 N
ATOM 17 C5 A A1195 38.727 119.556 126.841 1.00 36.73 C
ATOM 18 C6 A A1195 37.395 119.852 127.168 1.00 37.20 C
ATOM 19 N6 A A1195 36.617 120.642 126.433 1.00 37.69 N
ATOM 20 N1 A A1195 36.890 119.315 128.297 1.00 38.06 N
ATOM 21 C2 A A1195 37.687 118.550 129.052 1.00 38.60 C
ATOM 22 N3 A A1195 38.963 118.217 128.862 1.00 38.23 N
ATOM 23 C4 A A1195 39.431 118.761 127.725 1.00 37.25 C
ATOM 24 P U A1196 43.897 115.069 124.550 1.00 35.56 P
ATOM 25 OP1 U A1196 44.953 114.021 124.560 1.00 33.21 O
ATOM 26 OP2 U A1196 43.757 115.980 123.377 1.00 33.67 O
ATOM 27 O5' U A1196 42.499 114.350 124.769 1.00 33.37 O
TER

ATOM 1 O3' U B1193 49.371 126.127 123.562 1.00 32.26 O
ATOM 2 P G B1194 49.006 126.196 125.117 1.00 31.34 P
ATOM 3 OP1 G B1194 48.488 127.566 125.366 1.00 31.14 O
ATOM 4 OP2 G B1194 50.172 125.695 125.876 1.00 29.71 O
ATOM 5 O5' G B1194 47.812 125.156 125.286 1.00 31.61 O
ATOM 6 C5' G B1194 46.504 125.443 124.776 1.00 31.60 C
ATOM 7 C4' G B1194 45.565 124.306 125.092 1.00 32.07 C
ATOM 8 O4' G B1194 44.211 124.676 124.697 1.00 32.13 O
ATOM 9 C3' G B1194 45.858 122.982 124.387 1.00 32.52 C
ATOM 10 O3' G B1194 45.399 121.931 125.224 1.00 33.41 O
ATOM 11 C2' G B1194 44.908 123.047 123.194 1.00 33.75 C
ATOM 12 O2' G B1194 44.561 121.792 122.652 1.00 35.32 O
ATOM 13 C1' G B1194 43.690 123.669 123.863 1.00 32.98 C
ATOM 14 N9 G B1194 42.699 124.248 122.972 1.00 32.93 N
ATOM 15 C8 G B1194 42.811 125.391 122.221 1.00 35.38 C
ATOM 16 N7 G B1194 41.737 125.651 121.526 1.00 36.14 N
ATOM 17 C5 G B1194 40.870 124.614 121.837 1.00 34.94 C
ATOM 18 C6 G B1194 39.556 124.354 121.384 1.00 35.60 C
ATOM 19 O6 G B1194 38.880 124.992 120.570 1.00 35.61 O
ATOM 20 N1 G B1194 39.034 123.208 121.970 1.00 36.80 N
ATOM 21 C2 G B1194 39.700 122.401 122.861 1.00 36.15 C
ATOM 22 N2 G B1194 39.017 121.339 123.312 1.00 35.63 N
ATOM 23 N3 G B1194 40.936 122.621 123.275 1.00 32.85 N
ATOM 24 C4 G B1194 41.452 123.741 122.729 1.00 33.52 C
ATOM 25 P A B1195 46.441 121.048 126.056 1.00 34.34 P
ATOM 26 OP1 A B1195 46.994 121.905 127.127 1.00 34.43 O
ATOM 27 OP2 A B1195 47.361 120.370 125.103 1.00 34.59 O
ATOM 28 O5' A B1195 45.521 119.956 126.753 1.00 32.65 O
TER

Atoms:
OP1: (46.994,121.905,127.127)
OP2: (47.361,120.370,125.103)
C3': (43.225,117.017,126.173)
C1': (41.848,117.990,127.822)
C5': (44.706,119.073,125.979)
O4': (42.988,118.816,127.657)
C8: (40.678,119.361,126.028)
O2': (42.719,115.818,128.225)
C6: (37.395,119.852,127.168)
C5: (38.727,119.556,126.841)
C4: (39.431,118.761,127.725)
P: (46.441,121.048,126.056)
C4': (43.993,118.109,126.887)
C2': (42.180,116.632,127.208)
C2: (37.687,118.550,129.052)
N1: (36.890,119.315,128.297)
N3: (38.963,118.217,128.862)
N6: (36.617,120.642,126.433)
N7: (39.523,119.919,125.768)
N9: (40.703,118.665,127.209)
O5': (45.521,119.956,126.753)
O3': (44.107,115.944,125.879)
OP1: (48.488,127.566,125.366)
OP2: (50.172,125.695,125.876)
C3': (45.858,122.982,124.387)
C1': (43.690,123.669,123.863)
C5': (46.504,125.443,124.776)
O6: (38.880,124.992,120.570)
O4': (44.211,124.676,124.697)
C8: (42.811,125.391,122.221)
C2: (39.700,122.401,122.861)
C6: (39.556,124.354,121.384)
C5: (40.870,124.614,121.837)
C4: (41.452,123.741,122.729)
P: (49.006,126.196,125.117)
C4': (45.565,124.306,125.092)
C2': (44.908,123.047,123.194)
O2': (44.561,121.792,122.652)
N1: (39.034,123.208,121.970)
N2: (39.017,121.339,123.312)
N3: (40.936,122.621,123.275)
N7: (41.737,125.651,121.526)
N9: (42.699,124.248,122.972)
O5': (47.812,125.156,125.286)
O3': (45.399,121.931,125.224)
Image (generated by PyMOL):
PyMOL image
show in jmol