ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1VQO:0383:0385

Extra

PDB:
ATOM 1 O3' G A 382 78.256 92.756 40.570 1.00 39.92 O
ATOM 2 P A A 383 79.083 92.988 41.930 1.00 40.98 P
ATOM 3 OP1 A A 383 78.620 94.226 42.603 1.00 41.12 O
ATOM 4 OP2 A A 383 80.521 92.824 41.606 1.00 39.29 O
ATOM 5 O5' A A 383 78.652 91.744 42.826 1.00 43.18 O
ATOM 6 C5' A A 383 79.056 90.417 42.463 1.00 41.18 C
ATOM 7 C4' A A 383 78.114 89.394 43.053 1.00 43.00 C
ATOM 8 O4' A A 383 76.767 89.590 42.539 1.00 44.74 O
ATOM 9 C3' A A 383 78.451 87.977 42.639 1.00 42.47 C
ATOM 10 O3' A A 383 79.486 87.444 43.440 1.00 40.61 O
ATOM 11 C2' A A 383 77.121 87.258 42.794 1.00 42.25 C
ATOM 12 O2' A A 383 76.823 86.925 44.135 1.00 42.33 O
ATOM 13 C1' A A 383 76.152 88.331 42.304 1.00 42.62 C
ATOM 14 N9 A A 383 75.856 88.232 40.875 1.00 46.01 N
ATOM 15 C8 A A 383 76.145 89.153 39.895 1.00 45.02 C
ATOM 16 N7 A A 383 75.713 88.813 38.706 1.00 44.31 N
ATOM 17 C5 A A 383 75.113 87.579 38.907 1.00 46.19 C
ATOM 18 C6 A A 383 74.461 86.692 38.034 1.00 45.49 C
ATOM 19 N6 A A 383 74.294 86.927 36.732 1.00 43.68 N
ATOM 20 N1 A A 383 73.977 85.542 38.551 1.00 46.96 N
ATOM 21 C2 A A 383 74.145 85.307 39.861 1.00 47.30 C
ATOM 22 N3 A A 383 74.738 86.062 40.784 1.00 47.32 N
ATOM 23 C4 A A 383 75.205 87.200 40.237 1.00 47.42 C
ATOM 24 P U A 384 80.536 86.434 42.785 1.00 41.27 P
ATOM 25 OP1 U A 384 79.766 85.311 42.209 1.00 44.58 O
ATOM 26 OP2 U A 384 81.607 86.160 43.764 1.00 41.32 O
ATOM 27 O5' U A 384 81.128 87.254 41.560 1.00 47.48 O
TER

ATOM 1 O3' U B 384 83.941 87.815 38.317 1.00 57.09 O
ATOM 2 P A B 385 83.803 88.272 36.775 1.00 55.59 P
ATOM 3 OP1 A B 385 84.213 87.099 35.959 1.00 55.23 O
ATOM 4 OP2 A B 385 84.539 89.561 36.635 1.00 55.22 O
ATOM 5 O5' A B 385 82.268 88.553 36.459 1.00 52.31 O
ATOM 6 C5' A B 385 81.895 88.907 35.108 1.00 48.42 C
ATOM 7 C4' A B 385 80.399 88.930 34.931 1.00 46.25 C
ATOM 8 O4' A B 385 79.828 87.646 35.279 1.00 45.64 O
ATOM 9 C3' A B 385 79.628 89.931 35.768 1.00 45.79 C
ATOM 10 O3' A B 385 79.626 91.199 35.119 1.00 45.33 O
ATOM 11 C2' A B 385 78.226 89.339 35.763 1.00 45.09 C
ATOM 12 O2' A B 385 77.566 89.637 34.554 1.00 47.54 O
ATOM 13 C1' A B 385 78.525 87.837 35.797 1.00 45.04 C
ATOM 14 N9 A B 385 78.489 87.226 37.120 1.00 45.08 N
ATOM 15 C8 A B 385 78.893 87.752 38.320 1.00 45.72 C
ATOM 16 N7 A B 385 78.772 86.924 39.325 1.00 47.36 N
ATOM 17 C5 A B 385 78.243 85.778 38.749 1.00 45.67 C
ATOM 18 C6 A B 385 77.881 84.535 39.285 1.00 45.68 C
ATOM 19 N6 A B 385 78.022 84.219 40.574 1.00 41.30 N
ATOM 20 N1 A B 385 77.369 83.613 38.440 1.00 46.18 N
ATOM 21 C2 A B 385 77.243 83.928 37.145 1.00 46.47 C
ATOM 22 N3 A B 385 77.553 85.058 36.524 1.00 46.08 N
ATOM 23 C4 A B 385 78.054 85.954 37.394 1.00 45.12 C
ATOM 24 P U B 386 79.858 92.535 35.976 1.00 41.49 P
ATOM 25 OP1 U B 386 81.318 92.767 36.070 1.00 44.15 O
ATOM 26 OP2 U B 386 79.054 92.410 37.221 1.00 44.83 O
ATOM 27 O5' U B 386 79.210 93.675 35.080 1.00 40.07 O
TER

Atoms:
OP1: (78.620,94.226,42.603)
OP2: (80.521,92.824,41.606)
C3': (78.451,87.977,42.639)
C1': (76.152,88.331,42.304)
C5': (79.056,90.417,42.463)
O4': (76.767,89.590,42.539)
C8: (76.145,89.153,39.895)
O2': (76.823,86.925,44.135)
C6: (74.461,86.692,38.034)
C5: (75.113,87.579,38.907)
C4: (75.205,87.200,40.237)
P: (79.083,92.988,41.930)
C4': (78.114,89.394,43.053)
C2': (77.121,87.258,42.794)
C2: (74.145,85.307,39.861)
N1: (73.977,85.542,38.551)
N3: (74.738,86.062,40.784)
N6: (74.294,86.927,36.732)
N7: (75.713,88.813,38.706)
N9: (75.856,88.232,40.875)
O5': (78.652,91.744,42.826)
O3': (79.486,87.444,43.440)
OP1: (84.213,87.099,35.959)
OP2: (84.539,89.561,36.635)
C3': (79.628,89.931,35.768)
C1': (78.525,87.837,35.797)
C5': (81.895,88.907,35.108)
O4': (79.828,87.646,35.279)
C8: (78.893,87.752,38.320)
O2': (77.566,89.637,34.554)
C6: (77.881,84.535,39.285)
C5: (78.243,85.778,38.749)
C4: (78.054,85.954,37.394)
P: (83.803,88.272,36.775)
C4': (80.399,88.930,34.931)
C2': (78.226,89.339,35.763)
C2: (77.243,83.928,37.145)
N1: (77.369,83.613,38.440)
N3: (77.553,85.058,36.524)
N6: (78.022,84.219,40.574)
N7: (78.772,86.924,39.325)
N9: (78.489,87.226,37.120)
O5': (82.268,88.553,36.459)
O3': (79.626,91.199,35.119)
Image (generated by PyMOL):
PyMOL image
show in jmol