Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1ZCI:A8:B8
Extra
PDB:
ATOM 1 O3' A A 7 3.696 4.480 -39.678 1.00 39.82 O
ATOM 2 P A A 8 2.509 3.880 -38.789 1.00 42.22 P
ATOM 3 OP1 A A 8 2.430 4.658 -37.522 1.00 44.22 O
ATOM 4 OP2 A A 8 2.637 2.394 -38.739 1.00 42.53 O
ATOM 5 O5' A A 8 1.236 4.223 -39.667 1.00 42.46 O
ATOM 6 C5' A A 8 1.100 5.521 -40.260 1.00 40.31 C
ATOM 7 C4' A A 8 -0.123 5.547 -41.125 1.00 38.59 C
ATOM 8 O4' A A 8 0.133 4.770 -42.329 1.00 38.75 O
ATOM 9 C3' A A 8 -1.313 4.892 -40.440 1.00 37.67 C
ATOM 10 O3' A A 8 -2.535 5.493 -40.812 1.00 35.66 O
ATOM 11 C2' A A 8 -1.264 3.472 -40.976 1.00 37.66 C
ATOM 12 O2' A A 8 -2.516 2.826 -40.945 1.00 38.22 O
ATOM 13 C1' A A 8 -0.794 3.709 -42.408 1.00 38.46 C
ATOM 14 N9 A A 8 -0.127 2.532 -42.957 1.00 39.45 N
ATOM 15 C8 A A 8 0.626 1.607 -42.272 1.00 39.69 C
ATOM 16 N7 A A 8 1.041 0.611 -43.014 1.00 40.07 N
ATOM 17 C5 A A 8 0.542 0.905 -44.275 1.00 39.60 C
ATOM 18 C6 A A 8 0.624 0.231 -45.503 1.00 38.48 C
ATOM 19 N6 A A 8 1.244 -0.939 -45.660 1.00 38.93 N
ATOM 20 N1 A A 8 0.034 0.800 -46.575 1.00 38.99 N
ATOM 21 C2 A A 8 -0.606 1.962 -46.409 1.00 38.00 C
ATOM 22 N3 A A 8 -0.767 2.686 -45.303 1.00 40.27 N
ATOM 23 C4 A A 8 -0.162 2.095 -44.258 1.00 39.06 C
ATOM 24 P G A 9 -3.687 5.655 -39.711 1.00 32.77 P
ATOM 25 OP1 G A 9 -3.669 4.434 -38.856 1.00 34.80 O
ATOM 26 OP2 G A 9 -4.941 6.031 -40.423 1.00 32.09 O
ATOM 27 O5' G A 9 -3.186 6.879 -38.830 1.00 34.02 O
TER
ATOM 1 O3' A B 7 -6.537 -4.345 -39.684 1.00 40.37 O
ATOM 2 P A B 8 -5.372 -3.725 -38.794 1.00 42.83 P
ATOM 3 OP1 A B 8 -5.488 -4.493 -37.458 1.00 45.90 O
ATOM 4 OP2 A B 8 -5.249 -2.211 -38.805 1.00 43.19 O
ATOM 5 O5' A B 8 -4.088 -4.105 -39.603 1.00 42.09 O
ATOM 6 C5' A B 8 -3.951 -5.375 -40.245 1.00 39.32 C
ATOM 7 C4' A B 8 -2.732 -5.311 -41.114 1.00 37.87 C
ATOM 8 O4' A B 8 -3.060 -4.518 -42.275 1.00 37.36 O
ATOM 9 C3' A B 8 -1.561 -4.580 -40.434 1.00 37.58 C
ATOM 10 O3' A B 8 -0.299 -5.032 -40.840 1.00 35.83 O
ATOM 11 C2' A B 8 -1.631 -3.193 -40.992 1.00 37.57 C
ATOM 12 O2' A B 8 -0.387 -2.498 -40.982 1.00 38.25 O
ATOM 13 C1' A B 8 -2.124 -3.493 -42.402 1.00 38.40 C
ATOM 14 N9 A B 8 -2.773 -2.313 -42.952 1.00 38.58 N
ATOM 15 C8 A B 8 -3.438 -1.314 -42.263 1.00 38.51 C
ATOM 16 N7 A B 8 -3.799 -0.307 -43.032 1.00 38.63 N
ATOM 17 C5 A B 8 -3.389 -0.699 -44.315 1.00 37.36 C
ATOM 18 C6 A B 8 -3.516 -0.079 -45.568 1.00 36.34 C
ATOM 19 N6 A B 8 -4.091 1.103 -45.733 1.00 36.50 N
ATOM 20 N1 A B 8 -3.034 -0.728 -46.657 1.00 36.85 N
ATOM 21 C2 A B 8 -2.470 -1.920 -46.461 1.00 35.29 C
ATOM 22 N3 A B 8 -2.299 -2.598 -45.343 1.00 36.79 N
ATOM 23 C4 A B 8 -2.782 -1.923 -44.287 1.00 37.04 C
