ClaRNA

Doublet info:

Details

Nucleotide types: GG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3DIZ:A162:A140

Extra

PDB:
ATOM 1 O3' A A 161 31.239 11.258 9.281 1.00 44.32 O
ATOM 2 P G A 162 29.659 11.013 9.359 1.00 45.26 P
ATOM 3 OP1 G A 162 29.316 9.891 8.451 1.00 44.58 O
ATOM 4 OP2 G A 162 28.994 12.329 9.204 1.00 43.92 O
ATOM 5 O5' G A 162 29.451 10.459 10.853 1.00 44.27 O
ATOM 6 C5' G A 162 30.026 11.128 11.967 1.00 42.92 C
ATOM 7 C4' G A 162 29.267 10.805 13.240 1.00 42.76 C
ATOM 8 O4' G A 162 30.213 10.624 14.319 1.00 42.42 O
ATOM 9 C3' G A 162 28.296 11.873 13.731 1.00 42.98 C
ATOM 10 O3' G A 162 27.217 11.282 14.417 1.00 43.47 O
ATOM 11 C2' G A 162 29.117 12.661 14.740 1.00 42.66 C
ATOM 12 O2' G A 162 28.307 13.283 15.724 1.00 43.39 O
ATOM 13 C1' G A 162 29.958 11.546 15.352 1.00 41.69 C
ATOM 14 N9 G A 162 31.221 12.037 15.888 1.00 40.71 N
ATOM 15 C8 G A 162 32.334 12.462 15.205 1.00 40.29 C
ATOM 16 N7 G A 162 33.304 12.854 15.982 1.00 40.35 N
ATOM 17 C5 G A 162 32.796 12.683 17.265 1.00 40.69 C
ATOM 18 C6 G A 162 33.383 12.933 18.533 1.00 40.75 C
ATOM 19 O6 G A 162 34.512 13.381 18.787 1.00 40.84 O
ATOM 20 N1 G A 162 32.511 12.607 19.577 1.00 40.80 N
ATOM 21 C2 G A 162 31.235 12.109 19.415 1.00 40.47 C
ATOM 22 N2 G A 162 30.533 11.853 20.528 1.00 40.64 N
ATOM 23 N3 G A 162 30.681 11.871 18.238 1.00 39.82 N
ATOM 24 C4 G A 162 31.514 12.181 17.218 1.00 40.41 C
ATOM 25 P A A 163 25.935 10.719 13.655 1.00 44.19 P
ATOM 26 OP1 A A 163 25.783 11.428 12.357 1.00 43.81 O
ATOM 27 OP2 A A 163 24.807 10.734 14.622 1.00 44.29 O
ATOM 28 O5' A A 163 26.447 9.210 13.437 1.00 43.54 O
TER

ATOM 1 O3' U B 139 42.861 18.360 22.487 1.00 38.23 O
ATOM 2 P G B 140 43.630 17.019 22.084 1.00 37.47 P
ATOM 3 OP1 G B 140 44.423 16.599 23.265 1.00 36.51 O
ATOM 4 OP2 G B 140 44.292 17.170 20.768 1.00 37.29 O
ATOM 5 O5' G B 140 42.375 16.056 21.859 1.00 37.29 O
ATOM 6 C5' G B 140 41.609 15.669 22.994 1.00 36.81 C
ATOM 7 C4' G B 140 40.290 15.048 22.596 1.00 35.91 C
ATOM 8 O4' G B 140 39.538 15.976 21.776 1.00 35.37 O
ATOM 9 C3' G B 140 40.433 13.819 21.720 1.00 35.14 C
ATOM 10 O3' G B 140 40.754 12.656 22.461 1.00 35.01 O
ATOM 11 C2' G B 140 39.061 13.767 21.061 1.00 35.20 C
ATOM 12 O2' G B 140 38.052 13.214 21.881 1.00 35.32 O
ATOM 13 C1' G B 140 38.839 15.252 20.779 1.00 35.28 C
ATOM 14 N9 G B 140 39.374 15.590 19.464 1.00 34.74 N
ATOM 15 C8 G B 140 40.597 16.150 19.198 1.00 34.84 C
ATOM 16 N7 G B 140 40.819 16.324 17.933 1.00 34.87 N
ATOM 17 C5 G B 140 39.675 15.845 17.315 1.00 34.86 C
ATOM 18 C6 G B 140 39.351 15.773 15.939 1.00 34.56 C
ATOM 19 O6 G B 140 40.032 16.136 14.978 1.00 35.04 O
ATOM 20 N1 G B 140 38.097 15.216 15.721 1.00 34.58 N
ATOM 21 C2 G B 140 37.260 14.780 16.721 1.00 35.15 C
ATOM 22 N2 G B 140 36.091 14.268 16.315 1.00 35.64 N
ATOM 23 N3 G B 140 37.549 14.837 18.023 1.00 34.77 N
ATOM 24 C4 G B 140 38.774 15.381 18.246 1.00 34.68 C
ATOM 25 P U B 141 41.799 11.653 21.787 1.00 34.38 P
ATOM 26 OP1 U B 141 42.238 10.629 22.756 1.00 34.63 O
ATOM 27 OP2 U B 141 42.789 12.503 21.093 1.00 34.98 O
ATOM 28 O5' U B 141 40.951 10.922 20.663 1.00 35.12 O
TER

Atoms:
OP1: (29.316,9.891,8.451)
OP2: (28.994,12.329,9.204)
C3': (28.296,11.873,13.731)
C1': (29.958,11.546,15.352)
C5': (30.026,11.128,11.967)
O6: (34.512,13.381,18.787)
O4': (30.213,10.624,14.319)
C8: (32.334,12.462,15.205)
C2: (31.235,12.109,19.415)
C6: (33.383,12.933,18.533)
C5: (32.796,12.683,17.265)
C4: (31.514,12.181,17.218)
P: (29.659,11.013,9.359)
C4': (29.267,10.805,13.240)
C2': (29.117,12.661,14.740)
O2': (28.307,13.283,15.724)
N1: (32.511,12.607,19.577)
N2: (30.533,11.853,20.528)
N3: (30.681,11.871,18.238)
N7: (33.304,12.854,15.982)
N9: (31.221,12.037,15.888)
O5': (29.451,10.459,10.853)
O3': (27.217,11.282,14.417)
OP1: (44.423,16.599,23.265)
OP2: (44.292,17.170,20.768)
C3': (40.433,13.819,21.720)
C1': (38.839,15.252,20.779)
C5': (41.609,15.669,22.994)
O6: (40.032,16.136,14.978)
O4': (39.538,15.976,21.776)
C8: (40.597,16.150,19.198)
C2: (37.260,14.780,16.721)
C6: (39.351,15.773,15.939)
C5: (39.675,15.845,17.315)
C4: (38.774,15.381,18.246)
P: (43.630,17.019,22.084)
C4': (40.290,15.048,22.596)
C2': (39.061,13.767,21.061)
O2': (38.052,13.214,21.881)
N1: (38.097,15.216,15.721)
N2: (36.091,14.268,16.315)
N3: (37.549,14.837,18.023)
N7: (40.819,16.324,17.933)
N9: (39.374,15.590,19.464)
O5': (42.375,16.056,21.859)
O3': (40.754,12.656,22.461)
Image (generated by PyMOL):
PyMOL image
show in jmol