Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:070:085
Extra
PDB:
ATOM 1 O3' G A 69 27.981 154.676 21.853 1.00 52.15 O
ATOM 2 P A A 70 26.828 155.741 21.517 1.00 51.92 P
ATOM 3 OP1 A A 70 25.548 155.190 22.014 1.00 50.31 O
ATOM 4 OP2 A A 70 26.950 156.121 20.089 1.00 55.15 O
ATOM 5 O5' A A 70 27.206 157.004 22.418 1.00 52.41 O
ATOM 6 C5' A A 70 27.442 156.854 23.834 1.00 52.08 C
ATOM 7 C4' A A 70 27.924 158.151 24.446 1.00 52.51 C
ATOM 8 O4' A A 70 29.196 158.537 23.852 1.00 54.02 O
ATOM 9 C3' A A 70 27.008 159.360 24.300 1.00 52.13 C
ATOM 10 O3' A A 70 27.163 160.190 25.436 1.00 52.21 O
ATOM 11 C2' A A 70 27.621 160.096 23.115 1.00 53.38 C
ATOM 12 O2' A A 70 27.355 161.484 23.124 1.00 54.88 O
ATOM 13 C1' A A 70 29.106 159.860 23.366 1.00 53.22 C
ATOM 14 N9 A A 70 29.946 159.986 22.176 1.00 53.65 N
ATOM 15 C8 A A 70 29.699 159.522 20.908 1.00 53.92 C
ATOM 16 N7 A A 70 30.651 159.797 20.051 1.00 53.37 N
ATOM 17 C5 A A 70 31.588 160.488 20.803 1.00 53.52 C
ATOM 18 C6 A A 70 32.829 161.054 20.474 1.00 52.95 C
ATOM 19 N6 A A 70 33.357 161.017 19.251 1.00 53.15 N
ATOM 20 N1 A A 70 33.518 161.671 21.456 1.00 54.17 N
ATOM 21 C2 A A 70 32.984 161.716 22.682 1.00 55.45 C
ATOM 22 N3 A A 70 31.825 161.225 23.116 1.00 56.54 N
ATOM 23 C4 A A 70 31.167 160.613 22.114 1.00 54.63 C
ATOM 24 P G A 71 26.320 159.895 26.762 1.00 54.44 P
ATOM 25 OP1 G A 71 25.067 159.174 26.406 1.00 53.94 O
ATOM 26 OP2 G A 71 26.251 161.169 27.528 1.00 52.51 O
ATOM 27 O5' G A 71 27.236 158.868 27.559 1.00 54.82 O
TER
ATOM 1 O3' G B 84 36.633 165.515 19.293 1.00 61.57 O
ATOM 2 P A B 85 36.306 166.683 18.235 1.00 63.28 P
ATOM 3 OP1 A B 85 37.605 167.302 17.852 1.00 61.34 O
ATOM 4 OP2 A B 85 35.210 167.542 18.771 1.00 62.43 O
ATOM 5 O5' A B 85 35.707 165.883 16.995 1.00 63.92 O
ATOM 6 C5' A B 85 34.573 165.008 17.165 1.00 66.97 C
ATOM 7 C4' A B 85 33.632 165.146 15.996 1.00 69.75 C
ATOM 8 O4' A B 85 32.532 164.203 16.143 1.00 69.67 O
ATOM 9 C3' A B 85 32.994 166.525 15.844 1.00 71.81 C
ATOM 10 O3' A B 85 32.812 166.843 14.464 1.00 74.78 O
ATOM 11 C2' A B 85 31.635 166.336 16.506 1.00 71.33 C
ATOM 12 O2' A B 85 30.676 167.265 16.037 1.00 72.22 O
ATOM 13 C1' A B 85 31.304 164.900 16.094 1.00 70.60 C
ATOM 14 N9 A B 85 30.338 164.226 16.968 1.00 70.11 N
ATOM 15 C8 A B 85 29.154 163.639 16.593 1.00 68.87 C
ATOM 16 N7 A B 85 28.464 163.154 17.593 1.00 68.51 N
ATOM 17 C5 A B 85 29.247 163.432 18.705 1.00 70.29 C
ATOM 18 C6 A B 85 29.064 163.189 20.081 1.00 71.37 C
ATOM 19 N6 A B 85 27.983 162.594 20.595 1.00 72.11 N
ATOM 20 N1 A B 85 30.040 163.591 20.925 1.00 71.65 N
ATOM 21 C2 A B 85 31.118 164.197 20.414 1.00 70.89 C
ATOM 22 N3 A B 85 31.402 164.488 19.147 1.00 70.68 N
ATOM 23 C4 A B 85 30.413 164.076 18.333 1.00 70.28 C
