Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:070:085
Extra
PDB:
ATOM 1 O3' G A 69 27.805 154.655 21.905 1.00 48.10 O
ATOM 2 P A A 70 26.714 155.782 21.561 1.00 50.49 P
ATOM 3 OP1 A A 70 25.384 155.312 22.031 1.00 49.89 O
ATOM 4 OP2 A A 70 26.892 156.177 20.139 1.00 53.42 O
ATOM 5 O5' A A 70 27.149 157.020 22.465 1.00 50.28 O
ATOM 6 C5' A A 70 27.315 156.877 23.884 1.00 48.88 C
ATOM 7 C4' A A 70 27.775 158.179 24.495 1.00 48.83 C
ATOM 8 O4' A A 70 29.049 158.566 23.909 1.00 48.64 O
ATOM 9 C3' A A 70 26.850 159.376 24.310 1.00 48.47 C
ATOM 10 O3' A A 70 26.999 160.243 25.422 1.00 49.51 O
ATOM 11 C2' A A 70 27.461 160.078 23.105 1.00 49.33 C
ATOM 12 O2' A A 70 27.153 161.456 23.064 1.00 51.71 O
ATOM 13 C1' A A 70 28.946 159.873 23.386 1.00 48.45 C
ATOM 14 N9 A A 70 29.833 159.984 22.231 1.00 47.65 N
ATOM 15 C8 A A 70 29.685 159.442 20.981 1.00 47.63 C
ATOM 16 N7 A A 70 30.674 159.714 20.167 1.00 47.45 N
ATOM 17 C5 A A 70 31.530 160.493 20.930 1.00 47.90 C
ATOM 18 C6 A A 70 32.765 161.102 20.643 1.00 47.43 C
ATOM 19 N6 A A 70 33.368 161.026 19.456 1.00 46.20 N
ATOM 20 N1 A A 70 33.363 161.804 21.630 1.00 47.75 N
ATOM 21 C2 A A 70 32.751 161.891 22.816 1.00 48.97 C
ATOM 22 N3 A A 70 31.587 161.370 23.205 1.00 50.61 N
ATOM 23 C4 A A 70 31.022 160.671 22.203 1.00 49.06 C
ATOM 24 P G A 71 26.215 159.937 26.782 1.00 52.35 P
ATOM 25 OP1 G A 71 24.958 159.205 26.458 1.00 51.70 O
ATOM 26 OP2 G A 71 26.155 161.200 27.556 1.00 49.24 O
ATOM 27 O5' G A 71 27.173 158.916 27.540 1.00 52.48 O
TER
ATOM 1 O3' G B 84 36.583 165.446 19.339 1.00 58.43 O
ATOM 2 P A B 85 36.260 166.648 18.320 1.00 58.17 P
ATOM 3 OP1 A B 85 37.564 167.248 17.933 1.00 56.08 O
ATOM 4 OP2 A B 85 35.198 167.509 18.911 1.00 56.76 O
ATOM 5 O5' A B 85 35.619 165.909 17.062 1.00 60.41 O
ATOM 6 C5' A B 85 34.452 165.070 17.212 1.00 62.38 C
ATOM 7 C4' A B 85 33.564 165.197 15.998 1.00 64.55 C
ATOM 8 O4' A B 85 32.462 164.250 16.089 1.00 65.24 O
ATOM 9 C3' A B 85 32.927 166.568 15.815 1.00 66.57 C
ATOM 10 O3' A B 85 32.798 166.858 14.428 1.00 68.69 O
ATOM 11 C2' A B 85 31.551 166.379 16.440 1.00 67.03 C
ATOM 12 O2' A B 85 30.587 167.297 15.958 1.00 68.05 O
ATOM 13 C1' A B 85 31.234 164.945 16.020 1.00 66.50 C
ATOM 14 N9 A B 85 30.260 164.261 16.873 1.00 67.35 N
ATOM 15 C8 A B 85 29.100 163.651 16.464 1.00 67.08 C
ATOM 16 N7 A B 85 28.405 163.123 17.440 1.00 67.17 N
ATOM 17 C5 A B 85 29.158 163.398 18.572 1.00 68.30 C
ATOM 18 C6 A B 85 28.957 163.108 19.931 1.00 68.91 C
ATOM 19 N6 A B 85 27.898 162.438 20.394 1.00 69.14 N
ATOM 20 N1 A B 85 29.892 163.534 20.810 1.00 68.77 N
ATOM 21 C2 A B 85 30.955 164.201 20.341 1.00 67.97 C
ATOM 22 N3 A B 85 31.257 164.531 19.087 1.00 68.27 N
ATOM 23 C4 A B 85 30.305 164.098 18.239 1.00 68.33 C
