ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3PDR:A150:A149

Extra

PDB:
ATOM 1 O3' G A 149 -12.928 31.284 15.368 1.00 24.86 O
ATOM 2 P A A 150 -13.577 29.940 14.776 1.00 27.70 P
ATOM 3 OP1 A A 150 -14.791 30.519 14.117 1.00 23.09 O
ATOM 4 OP2 A A 150 -13.650 28.877 15.809 1.00 27.27 O
ATOM 5 O5' A A 150 -12.526 29.506 13.679 1.00 25.82 O
ATOM 6 C5' A A 150 -12.566 30.085 12.381 1.00 25.33 C
ATOM 7 C4' A A 150 -11.682 29.313 11.429 1.00 28.07 C
ATOM 8 O4' A A 150 -10.275 29.617 11.690 1.00 24.30 O
ATOM 9 C3' A A 150 -11.801 27.787 11.507 1.00 24.63 C
ATOM 10 O3' A A 150 -11.602 27.234 10.210 1.00 25.81 O
ATOM 11 C2' A A 150 -10.587 27.405 12.345 1.00 23.83 C
ATOM 12 O2' A A 150 -10.136 26.080 12.190 1.00 26.64 O
ATOM 13 C1' A A 150 -9.586 28.388 11.756 1.00 22.03 C
ATOM 14 N9 A A 150 -8.279 28.419 12.420 1.00 25.14 N
ATOM 15 C8 A A 150 -7.951 27.964 13.672 1.00 23.82 C
ATOM 16 N7 A A 150 -6.668 28.052 13.930 1.00 23.01 N
ATOM 17 C5 A A 150 -6.120 28.580 12.765 1.00 20.77 C
ATOM 18 C6 A A 150 -4.801 28.908 12.392 1.00 20.47 C
ATOM 19 N6 A A 150 -3.739 28.753 13.179 1.00 18.62 N
ATOM 20 N1 A A 150 -4.610 29.412 11.150 1.00 20.71 N
ATOM 21 C2 A A 150 -5.660 29.566 10.336 1.00 22.41 C
ATOM 22 N3 A A 150 -6.939 29.294 10.576 1.00 20.52 N
ATOM 23 C4 A A 150 -7.096 28.782 11.815 1.00 22.90 C
ATOM 24 P U A 151 -12.854 26.725 9.339 1.00 30.25 P
ATOM 25 OP1 U A 151 -13.959 26.584 10.318 1.00 30.01 O
ATOM 26 OP2 U A 151 -12.322 25.552 8.601 1.00 28.97 O
ATOM 27 O5' U A 151 -13.140 27.943 8.355 1.00 31.57 O
TER

ATOM 1 O3' C B 148 -13.837 34.004 20.589 1.00 30.49 O
ATOM 2 P G B 149 -14.521 32.642 20.064 1.00 30.78 P
ATOM 3 OP1 G B 149 -15.802 33.049 19.446 1.00 28.96 O
ATOM 4 OP2 G B 149 -14.504 31.593 21.115 1.00 32.45 O
ATOM 5 O5' G B 149 -13.467 32.184 18.952 1.00 26.79 O
ATOM 6 C5' G B 149 -13.114 33.117 17.943 1.00 25.81 C
ATOM 7 C4' G B 149 -11.958 32.623 17.117 1.00 22.84 C
ATOM 8 O4' G B 149 -10.759 32.502 17.924 1.00 23.98 O
ATOM 9 C3' G B 149 -12.112 31.243 16.514 1.00 23.80 C
ATOM 10 O3' G B 149 -12.928 31.284 15.368 1.00 24.86 O
ATOM 11 C2' G B 149 -10.670 30.883 16.201 1.00 22.67 C
ATOM 12 O2' G B 149 -10.226 31.632 15.076 1.00 22.68 O
ATOM 13 C1' G B 149 -9.969 31.437 17.445 1.00 22.73 C
ATOM 14 N9 G B 149 -9.893 30.392 18.476 1.00 20.82 N
ATOM 15 C8 G B 149 -10.647 30.287 19.624 1.00 24.26 C
ATOM 16 N7 G B 149 -10.364 29.212 20.305 1.00 22.23 N
ATOM 17 C5 G B 149 -9.388 28.566 19.558 1.00 22.02 C
ATOM 18 C6 G B 149 -8.681 27.354 19.786 1.00 24.58 C
ATOM 19 O6 G B 149 -8.786 26.542 20.721 1.00 24.63 O
ATOM 20 N1 G B 149 -7.778 27.079 18.755 1.00 23.31 N
ATOM 21 C2 G B 149 -7.573 27.863 17.652 1.00 23.56 C
ATOM 22 N2 G B 149 -6.655 27.414 16.778 1.00 22.43 N
ATOM 23 N3 G B 149 -8.215 28.997 17.434 1.00 18.73 N
ATOM 24 C4 G B 149 -9.098 29.285 18.417 1.00 23.05 C
ATOM 25 P A B 150 -13.577 29.940 14.776 1.00 27.70 P
ATOM 26 OP1 A B 150 -14.791 30.519 14.117 1.00 23.09 O
ATOM 27 OP2 A B 150 -13.650 28.877 15.809 1.00 27.27 O
ATOM 28 O5' A B 150 -12.526 29.506 13.679 1.00 25.82 O
TER

Atoms:
OP1: (-14.791,30.519,14.117)
OP2: (-13.650,28.877,15.809)
C3': (-11.801,27.787,11.507)
C1': (-9.586,28.388,11.756)
C5': (-12.566,30.085,12.381)
O4': (-10.275,29.617,11.690)
C8: (-7.951,27.964,13.672)
O2': (-10.136,26.080,12.190)
C6: (-4.801,28.908,12.392)
C5: (-6.120,28.580,12.765)
C4: (-7.096,28.782,11.815)
P: (-13.577,29.940,14.776)
C4': (-11.682,29.313,11.429)
C2': (-10.587,27.405,12.345)
C2: (-5.660,29.566,10.336)
N1: (-4.610,29.412,11.150)
N3: (-6.939,29.294,10.576)
N6: (-3.739,28.753,13.179)
N7: (-6.668,28.052,13.930)
N9: (-8.279,28.419,12.420)
O5': (-12.526,29.506,13.679)
O3': (-11.602,27.234,10.210)
OP1: (-15.802,33.049,19.446)
OP2: (-14.504,31.593,21.115)
C3': (-12.112,31.243,16.514)
C1': (-9.969,31.437,17.445)
C5': (-13.114,33.117,17.943)
O6: (-8.786,26.542,20.721)
O4': (-10.759,32.502,17.924)
C8: (-10.647,30.287,19.624)
C2: (-7.573,27.863,17.652)
C6: (-8.681,27.354,19.786)
C5: (-9.388,28.566,19.558)
C4: (-9.098,29.285,18.417)
P: (-14.521,32.642,20.064)
C4': (-11.958,32.623,17.117)
C2': (-10.670,30.883,16.201)
O2': (-10.226,31.632,15.076)
N1: (-7.778,27.079,18.755)
N2: (-6.655,27.414,16.778)
N3: (-8.215,28.997,17.434)
N7: (-10.364,29.212,20.305)
N9: (-9.893,30.392,18.476)
O5': (-13.467,32.184,18.952)
O3': (-12.928,31.284,15.368)
Image (generated by PyMOL):
PyMOL image
show in jmol