ClaRNA

Doublet info:

Details

Nucleotide types: AG
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YIJ:01077:01078

Extra

PDB:
ATOM 1 O3' A A1076 36.333 105.373 144.126 1.00 38.57 O
ATOM 2 P A A1077 37.840 105.660 144.605 1.00 42.91 P
ATOM 3 OP1 A A1077 38.228 104.619 145.596 1.00 42.45 O
ATOM 4 OP2 A A1077 37.935 107.095 144.967 1.00 43.01 O
ATOM 5 O5' A A1077 38.717 105.401 143.299 1.00 43.16 O
ATOM 6 C5' A A1077 38.599 106.259 142.156 1.00 42.01 C
ATOM 7 C4' A A1077 39.323 105.666 140.972 1.00 41.60 C
ATOM 8 O4' A A1077 38.752 104.365 140.625 1.00 41.55 O
ATOM 9 C3' A A1077 39.183 106.482 139.696 1.00 40.08 C
ATOM 10 O3' A A1077 40.022 107.603 139.602 1.00 38.96 O
ATOM 11 C2' A A1077 39.341 105.429 138.617 1.00 40.65 C
ATOM 12 O2' A A1077 40.678 105.023 138.425 1.00 39.20 O
ATOM 13 C1' A A1077 38.482 104.322 139.228 1.00 40.75 C
ATOM 14 N9 A A1077 37.067 104.657 139.045 1.00 41.30 N
ATOM 15 C8 A A1077 36.479 105.912 138.953 1.00 42.28 C
ATOM 16 N7 A A1077 35.182 105.884 138.785 1.00 40.00 N
ATOM 17 C5 A A1077 34.891 104.535 138.772 1.00 41.14 C
ATOM 18 C6 A A1077 33.695 103.858 138.642 1.00 43.35 C
ATOM 19 N6 A A1077 32.521 104.466 138.514 1.00 44.11 N
ATOM 20 N1 A A1077 33.738 102.511 138.654 1.00 47.64 N
ATOM 21 C2 A A1077 34.935 101.904 138.804 1.00 46.57 C
ATOM 22 N3 A A1077 36.137 102.437 138.954 1.00 40.27 N
ATOM 23 C4 A A1077 36.045 103.769 138.926 1.00 40.54 C
ATOM 24 P G A1078 39.361 109.042 139.337 1.00 41.53 P
ATOM 25 OP1 G A1078 40.484 110.002 139.129 1.00 41.54 O
ATOM 26 OP2 G A1078 38.348 109.312 140.396 1.00 43.05 O
ATOM 27 O5' G A1078 38.600 108.852 137.950 1.00 39.31 O
TER

ATOM 1 O3' A B1077 40.022 107.603 139.602 1.00 38.96 O
ATOM 2 P G B1078 39.361 109.042 139.337 1.00 41.53 P
ATOM 3 OP1 G B1078 40.484 110.002 139.129 1.00 41.54 O
ATOM 4 OP2 G B1078 38.348 109.312 140.396 1.00 43.05 O
ATOM 5 O5' G B1078 38.600 108.852 137.950 1.00 39.31 O
ATOM 6 C5' G B1078 37.171 108.932 137.850 1.00 35.38 C
ATOM 7 C4' G B1078 36.740 108.450 136.491 1.00 35.15 C
ATOM 8 O4' G B1078 35.290 108.416 136.385 1.00 35.14 O
ATOM 9 C3' G B1078 37.219 109.314 135.331 1.00 35.57 C
ATOM 10 O3' G B1078 37.438 108.462 134.217 1.00 38.11 O
ATOM 11 C2' G B1078 36.015 110.204 135.061 1.00 33.98 C
ATOM 12 O2' G B1078 35.987 110.719 133.748 1.00 35.15 O
ATOM 13 C1' G B1078 34.887 109.204 135.284 1.00 33.02 C
ATOM 14 N9 G B1078 33.548 109.725 135.539 1.00 31.15 N
ATOM 15 C8 G B1078 33.165 111.007 135.851 1.00 30.86 C
ATOM 16 N7 G B1078 31.872 111.134 135.974 1.00 31.04 N
ATOM 17 C5 G B1078 31.380 109.857 135.736 1.00 28.10 C
ATOM 18 C6 G B1078 30.054 109.367 135.721 1.00 27.39 C
ATOM 19 O6 G B1078 29.005 109.987 135.880 1.00 30.88 O
ATOM 20 N1 G B1078 30.016 108.005 135.472 1.00 26.01 N
ATOM 21 C2 G B1078 31.110 107.222 135.245 1.00 27.50 C
ATOM 22 N2 G B1078 30.896 105.937 135.045 1.00 23.26 N
ATOM 23 N3 G B1078 32.340 107.669 135.225 1.00 30.00 N
ATOM 24 C4 G B1078 32.402 108.983 135.482 1.00 28.72 C
ATOM 25 P U B1079 38.932 108.057 133.812 1.00 40.54 P
ATOM 26 OP1 U B1079 39.874 109.064 134.384 1.00 41.97 O
ATOM 27 OP2 U B1079 38.910 107.817 132.345 1.00 39.48 O
ATOM 28 O5' U B1079 39.162 106.664 134.537 1.00 34.74 O
TER

Atoms:
OP1: (38.228,104.619,145.596)
OP2: (37.935,107.095,144.967)
C3': (39.183,106.482,139.696)
C1': (38.482,104.322,139.228)
C5': (38.599,106.259,142.156)
O4': (38.752,104.365,140.625)
C8: (36.479,105.912,138.953)
O2': (40.678,105.023,138.425)
C6: (33.695,103.858,138.642)
C5: (34.891,104.535,138.772)
C4: (36.045,103.769,138.926)
P: (37.840,105.660,144.605)
C4': (39.323,105.666,140.972)
C2': (39.341,105.429,138.617)
C2: (34.935,101.904,138.804)
N1: (33.738,102.511,138.654)
N3: (36.137,102.437,138.954)
N6: (32.521,104.466,138.514)
N7: (35.182,105.884,138.785)
N9: (37.067,104.657,139.045)
O5': (38.717,105.401,143.299)
O3': (40.022,107.603,139.602)
OP1: (40.484,110.002,139.129)
OP2: (38.348,109.312,140.396)
C3': (37.219,109.314,135.331)
C1': (34.887,109.204,135.284)
C5': (37.171,108.932,137.850)
O6: (29.005,109.987,135.880)
O4': (35.290,108.416,136.385)
C8: (33.165,111.007,135.851)
C2: (31.110,107.222,135.245)
C6: (30.054,109.367,135.721)
C5: (31.380,109.857,135.736)
C4: (32.402,108.983,135.482)
P: (39.361,109.042,139.337)
C4': (36.740,108.450,136.491)
C2': (36.015,110.204,135.061)
O2': (35.987,110.719,133.748)
N1: (30.016,108.005,135.472)
N2: (30.896,105.937,135.045)
N3: (32.340,107.669,135.225)
N7: (31.872,111.134,135.974)
N9: (33.548,109.725,135.539)
O5': (38.600,108.852,137.950)
O3': (37.438,108.462,134.217)
Image (generated by PyMOL):
PyMOL image
show in jmol