ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3DIR:A162:A140

Extra

PDB:
ATOM 1 O3' A A 161 32.184 10.591 9.569 1.00 29.97 O
ATOM 2 P G A 162 30.679 10.056 9.648 1.00 29.98 P
ATOM 3 OP1 G A 162 30.751 8.581 9.767 1.00 29.77 O
ATOM 4 OP2 G A 162 29.879 10.716 8.587 1.00 28.57 O
ATOM 5 O5' G A 162 30.212 10.546 11.104 1.00 28.74 O
ATOM 6 C5' G A 162 31.045 10.319 12.242 1.00 25.63 C
ATOM 7 C4' G A 162 30.246 10.406 13.530 1.00 24.26 C
ATOM 8 O4' G A 162 31.117 10.486 14.690 1.00 23.60 O
ATOM 9 C3' G A 162 29.334 11.615 13.653 1.00 23.89 C
ATOM 10 O3' G A 162 28.140 11.210 14.319 1.00 23.97 O
ATOM 11 C2' G A 162 30.182 12.585 14.481 1.00 23.30 C
ATOM 12 O2' G A 162 29.408 13.584 15.121 1.00 24.30 O
ATOM 13 C1' G A 162 30.787 11.612 15.482 1.00 21.36 C
ATOM 14 N9 G A 162 32.008 12.033 16.170 1.00 18.98 N
ATOM 15 C8 G A 162 33.218 12.366 15.614 1.00 17.76 C
ATOM 16 N7 G A 162 34.130 12.681 16.493 1.00 17.28 N
ATOM 17 C5 G A 162 33.484 12.541 17.711 1.00 17.40 C
ATOM 18 C6 G A 162 33.962 12.743 19.030 1.00 17.72 C
ATOM 19 O6 G A 162 35.101 13.103 19.387 1.00 19.01 O
ATOM 20 N1 G A 162 32.978 12.487 19.989 1.00 16.63 N
ATOM 21 C2 G A 162 31.700 12.086 19.700 1.00 16.88 C
ATOM 22 N2 G A 162 30.884 11.891 20.746 1.00 17.25 N
ATOM 23 N3 G A 162 31.246 11.891 18.469 1.00 17.08 N
ATOM 24 C4 G A 162 32.186 12.133 17.529 1.00 17.52 C
ATOM 25 P A A 163 26.857 10.698 13.506 1.00 24.09 P
ATOM 26 OP1 A A 163 26.738 11.469 12.245 1.00 23.48 O
ATOM 27 OP2 A A 163 25.729 10.622 14.463 1.00 23.51 O
ATOM 28 O5' A A 163 27.297 9.212 13.131 1.00 25.65 O
TER

ATOM 1 O3' U B 139 43.581 18.207 23.250 1.00 22.70 O
ATOM 2 P G B 140 44.432 16.880 22.904 1.00 21.27 P
ATOM 3 OP1 G B 140 45.068 16.421 24.163 1.00 21.20 O
ATOM 4 OP2 G B 140 45.299 17.091 21.721 1.00 20.75 O
ATOM 5 O5' G B 140 43.245 15.895 22.485 1.00 19.89 O
ATOM 6 C5' G B 140 42.384 15.475 23.529 1.00 18.69 C
ATOM 7 C4' G B 140 41.061 14.969 23.017 1.00 18.00 C
ATOM 8 O4' G B 140 40.439 15.956 22.166 1.00 18.06 O
ATOM 9 C3' G B 140 41.125 13.744 22.129 1.00 17.61 C
ATOM 10 O3' G B 140 41.350 12.583 22.897 1.00 18.40 O
ATOM 11 C2' G B 140 39.725 13.798 21.532 1.00 17.21 C
ATOM 12 O2' G B 140 38.708 13.402 22.431 1.00 17.64 O
ATOM 13 C1' G B 140 39.614 15.291 21.226 1.00 16.65 C
ATOM 14 N9 G B 140 40.091 15.580 19.877 1.00 15.61 N
ATOM 15 C8 G B 140 41.293 16.153 19.527 1.00 15.03 C
ATOM 16 N7 G B 140 41.450 16.269 18.241 1.00 14.81 N
ATOM 17 C5 G B 140 40.284 15.739 17.715 1.00 14.27 C
ATOM 18 C6 G B 140 39.890 15.595 16.377 1.00 14.14 C
ATOM 19 O6 G B 140 40.524 15.925 15.381 1.00 15.25 O
ATOM 20 N1 G B 140 38.636 15.009 16.246 1.00 14.94 N
ATOM 21 C2 G B 140 37.845 14.605 17.302 1.00 14.93 C
ATOM 22 N2 G B 140 36.656 14.049 16.999 1.00 14.45 N
ATOM 23 N3 G B 140 38.213 14.740 18.572 1.00 14.85 N
ATOM 24 C4 G B 140 39.438 15.306 18.701 1.00 14.56 C
ATOM 25 P U B 141 42.480 11.535 22.466 1.00 19.83 P
ATOM 26 OP1 U B 141 42.706 10.674 23.653 1.00 19.31 O
ATOM 27 OP2 U B 141 43.623 12.252 21.845 1.00 19.16 O
ATOM 28 O5' U B 141 41.789 10.706 21.282 1.00 19.14 O
TER

Atoms:
OP1: (30.751,8.581,9.767)
OP2: (29.879,10.716,8.587)
C3': (29.334,11.615,13.653)
C1': (30.787,11.612,15.482)
C5': (31.045,10.319,12.242)
O6: (35.101,13.103,19.387)
O4': (31.117,10.486,14.690)
C8: (33.218,12.366,15.614)
C2: (31.700,12.086,19.700)
C6: (33.962,12.743,19.030)
C5: (33.484,12.541,17.711)
C4: (32.186,12.133,17.529)
P: (30.679,10.056,9.648)
C4': (30.246,10.406,13.530)
C2': (30.182,12.585,14.481)
O2': (29.408,13.584,15.121)
N1: (32.978,12.487,19.989)
N2: (30.884,11.891,20.746)
N3: (31.246,11.891,18.469)
N7: (34.130,12.681,16.493)
N9: (32.008,12.033,16.170)
O5': (30.212,10.546,11.104)
O3': (28.140,11.210,14.319)
OP1: (45.068,16.421,24.163)
OP2: (45.299,17.091,21.721)
C3': (41.125,13.744,22.129)
C1': (39.614,15.291,21.226)
C5': (42.384,15.475,23.529)
O6: (40.524,15.925,15.381)
O4': (40.439,15.956,22.166)
C8: (41.293,16.153,19.527)
C2: (37.845,14.605,17.302)
C6: (39.890,15.595,16.377)
C5: (40.284,15.739,17.715)
C4: (39.438,15.306,18.701)
P: (44.432,16.880,22.904)
C4': (41.061,14.969,23.017)
C2': (39.725,13.798,21.532)
O2': (38.708,13.402,22.431)
N1: (38.636,15.009,16.246)
N2: (36.656,14.049,16.999)
N3: (38.213,14.740,18.572)
N7: (41.450,16.269,18.241)
N9: (40.091,15.580,19.877)
O5': (43.245,15.895,22.485)
O3': (41.350,12.583,22.897)
Image (generated by PyMOL):
PyMOL image
show in jmol