ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIT:955:956

Extra

PDB:
ATOM 1 O3' U A 54 65.849 12.084 113.225 1.00 80.00 O
ATOM 2 P A A 55 66.209 12.404 114.755 1.00 80.08 P
ATOM 3 OP1 A A 55 65.895 11.188 115.546 1.00 80.29 O
ATOM 4 OP2 A A 55 65.587 13.703 115.127 1.00 81.47 O
ATOM 5 O5' A A 55 67.790 12.587 114.752 1.00 78.46 O
ATOM 6 C5' A A 55 68.483 13.029 115.941 1.00 76.11 C
ATOM 7 C4' A A 55 69.663 13.900 115.571 1.00 74.69 C
ATOM 8 O4' A A 55 70.589 13.133 114.763 1.00 74.06 O
ATOM 9 C3' A A 55 69.341 15.120 114.723 1.00 73.93 C
ATOM 10 O3' A A 55 68.939 16.218 115.534 1.00 72.96 O
ATOM 11 C2' A A 55 70.664 15.390 114.020 1.00 73.87 C
ATOM 12 O2' A A 55 71.586 16.085 114.834 1.00 74.10 O
ATOM 13 C1' A A 55 71.165 13.967 113.771 1.00 73.02 C
ATOM 14 N9 A A 55 70.796 13.431 112.461 1.00 71.69 N
ATOM 15 C8 A A 55 69.868 12.457 112.181 1.00 70.81 C
ATOM 16 N7 A A 55 69.773 12.165 110.908 1.00 70.61 N
ATOM 17 C5 A A 55 70.696 13.007 110.304 1.00 70.69 C
ATOM 18 C6 A A 55 71.077 13.186 108.963 1.00 70.32 C
ATOM 19 N6 A A 55 70.556 12.493 107.946 1.00 69.24 N
ATOM 20 N1 A A 55 72.024 14.113 108.698 1.00 70.02 N
ATOM 21 C2 A A 55 72.545 14.808 109.720 1.00 70.24 C
ATOM 22 N3 A A 55 72.271 14.729 111.021 1.00 70.16 N
ATOM 23 C4 A A 55 71.328 13.799 111.249 1.00 71.01 C
ATOM 24 P A A 56 67.677 17.112 115.105 1.00 72.94 P
ATOM 25 OP1 A A 56 67.301 17.905 116.300 1.00 73.47 O
ATOM 26 OP2 A A 56 66.661 16.243 114.451 1.00 71.27 O
ATOM 27 O5' A A 56 68.259 18.106 114.005 1.00 72.70 O
TER

ATOM 1 O3' A B 55 68.939 16.218 115.534 1.00 72.96 O
ATOM 2 P A B 56 67.677 17.112 115.105 1.00 72.94 P
ATOM 3 OP1 A B 56 67.301 17.905 116.300 1.00 73.47 O
ATOM 4 OP2 A B 56 66.661 16.243 114.451 1.00 71.27 O
ATOM 5 O5' A B 56 68.259 18.106 114.005 1.00 72.70 O
ATOM 6 C5' A B 56 68.841 17.601 112.793 1.00 71.30 C
ATOM 7 C4' A B 56 69.662 18.667 112.115 1.00 69.16 C
ATOM 8 O4' A B 56 70.607 18.019 111.229 1.00 69.29 O
ATOM 9 C3' A B 56 68.907 19.639 111.216 1.00 68.77 C
ATOM 10 O3' A B 56 68.336 20.739 111.922 1.00 66.11 O
ATOM 11 C2' A B 56 70.004 20.115 110.279 1.00 70.04 C
ATOM 12 O2' A B 56 70.804 21.107 110.886 1.00 72.06 O
ATOM 13 C1' A B 56 70.821 18.832 110.088 1.00 70.13 C
ATOM 14 N9 A B 56 70.431 18.075 108.896 1.00 69.84 N
ATOM 15 C8 A B 56 70.859 18.282 107.605 1.00 70.87 C
ATOM 16 N7 A B 56 70.308 17.478 106.727 1.00 69.39 N
ATOM 17 C5 A B 56 69.467 16.683 107.489 1.00 68.79 C
ATOM 18 C6 A B 56 68.595 15.643 107.146 1.00 68.28 C
ATOM 19 N6 A B 56 68.404 15.226 105.893 1.00 66.42 N
ATOM 20 N1 A B 56 67.911 15.042 108.147 1.00 69.14 N
ATOM 21 C2 A B 56 68.095 15.479 109.406 1.00 68.85 C
ATOM 22 N3 A B 56 68.879 16.458 109.851 1.00 67.45 N
ATOM 23 C4 A B 56 69.544 17.027 108.831 1.00 68.87 C
ATOM 24 P G B 57 66.903 21.323 111.473 1.00 65.49 P
ATOM 25 OP1 G B 57 66.765 22.665 112.088 1.00 64.72 O
ATOM 26 OP2 G B 57 65.870 20.294 111.733 1.00 66.76 O
ATOM 27 O5' G B 57 67.013 21.499 109.893 1.00 64.38 O
TER

Atoms:
OP1: (65.895,11.188,115.546)
OP2: (65.587,13.703,115.127)
C3': (69.341,15.120,114.723)
C1': (71.165,13.967,113.771)
C5': (68.483,13.029,115.941)
O4': (70.589,13.133,114.763)
C8: (69.868,12.457,112.181)
O2': (71.586,16.085,114.834)
C6: (71.077,13.186,108.963)
C5: (70.696,13.007,110.304)
C4: (71.328,13.799,111.249)
P: (66.209,12.404,114.755)
C4': (69.663,13.900,115.571)
C2': (70.664,15.390,114.020)
C2: (72.545,14.808,109.720)
N1: (72.024,14.113,108.698)
N3: (72.271,14.729,111.021)
N6: (70.556,12.493,107.946)
N7: (69.773,12.165,110.908)
N9: (70.796,13.431,112.461)
O5': (67.790,12.587,114.752)
O3': (68.939,16.218,115.534)
OP1: (67.301,17.905,116.300)
OP2: (66.661,16.243,114.451)
C3': (68.907,19.639,111.216)
C1': (70.821,18.832,110.088)
C5': (68.841,17.601,112.793)
O4': (70.607,18.019,111.229)
C8: (70.859,18.282,107.605)
O2': (70.804,21.107,110.886)
C6: (68.595,15.643,107.146)
C5: (69.467,16.683,107.489)
C4: (69.544,17.027,108.831)
P: (67.677,17.112,115.105)
C4': (69.662,18.667,112.115)
C2': (70.004,20.115,110.279)
C2: (68.095,15.479,109.406)
N1: (67.911,15.042,108.147)
N3: (68.879,16.458,109.851)
N6: (68.404,15.226,105.893)
N7: (70.308,17.478,106.727)
N9: (70.431,18.075,108.896)
O5': (68.259,18.106,114.005)
O3': (68.336,20.739,111.922)
Image (generated by PyMOL):
PyMOL image
show in jmol