ATOM 24 P A B 86 33.546 168.131 13.836 1.00 76.01 P
ATOM 25 OP1 A B 86 33.560 169.227 14.846 1.00 76.85 O
ATOM 26 OP2 A B 86 32.909 168.362 12.515 1.00 77.28 O
ATOM 27 O5' A B 86 35.046 167.649 13.592 1.00 73.47 O
TER
ATOM 2 P A A 70 26.828 155.741 21.517 1.00 51.92 P
ATOM 3 OP1 A A 70 25.548 155.190 22.014 1.00 50.31 O
ATOM 4 OP2 A A 70 26.950 156.121 20.089 1.00 55.15 O
ATOM 5 O5' A A 70 27.206 157.004 22.418 1.00 52.41 O
ATOM 6 C5' A A 70 27.442 156.854 23.834 1.00 52.08 C
ATOM 7 C4' A A 70 27.924 158.151 24.446 1.00 52.51 C
ATOM 8 O4' A A 70 29.196 158.537 23.852 1.00 54.02 O
ATOM 9 C3' A A 70 27.008 159.360 24.300 1.00 52.13 C
ATOM 10 O3' A A 70 27.163 160.190 25.436 1.00 52.21 O
ATOM 11 C2' A A 70 27.621 160.096 23.115 1.00 53.38 C
ATOM 12 O2' A A 70 27.355 161.484 23.124 1.00 54.88 O
ATOM 13 C1' A A 70 29.106 159.860 23.366 1.00 53.22 C
ATOM 14 N9 A A 70 29.946 159.986 22.176 1.00 53.65 N
ATOM 15 C8 A A 70 29.699 159.522 20.908 1.00 53.92 C
ATOM 16 N7 A A 70 30.651 159.797 20.051 1.00 53.37 N
ATOM 17 C5 A A 70 31.588 160.488 20.803 1.00 53.52 C
ATOM 18 C6 A A 70 32.829 161.054 20.474 1.00 52.95 C
ATOM 19 N6 A A 70 33.357 161.017 19.251 1.00 53.15 N
ATOM 20 N1 A A 70 33.518 161.671 21.456 1.00 54.17 N
ATOM 21 C2 A A 70 32.984 161.716 22.682 1.00 55.45 C
ATOM 22 N3 A A 70 31.825 161.225 23.116 1.00 56.54 N
ATOM 23 C4 A A 70 31.167 160.613 22.114 1.00 54.63 C
ATOM 24 P G A 71 26.320 159.895 26.762 1.00 54.44 P
ATOM 25 OP1 G A 71 25.067 159.174 26.406 1.00 53.94 O
ATOM 26 OP2 G A 71 26.251 161.169 27.528 1.00 52.51 O
ATOM 27 O5' G A 71 27.236 158.868 27.559 1.00 54.82 O
TER
ATOM 1 O3' G B 84 36.633 165.515 19.293 1.00 61.57 O
ATOM 2 P A B 85 36.306 166.683 18.235 1.00 63.28 P
ATOM 3 OP1 A B 85 37.605 167.302 17.852 1.00 61.34 O
ATOM 4 OP2 A B 85 35.210 167.542 18.771 1.00 62.43 O
ATOM 5 O5' A B 85 35.707 165.883 16.995 1.00 63.92 O
ATOM 6 C5' A B 85 34.573 165.008 17.165 1.00 66.97 C
ATOM 7 C4' A B 85 33.632 165.146 15.996 1.00 69.75 C
ATOM 8 O4' A B 85 32.532 164.203 16.143 1.00 69.67 O
ATOM 9 C3' A B 85 32.994 166.525 15.844 1.00 71.81 C
ATOM 10 O3' A B 85 32.812 166.843 14.464 1.00 74.78 O
ATOM 11 C2' A B 85 31.635 166.336 16.506 1.00 71.33 C
ATOM 12 O2' A B 85 30.676 167.265 16.037 1.00 72.22 O
ATOM 13 C1' A B 85 31.304 164.900 16.094 1.00 70.60 C
ATOM 14 N9 A B 85 30.338 164.226 16.968 1.00 70.11 N
ATOM 15 C8 A B 85 29.154 163.639 16.593 1.00 68.87 C
ATOM 16 N7 A B 85 28.464 163.154 17.593 1.00 68.51 N
ATOM 17 C5 A B 85 29.247 163.432 18.705 1.00 70.29 C
ATOM 18 C6 A B 85 29.064 163.189 20.081 1.00 71.37 C
ATOM 19 N6 A B 85 27.983 162.594 20.595 1.00 72.11 N
ATOM 20 N1 A B 85 30.040 163.591 20.925 1.00 71.65 N
ATOM 21 C2 A B 85 31.118 164.197 20.414 1.00 70.89 C
ATOM 22 N3 A B 85 31.402 164.488 19.147 1.00 70.68 N
