Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:11906:11907
Extra
PDB:
ATOM 1 O3' C A1905 -1.239 69.304 123.930 1.00165.00 O
ATOM 2 P A A1906 -0.782 69.664 122.433 1.00138.41 P
ATOM 3 OP1 A A1906 0.637 70.094 122.496 1.00138.40 O
ATOM 4 OP2 A A1906 -1.791 70.606 121.887 1.00138.90 O
ATOM 5 O5' A A1906 -0.891 68.256 121.695 1.00137.43 O
ATOM 6 C5' A A1906 -0.225 67.115 122.216 1.00136.91 C
ATOM 7 C4' A A1906 -0.833 65.820 121.722 1.00136.19 C
ATOM 8 O4' A A1906 -2.237 65.738 122.089 1.00136.54 O
ATOM 9 C3' A A1906 -0.864 65.611 120.221 1.00135.57 C
ATOM 10 O3' A A1906 0.400 65.293 119.665 1.00135.00 O
ATOM 11 C2' A A1906 -1.908 64.499 120.081 1.00135.17 C
ATOM 12 O2' A A1906 -1.362 63.237 120.451 1.00134.57 O
ATOM 13 C1' A A1906 -2.916 64.911 121.153 1.00135.93 C
ATOM 14 N9 A A1906 -4.065 65.647 120.586 1.00136.33 N
ATOM 15 C8 A A1906 -4.287 66.998 120.496 1.00137.03 C
ATOM 16 N7 A A1906 -5.433 67.290 119.931 1.00137.22 N
ATOM 17 C5 A A1906 -6.011 66.058 119.627 1.00136.61 C
ATOM 18 C6 A A1906 -7.236 65.669 119.020 1.00136.47 C
ATOM 19 N6 A A1906 -8.167 66.518 118.573 1.00136.96 N
ATOM 20 N1 A A1906 -7.484 64.343 118.874 1.00135.82 N
ATOM 21 C2 A A1906 -6.570 63.462 119.309 1.00135.33 C
ATOM 22 N3 A A1906 -5.396 63.701 119.895 1.00135.40 N
ATOM 23 C4 A A1906 -5.168 65.033 120.025 1.00136.05 C
ATOM 24 P A A1907 0.563 65.186 118.071 1.00164.56 P
ATOM 25 OP1 A A1907 1.980 65.486 117.757 1.00164.36 O
ATOM 26 OP2 A A1907 -0.500 66.037 117.464 1.00164.99 O
ATOM 27 O5' A A1907 0.255 63.643 117.790 1.00163.77 O
TER
ATOM 1 O3' A B1906 0.400 65.293 119.665 1.00135.00 O
ATOM 2 P A B1907 0.563 65.186 118.071 1.00164.56 P
ATOM 3 OP1 A B1907 1.980 65.486 117.757 1.00164.36 O
ATOM 4 OP2 A B1907 -0.500 66.037 117.464 1.00164.99 O
ATOM 5 O5' A B1907 0.255 63.643 117.790 1.00163.77 O
ATOM 6 C5' A B1907 -0.224 63.217 116.525 1.00163.24 C
ATOM 7 C4' A B1907 -1.085 61.980 116.634 1.00162.84 C
ATOM 8 O4' A B1907 -2.245 62.248 117.477 1.00163.46 O
ATOM 9 C3' A B1907 -1.705 61.494 115.333 1.00162.33 C
ATOM 10 O3' A B1907 -0.800 60.795 114.497 1.00161.57 O
ATOM 11 C2' A B1907 -2.873 60.664 115.832 1.00162.31 C
ATOM 12 O2' A B1907 -2.412 59.450 116.401 1.00161.84 O
ATOM 13 C1' A B1907 -3.377 61.562 116.962 1.00163.19 C
ATOM 14 N9 A B1907 -4.365 62.557 116.465 1.00163.71 N
ATOM 15 C8 A B1907 -5.597 62.229 115.931 1.00163.64 C
ATOM 16 N7 A B1907 -6.311 63.251 115.512 1.00164.15 N
ATOM 17 C5 A B1907 -5.497 64.346 115.764 1.00164.59 C
ATOM 18 C6 A B1907 -5.697 65.720 115.539 1.00165.25 C
ATOM 19 N6 A B1907 -6.814 66.197 114.995 1.00165.56 N
ATOM 20 N1 A B1907 -4.715 66.584 115.893 1.00165.59 N
ATOM 21 C2 A B1907 -3.599 66.081 116.439 1.00165.28 C
ATOM 22 N3 A B1907 -3.297 64.806 116.700 1.00164.66 N
ATOM 23 C4 A B1907 -4.289 63.952 116.336 1.00164.33 C