ATOM 24 P G B 9 0.728 -5.435 -39.694 1.00 34.93 P
ATOM 25 OP1 G B 9 0.757 -4.305 -38.722 1.00 36.01 O
ATOM 26 OP2 G B 9 1.962 -5.829 -40.346 1.00 32.65 O
ATOM 27 O5' G B 9 0.042 -6.621 -38.913 1.00 34.94 O
TER
ATOM 2 P A A 8 2.509 3.880 -38.789 1.00 42.22 P
ATOM 3 OP1 A A 8 2.430 4.658 -37.522 1.00 44.22 O
ATOM 4 OP2 A A 8 2.637 2.394 -38.739 1.00 42.53 O
ATOM 5 O5' A A 8 1.236 4.223 -39.667 1.00 42.46 O
ATOM 6 C5' A A 8 1.100 5.521 -40.260 1.00 40.31 C
ATOM 7 C4' A A 8 -0.123 5.547 -41.125 1.00 38.59 C
ATOM 8 O4' A A 8 0.133 4.770 -42.329 1.00 38.75 O
ATOM 9 C3' A A 8 -1.313 4.892 -40.440 1.00 37.67 C
ATOM 10 O3' A A 8 -2.535 5.493 -40.812 1.00 35.66 O
ATOM 11 C2' A A 8 -1.264 3.472 -40.976 1.00 37.66 C
ATOM 12 O2' A A 8 -2.516 2.826 -40.945 1.00 38.22 O
ATOM 13 C1' A A 8 -0.794 3.709 -42.408 1.00 38.46 C
ATOM 14 N9 A A 8 -0.127 2.532 -42.957 1.00 39.45 N
ATOM 15 C8 A A 8 0.626 1.607 -42.272 1.00 39.69 C
ATOM 16 N7 A A 8 1.041 0.611 -43.014 1.00 40.07 N
ATOM 17 C5 A A 8 0.542 0.905 -44.275 1.00 39.60 C
ATOM 18 C6 A A 8 0.624 0.231 -45.503 1.00 38.48 C
ATOM 19 N6 A A 8 1.244 -0.939 -45.660 1.00 38.93 N
ATOM 20 N1 A A 8 0.034 0.800 -46.575 1.00 38.99 N
ATOM 21 C2 A A 8 -0.606 1.962 -46.409 1.00 38.00 C
ATOM 22 N3 A A 8 -0.767 2.686 -45.303 1.00 40.27 N
ATOM 23 C4 A A 8 -0.162 2.095 -44.258 1.00 39.06 C
ATOM 24 P G A 9 -3.687 5.655 -39.711 1.00 32.77 P
ATOM 25 OP1 G A 9 -3.669 4.434 -38.856 1.00 34.80 O
ATOM 26 OP2 G A 9 -4.941 6.031 -40.423 1.00 32.09 O
ATOM 27 O5' G A 9 -3.186 6.879 -38.830 1.00 34.02 O
TER
ATOM 1 O3' A B 7 -6.537 -4.345 -39.684 1.00 40.37 O
ATOM 2 P A B 8 -5.372 -3.725 -38.794 1.00 42.83 P
ATOM 3 OP1 A B 8 -5.488 -4.493 -37.458 1.00 45.90 O
ATOM 4 OP2 A B 8 -5.249 -2.211 -38.805 1.00 43.19 O
ATOM 5 O5' A B 8 -4.088 -4.105 -39.603 1.00 42.09 O
ATOM 6 C5' A B 8 -3.951 -5.375 -40.245 1.00 39.32 C
ATOM 7 C4' A B 8 -2.732 -5.311 -41.114 1.00 37.87 C
ATOM 8 O4' A B 8 -3.060 -4.518 -42.275 1.00 37.36 O
ATOM 9 C3' A B 8 -1.561 -4.580 -40.434 1.00 37.58 C
ATOM 10 O3' A B 8 -0.299 -5.032 -40.840 1.00 35.83 O
ATOM 11 C2' A B 8 -1.631 -3.193 -40.992 1.00 37.57 C
ATOM 12 O2' A B 8 -0.387 -2.498 -40.982 1.00 38.25 O
ATOM 13 C1' A B 8 -2.124 -3.493 -42.402 1.00 38.40 C
ATOM 14 N9 A B 8 -2.773 -2.313 -42.952 1.00 38.58 N
ATOM 15 C8 A B 8 -3.438 -1.314 -42.263 1.00 38.51 C
ATOM 16 N7 A B 8 -3.799 -0.307 -43.032 1.00 38.63 N
ATOM 17 C5 A B 8 -3.389 -0.699 -44.315 1.00 37.36 C
ATOM 18 C6 A B 8 -3.516 -0.079 -45.568 1.00 36.34 C
ATOM 19 N6 A B 8 -4.091 1.103 -45.733 1.00 36.50 N
ATOM 20 N1 A B 8 -3.034 -0.728 -46.657 1.00 36.85 N
ATOM 21 C2 A B 8 -2.470 -1.920 -46.461 1.00 35.29 C
ATOM 22 N3 A B 8 -2.299 -2.598 -45.343 1.00 36.79 N