ATOM 23 C4 A B 85 30.413 164.076 18.333 1.00 70.28 C
ATOM 24 P A B 86 33.546 168.131 13.836 1.00 76.01 P
ATOM 25 OP1 A B 86 33.560 169.227 14.846 1.00 76.85 O
ATOM 26 OP2 A B 86 32.909 168.362 12.515 1.00 77.28 O
ATOM 27 O5' A B 86 35.046 167.649 13.592 1.00 73.47 O
TER
Atoms:
OP1: (25.548,155.190,22.014)
OP2: (26.950,156.121,20.089)
C3': (27.008,159.360,24.300)
C1': (29.106,159.860,23.366)
C5': (27.442,156.854,23.834)
O4': (29.196,158.537,23.852)
C8: (29.699,159.522,20.908)
O2': (27.355,161.484,23.124)
C6: (32.829,161.054,20.474)
C5: (31.588,160.488,20.803)
C4: (31.167,160.613,22.114)
P: (26.828,155.741,21.517)
C4': (27.924,158.151,24.446)
C2': (27.621,160.096,23.115)
C2: (32.984,161.716,22.682)
N1: (33.518,161.671,21.456)
N3: (31.825,161.225,23.116)
N6: (33.357,161.017,19.251)
N7: (30.651,159.797,20.051)
N9: (29.946,159.986,22.176)
O5': (27.206,157.004,22.418)
O3': (27.163,160.190,25.436)
OP2: (26.950,156.121,20.089)
C3': (27.008,159.360,24.300)
C1': (29.106,159.860,23.366)
C5': (27.442,156.854,23.834)
O4': (29.196,158.537,23.852)
C8: (29.699,159.522,20.908)
O2': (27.355,161.484,23.124)
C6: (32.829,161.054,20.474)
C5: (31.588,160.488,20.803)
C4: (31.167,160.613,22.114)
P: (26.828,155.741,21.517)
C4': (27.924,158.151,24.446)
C2': (27.621,160.096,23.115)
C2: (32.984,161.716,22.682)
N1: (33.518,161.671,21.456)
N3: (31.825,161.225,23.116)
N6: (33.357,161.017,19.251)
N7: (30.651,159.797,20.051)
N9: (29.946,159.986,22.176)
O5': (27.206,157.004,22.418)
O3': (27.163,160.190,25.436)
OP1: (37.605,167.302,17.852)
OP2: (35.210,167.542,18.771)
C3': (32.994,166.525,15.844)
C1': (31.304,164.900,16.094)
C5': (34.573,165.008,17.165)
O4': (32.532,164.203,16.143)
C8: (29.154,163.639,16.593)
O2': (30.676,167.265,16.037)
C6: (29.064,163.189,20.081)
C5: (29.247,163.432,18.705)
C4: (30.413,164.076,18.333)
P: (36.306,166.683,18.235)
C4': (33.632,165.146,15.996)
C2': (31.635,166.336,16.506)
C2: (31.118,164.197,20.414)
N1: (30.040,163.591,20.925)
N3: (31.402,164.488,19.147)
N6: (27.983,162.594,20.595)
N7: (28.464,163.154,17.593)
N9: (30.338,164.226,16.968)
O5': (35.707,165.883,16.995)
O3': (32.812,166.843,14.464)
OP2: (35.210,167.542,18.771)
C3': (32.994,166.525,15.844)
C1': (31.304,164.900,16.094)
C5': (34.573,165.008,17.165)
O4': (32.532,164.203,16.143)
C8: (29.154,163.639,16.593)
O2': (30.676,167.265,16.037)
C6: (29.064,163.189,20.081)
C5: (29.247,163.432,18.705)
C4: (30.413,164.076,18.333)
P: (36.306,166.683,18.235)
C4': (33.632,165.146,15.996)
C2': (31.635,166.336,16.506)
C2: (31.118,164.197,20.414)
N1: (30.040,163.591,20.925)
N3: (31.402,164.488,19.147)
N6: (27.983,162.594,20.595)
N7: (28.464,163.154,17.593)
N9: (30.338,164.226,16.968)
O5': (35.707,165.883,16.995)
O3': (32.812,166.843,14.464)
Image (generated by PyMOL):