ATOM 24 P A B 86 33.560 168.129 13.805 1.00 69.43 P
ATOM 25 OP1 A B 86 33.538 169.239 14.799 1.00 68.39 O
ATOM 26 OP2 A B 86 32.966 168.336 12.459 1.00 70.15 O
ATOM 27 O5' A B 86 35.066 167.632 13.625 1.00 66.61 O
TER
ATOM 2 P A A 70 26.714 155.782 21.561 1.00 50.49 P
ATOM 3 OP1 A A 70 25.384 155.312 22.031 1.00 49.89 O
ATOM 4 OP2 A A 70 26.892 156.177 20.139 1.00 53.42 O
ATOM 5 O5' A A 70 27.149 157.020 22.465 1.00 50.28 O
ATOM 6 C5' A A 70 27.315 156.877 23.884 1.00 48.88 C
ATOM 7 C4' A A 70 27.775 158.179 24.495 1.00 48.83 C
ATOM 8 O4' A A 70 29.049 158.566 23.909 1.00 48.64 O
ATOM 9 C3' A A 70 26.850 159.376 24.310 1.00 48.47 C
ATOM 10 O3' A A 70 26.999 160.243 25.422 1.00 49.51 O
ATOM 11 C2' A A 70 27.461 160.078 23.105 1.00 49.33 C
ATOM 12 O2' A A 70 27.153 161.456 23.064 1.00 51.71 O
ATOM 13 C1' A A 70 28.946 159.873 23.386 1.00 48.45 C
ATOM 14 N9 A A 70 29.833 159.984 22.231 1.00 47.65 N
ATOM 15 C8 A A 70 29.685 159.442 20.981 1.00 47.63 C
ATOM 16 N7 A A 70 30.674 159.714 20.167 1.00 47.45 N
ATOM 17 C5 A A 70 31.530 160.493 20.930 1.00 47.90 C
ATOM 18 C6 A A 70 32.765 161.102 20.643 1.00 47.43 C
ATOM 19 N6 A A 70 33.368 161.026 19.456 1.00 46.20 N
ATOM 20 N1 A A 70 33.363 161.804 21.630 1.00 47.75 N
ATOM 21 C2 A A 70 32.751 161.891 22.816 1.00 48.97 C
ATOM 22 N3 A A 70 31.587 161.370 23.205 1.00 50.61 N
ATOM 23 C4 A A 70 31.022 160.671 22.203 1.00 49.06 C
ATOM 24 P G A 71 26.215 159.937 26.782 1.00 52.35 P
ATOM 25 OP1 G A 71 24.958 159.205 26.458 1.00 51.70 O
ATOM 26 OP2 G A 71 26.155 161.200 27.556 1.00 49.24 O
ATOM 27 O5' G A 71 27.173 158.916 27.540 1.00 52.48 O
TER
ATOM 1 O3' G B 84 36.583 165.446 19.339 1.00 58.43 O
ATOM 2 P A B 85 36.260 166.648 18.320 1.00 58.17 P
ATOM 3 OP1 A B 85 37.564 167.248 17.933 1.00 56.08 O
ATOM 4 OP2 A B 85 35.198 167.509 18.911 1.00 56.76 O
ATOM 5 O5' A B 85 35.619 165.909 17.062 1.00 60.41 O
ATOM 6 C5' A B 85 34.452 165.070 17.212 1.00 62.38 C
ATOM 7 C4' A B 85 33.564 165.197 15.998 1.00 64.55 C
ATOM 8 O4' A B 85 32.462 164.250 16.089 1.00 65.24 O
ATOM 9 C3' A B 85 32.927 166.568 15.815 1.00 66.57 C
ATOM 10 O3' A B 85 32.798 166.858 14.428 1.00 68.69 O
ATOM 11 C2' A B 85 31.551 166.379 16.440 1.00 67.03 C
ATOM 12 O2' A B 85 30.587 167.297 15.958 1.00 68.05 O
ATOM 13 C1' A B 85 31.234 164.945 16.020 1.00 66.50 C
ATOM 14 N9 A B 85 30.260 164.261 16.873 1.00 67.35 N
ATOM 15 C8 A B 85 29.100 163.651 16.464 1.00 67.08 C
ATOM 16 N7 A B 85 28.405 163.123 17.440 1.00 67.17 N
ATOM 17 C5 A B 85 29.158 163.398 18.572 1.00 68.30 C
ATOM 18 C6 A B 85 28.957 163.108 19.931 1.00 68.91 C
ATOM 19 N6 A B 85 27.898 162.438 20.394 1.00 69.14 N
ATOM 20 N1 A B 85 29.892 163.534 20.810 1.00 68.77 N
ATOM 21 C2 A B 85 30.955 164.201 20.341 1.00 67.97 C
ATOM 22 N3 A B 85 31.257 164.531 19.087 1.00 68.27 N