ATOM 23 C4 A B 8 -2.782 -1.923 -44.287 1.00 37.04 C
ATOM 24 P G B 9 0.728 -5.435 -39.694 1.00 34.93 P
ATOM 25 OP1 G B 9 0.757 -4.305 -38.722 1.00 36.01 O
ATOM 26 OP2 G B 9 1.962 -5.829 -40.346 1.00 32.65 O
ATOM 27 O5' G B 9 0.042 -6.621 -38.913 1.00 34.94 O
TER
Atoms:
OP1: (2.430,4.658,-37.522)
OP2: (2.637,2.394,-38.739)
C3': (-1.313,4.892,-40.440)
C1': (-0.794,3.709,-42.408)
C5': (1.100,5.521,-40.260)
O4': (0.133,4.770,-42.329)
C8: (0.626,1.607,-42.272)
O2': (-2.516,2.826,-40.945)
C6: (0.624,0.231,-45.503)
C5: (0.542,0.905,-44.275)
C4: (-0.162,2.095,-44.258)
P: (2.509,3.880,-38.789)
C4': (-0.123,5.547,-41.125)
C2': (-1.264,3.472,-40.976)
C2: (-0.606,1.962,-46.409)
N1: (0.034,0.800,-46.575)
N3: (-0.767,2.686,-45.303)
N6: (1.244,-0.939,-45.660)
N7: (1.041,0.611,-43.014)
N9: (-0.127,2.532,-42.957)
O5': (1.236,4.223,-39.667)
O3': (-2.535,5.493,-40.812)
OP2: (2.637,2.394,-38.739)
C3': (-1.313,4.892,-40.440)
C1': (-0.794,3.709,-42.408)
C5': (1.100,5.521,-40.260)
O4': (0.133,4.770,-42.329)
C8: (0.626,1.607,-42.272)
O2': (-2.516,2.826,-40.945)
C6: (0.624,0.231,-45.503)
C5: (0.542,0.905,-44.275)
C4: (-0.162,2.095,-44.258)
P: (2.509,3.880,-38.789)
C4': (-0.123,5.547,-41.125)
C2': (-1.264,3.472,-40.976)
C2: (-0.606,1.962,-46.409)
N1: (0.034,0.800,-46.575)
N3: (-0.767,2.686,-45.303)
N6: (1.244,-0.939,-45.660)
N7: (1.041,0.611,-43.014)
N9: (-0.127,2.532,-42.957)
O5': (1.236,4.223,-39.667)
O3': (-2.535,5.493,-40.812)
OP1: (-5.488,-4.493,-37.458)
OP2: (-5.249,-2.211,-38.805)
C3': (-1.561,-4.580,-40.434)
C1': (-2.124,-3.493,-42.402)
C5': (-3.951,-5.375,-40.245)
O4': (-3.060,-4.518,-42.275)
C8: (-3.438,-1.314,-42.263)
O2': (-0.387,-2.498,-40.982)
C6: (-3.516,-0.079,-45.568)
C5: (-3.389,-0.699,-44.315)
C4: (-2.782,-1.923,-44.287)
P: (-5.372,-3.725,-38.794)
C4': (-2.732,-5.311,-41.114)
C2': (-1.631,-3.193,-40.992)
C2: (-2.470,-1.920,-46.461)
N1: (-3.034,-0.728,-46.657)
N3: (-2.299,-2.598,-45.343)
N6: (-4.091,1.103,-45.733)
N7: (-3.799,-0.307,-43.032)
N9: (-2.773,-2.313,-42.952)
O5': (-4.088,-4.105,-39.603)
O3': (-0.299,-5.032,-40.840)
OP2: (-5.249,-2.211,-38.805)
C3': (-1.561,-4.580,-40.434)
C1': (-2.124,-3.493,-42.402)
C5': (-3.951,-5.375,-40.245)
O4': (-3.060,-4.518,-42.275)
C8: (-3.438,-1.314,-42.263)
O2': (-0.387,-2.498,-40.982)
C6: (-3.516,-0.079,-45.568)
C5: (-3.389,-0.699,-44.315)
C4: (-2.782,-1.923,-44.287)
P: (-5.372,-3.725,-38.794)
C4': (-2.732,-5.311,-41.114)
C2': (-1.631,-3.193,-40.992)
C2: (-2.470,-1.920,-46.461)
N1: (-3.034,-0.728,-46.657)
N3: (-2.299,-2.598,-45.343)
N6: (-4.091,1.103,-45.733)
N7: (-3.799,-0.307,-43.032)
N9: (-2.773,-2.313,-42.952)
O5': (-4.088,-4.105,-39.603)
O3': (-0.299,-5.032,-40.840)
Image (generated by PyMOL):