ATOM 24 P C B1908 -0.013 61.582 113.325 1.00130.79 P
ATOM 25 OP1 C B1908 1.333 61.926 113.852 1.00130.87 O
ATOM 26 OP2 C B1908 -0.900 62.682 112.847 1.00131.34 O
ATOM 27 O5' C B1908 0.124 60.488 112.196 1.00129.92 O
TER
ATOM 2 P A A1906 -0.782 69.664 122.433 1.00138.41 P
ATOM 3 OP1 A A1906 0.637 70.094 122.496 1.00138.40 O
ATOM 4 OP2 A A1906 -1.791 70.606 121.887 1.00138.90 O
ATOM 5 O5' A A1906 -0.891 68.256 121.695 1.00137.43 O
ATOM 6 C5' A A1906 -0.225 67.115 122.216 1.00136.91 C
ATOM 7 C4' A A1906 -0.833 65.820 121.722 1.00136.19 C
ATOM 8 O4' A A1906 -2.237 65.738 122.089 1.00136.54 O
ATOM 9 C3' A A1906 -0.864 65.611 120.221 1.00135.57 C
ATOM 10 O3' A A1906 0.400 65.293 119.665 1.00135.00 O
ATOM 11 C2' A A1906 -1.908 64.499 120.081 1.00135.17 C
ATOM 12 O2' A A1906 -1.362 63.237 120.451 1.00134.57 O
ATOM 13 C1' A A1906 -2.916 64.911 121.153 1.00135.93 C
ATOM 14 N9 A A1906 -4.065 65.647 120.586 1.00136.33 N
ATOM 15 C8 A A1906 -4.287 66.998 120.496 1.00137.03 C
ATOM 16 N7 A A1906 -5.433 67.290 119.931 1.00137.22 N
ATOM 17 C5 A A1906 -6.011 66.058 119.627 1.00136.61 C
ATOM 18 C6 A A1906 -7.236 65.669 119.020 1.00136.47 C
ATOM 19 N6 A A1906 -8.167 66.518 118.573 1.00136.96 N
ATOM 20 N1 A A1906 -7.484 64.343 118.874 1.00135.82 N
ATOM 21 C2 A A1906 -6.570 63.462 119.309 1.00135.33 C
ATOM 22 N3 A A1906 -5.396 63.701 119.895 1.00135.40 N
ATOM 23 C4 A A1906 -5.168 65.033 120.025 1.00136.05 C
ATOM 24 P A A1907 0.563 65.186 118.071 1.00164.56 P
ATOM 25 OP1 A A1907 1.980 65.486 117.757 1.00164.36 O
ATOM 26 OP2 A A1907 -0.500 66.037 117.464 1.00164.99 O
ATOM 27 O5' A A1907 0.255 63.643 117.790 1.00163.77 O
TER
ATOM 1 O3' A B1906 0.400 65.293 119.665 1.00135.00 O
ATOM 2 P A B1907 0.563 65.186 118.071 1.00164.56 P
ATOM 3 OP1 A B1907 1.980 65.486 117.757 1.00164.36 O
ATOM 4 OP2 A B1907 -0.500 66.037 117.464 1.00164.99 O
ATOM 5 O5' A B1907 0.255 63.643 117.790 1.00163.77 O
ATOM 6 C5' A B1907 -0.224 63.217 116.525 1.00163.24 C
ATOM 7 C4' A B1907 -1.085 61.980 116.634 1.00162.84 C
ATOM 8 O4' A B1907 -2.245 62.248 117.477 1.00163.46 O
ATOM 9 C3' A B1907 -1.705 61.494 115.333 1.00162.33 C
ATOM 10 O3' A B1907 -0.800 60.795 114.497 1.00161.57 O
ATOM 11 C2' A B1907 -2.873 60.664 115.832 1.00162.31 C
ATOM 12 O2' A B1907 -2.412 59.450 116.401 1.00161.84 O
ATOM 13 C1' A B1907 -3.377 61.562 116.962 1.00163.19 C
ATOM 14 N9 A B1907 -4.365 62.557 116.465 1.00163.71 N
ATOM 15 C8 A B1907 -5.597 62.229 115.931 1.00163.64 C
ATOM 16 N7 A B1907 -6.311 63.251 115.512 1.00164.15 N
ATOM 17 C5 A B1907 -5.497 64.346 115.764 1.00164.59 C
ATOM 18 C6 A B1907 -5.697 65.720 115.539 1.00165.25 C
ATOM 19 N6 A B1907 -6.814 66.197 114.995 1.00165.56 N
ATOM 20 N1 A B1907 -4.715 66.584 115.893 1.00165.59 N
ATOM 21 C2 A B1907 -3.599 66.081 116.439 1.00165.28 C