ATOM 23 C4 A B 85 30.305 164.098 18.239 1.00 68.33 C
ATOM 24 P A B 86 33.560 168.129 13.805 1.00 69.43 P
ATOM 25 OP1 A B 86 33.538 169.239 14.799 1.00 68.39 O
ATOM 26 OP2 A B 86 32.966 168.336 12.459 1.00 70.15 O
ATOM 27 O5' A B 86 35.066 167.632 13.625 1.00 66.61 O
TER
Atoms:
OP1: (25.384,155.312,22.031)
OP2: (26.892,156.177,20.139)
C3': (26.850,159.376,24.310)
C1': (28.946,159.873,23.386)
C5': (27.315,156.877,23.884)
O4': (29.049,158.566,23.909)
C8: (29.685,159.442,20.981)
O2': (27.153,161.456,23.064)
C6: (32.765,161.102,20.643)
C5: (31.530,160.493,20.930)
C4: (31.022,160.671,22.203)
P: (26.714,155.782,21.561)
C4': (27.775,158.179,24.495)
C2': (27.461,160.078,23.105)
C2: (32.751,161.891,22.816)
N1: (33.363,161.804,21.630)
N3: (31.587,161.370,23.205)
N6: (33.368,161.026,19.456)
N7: (30.674,159.714,20.167)
N9: (29.833,159.984,22.231)
O5': (27.149,157.020,22.465)
O3': (26.999,160.243,25.422)
OP2: (26.892,156.177,20.139)
C3': (26.850,159.376,24.310)
C1': (28.946,159.873,23.386)
C5': (27.315,156.877,23.884)
O4': (29.049,158.566,23.909)
C8: (29.685,159.442,20.981)
O2': (27.153,161.456,23.064)
C6: (32.765,161.102,20.643)
C5: (31.530,160.493,20.930)
C4: (31.022,160.671,22.203)
P: (26.714,155.782,21.561)
C4': (27.775,158.179,24.495)
C2': (27.461,160.078,23.105)
C2: (32.751,161.891,22.816)
N1: (33.363,161.804,21.630)
N3: (31.587,161.370,23.205)
N6: (33.368,161.026,19.456)
N7: (30.674,159.714,20.167)
N9: (29.833,159.984,22.231)
O5': (27.149,157.020,22.465)
O3': (26.999,160.243,25.422)
OP1: (37.564,167.248,17.933)
OP2: (35.198,167.509,18.911)
C3': (32.927,166.568,15.815)
C1': (31.234,164.945,16.020)
C5': (34.452,165.070,17.212)
O4': (32.462,164.250,16.089)
C8: (29.100,163.651,16.464)
O2': (30.587,167.297,15.958)
C6: (28.957,163.108,19.931)
C5: (29.158,163.398,18.572)
C4: (30.305,164.098,18.239)
P: (36.260,166.648,18.320)
C4': (33.564,165.197,15.998)
C2': (31.551,166.379,16.440)
C2: (30.955,164.201,20.341)
N1: (29.892,163.534,20.810)
N3: (31.257,164.531,19.087)
N6: (27.898,162.438,20.394)
N7: (28.405,163.123,17.440)
N9: (30.260,164.261,16.873)
O5': (35.619,165.909,17.062)
O3': (32.798,166.858,14.428)
OP2: (35.198,167.509,18.911)
C3': (32.927,166.568,15.815)
C1': (31.234,164.945,16.020)
C5': (34.452,165.070,17.212)
O4': (32.462,164.250,16.089)
C8: (29.100,163.651,16.464)
O2': (30.587,167.297,15.958)
C6: (28.957,163.108,19.931)
C5: (29.158,163.398,18.572)
C4: (30.305,164.098,18.239)
P: (36.260,166.648,18.320)
C4': (33.564,165.197,15.998)
C2': (31.551,166.379,16.440)
C2: (30.955,164.201,20.341)
N1: (29.892,163.534,20.810)
N3: (31.257,164.531,19.087)
N6: (27.898,162.438,20.394)
N7: (28.405,163.123,17.440)
N9: (30.260,164.261,16.873)
O5': (35.619,165.909,17.062)
O3': (32.798,166.858,14.428)
Image (generated by PyMOL):