ATOM 22 N3 A B1907 -3.297 64.806 116.700 1.00164.66 N
ATOM 23 C4 A B1907 -4.289 63.952 116.336 1.00164.33 C
ATOM 24 P C B1908 -0.013 61.582 113.325 1.00130.79 P
ATOM 25 OP1 C B1908 1.333 61.926 113.852 1.00130.87 O
ATOM 26 OP2 C B1908 -0.900 62.682 112.847 1.00131.34 O
ATOM 27 O5' C B1908 0.124 60.488 112.196 1.00129.92 O
TER
Atoms:
OP1: (0.637,70.094,122.496)
OP2: (-1.791,70.606,121.887)
C3': (-0.864,65.611,120.221)
C1': (-2.916,64.911,121.153)
C5': (-0.225,67.115,122.216)
O4': (-2.237,65.738,122.089)
C8: (-4.287,66.998,120.496)
O2': (-1.362,63.237,120.451)
C6: (-7.236,65.669,119.020)
C5: (-6.011,66.058,119.627)
C4: (-5.168,65.033,120.025)
P: (-0.782,69.664,122.433)
C4': (-0.833,65.820,121.722)
C2': (-1.908,64.499,120.081)
C2: (-6.570,63.462,119.309)
N1: (-7.484,64.343,118.874)
N3: (-5.396,63.701,119.895)
N6: (-8.167,66.518,118.573)
N7: (-5.433,67.290,119.931)
N9: (-4.065,65.647,120.586)
O5': (-0.891,68.256,121.695)
O3': (0.400,65.293,119.665)
OP2: (-1.791,70.606,121.887)
C3': (-0.864,65.611,120.221)
C1': (-2.916,64.911,121.153)
C5': (-0.225,67.115,122.216)
O4': (-2.237,65.738,122.089)
C8: (-4.287,66.998,120.496)
O2': (-1.362,63.237,120.451)
C6: (-7.236,65.669,119.020)
C5: (-6.011,66.058,119.627)
C4: (-5.168,65.033,120.025)
P: (-0.782,69.664,122.433)
C4': (-0.833,65.820,121.722)
C2': (-1.908,64.499,120.081)
C2: (-6.570,63.462,119.309)
N1: (-7.484,64.343,118.874)
N3: (-5.396,63.701,119.895)
N6: (-8.167,66.518,118.573)
N7: (-5.433,67.290,119.931)
N9: (-4.065,65.647,120.586)
O5': (-0.891,68.256,121.695)
O3': (0.400,65.293,119.665)
OP1: (1.980,65.486,117.757)
OP2: (-0.500,66.037,117.464)
C3': (-1.705,61.494,115.333)
C1': (-3.377,61.562,116.962)
C5': (-0.224,63.217,116.525)
O4': (-2.245,62.248,117.477)
C8: (-5.597,62.229,115.931)
O2': (-2.412,59.450,116.401)
C6: (-5.697,65.720,115.539)
C5: (-5.497,64.346,115.764)
C4: (-4.289,63.952,116.336)
P: (0.563,65.186,118.071)
C4': (-1.085,61.980,116.634)
C2': (-2.873,60.664,115.832)
C2: (-3.599,66.081,116.439)
N1: (-4.715,66.584,115.893)
N3: (-3.297,64.806,116.700)
N6: (-6.814,66.197,114.995)
N7: (-6.311,63.251,115.512)
N9: (-4.365,62.557,116.465)
O5': (0.255,63.643,117.790)
O3': (-0.800,60.795,114.497)
OP2: (-0.500,66.037,117.464)
C3': (-1.705,61.494,115.333)
C1': (-3.377,61.562,116.962)
C5': (-0.224,63.217,116.525)
O4': (-2.245,62.248,117.477)
C8: (-5.597,62.229,115.931)
O2': (-2.412,59.450,116.401)
C6: (-5.697,65.720,115.539)
C5: (-5.497,64.346,115.764)
C4: (-4.289,63.952,116.336)
P: (0.563,65.186,118.071)
C4': (-1.085,61.980,116.634)
C2': (-2.873,60.664,115.832)
C2: (-3.599,66.081,116.439)
N1: (-4.715,66.584,115.893)
N3: (-3.297,64.806,116.700)
N6: (-6.814,66.197,114.995)
N7: (-6.311,63.251,115.512)
N9: (-4.365,62.557,116.465)
O5': (0.255,63.643,117.790)
O3': (-0.800,60.795,114.497)
Image (generated by PyMOL):